Translation
Transformers
PyTorch
t5
text2text-generation
chemistry
biology
text-generation-inference
Instructions to use AI4PD/REXzyme with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- Transformers
How to use AI4PD/REXzyme with Transformers:
# Use a pipeline as a high-level helper # Warning: Pipeline type "translation" is no longer supported in transformers v5. # You must load the model directly (see below) or downgrade to v4.x with: # 'pip install "transformers<5.0.0' from transformers import pipeline pipe = pipeline("translation", model="AI4PD/REXzyme")# Load model directly from transformers import AutoTokenizer, AutoModelForSeq2SeqLM tokenizer = AutoTokenizer.from_pretrained("AI4PD/REXzyme") model = AutoModelForSeq2SeqLM.from_pretrained("AI4PD/REXzyme") - Notebooks
- Google Colab
- Kaggle
Update README.md
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README.md
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# **Contributors**
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- Sebastian Lindner (GitHub [@Bienenwolf655](https://github.com/Bienenwolf655); Twitter [@lindner_seb](https://twitter.com/lindner_seb))
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- Michael Heinzinger (GitHub [@mheinzinger](https://github.com/mheinzinger); Twitter [@HeinzingerM](https://twitter.com/HeinzingerM))
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- Noelia Ferruz (GitHub [@noeliaferruz](https://github.com/noeliaferruz); Twitter [@ferruz_noelia](https://twitter.com/ferruz_noelia); Webpage: [www.aiproteindesign.com](https://www.aiproteindesign.com) )
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## **A word of caution**
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- We have not yet fully tested the ability of the model for the generation of new-to-nature enzymes, i.e.,
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with chemical reactions that do not appear in Nature (and hence neither in the training set). While this is the intended objective of our work, it is very much work in progress. We'll uptadate the model and documentation shortly.
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# **Contributors**
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- Sebastian Lindner (GitHub [@Bienenwolf655](https://github.com/Bienenwolf655); Twitter [@lindner_seb](https://twitter.com/lindner_seb))
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- Núria Mimbrero Pelegrí (GitHub [@nuriamimbreropelegri](https://github.com/nuriamimbreropelegri);)
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- Michael Heinzinger (GitHub [@mheinzinger](https://github.com/mheinzinger); Twitter [@HeinzingerM](https://twitter.com/HeinzingerM))
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- Noelia Ferruz (GitHub [@noeliaferruz](https://github.com/noeliaferruz); Twitter [@ferruz_noelia](https://twitter.com/ferruz_noelia); Webpage: [www.aiproteindesign.com](https://www.aiproteindesign.com) )
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## **A word of caution**
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- We have not yet fully tested the ability of the model for the generation of new-to-nature enzymes, i.e.,
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with chemical reactions that do not appear in Nature (and hence neither in the training set). While this is the intended objective of our work, it is very much work in progress. We'll uptadate the model and documentation shortly.
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## **Latest checkpoint of the model**
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- Please use checkpoint-316500 for the latest parameters
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