Upload 7 files
Browse files- Dockerfile +4 -14
- app.py +29 -123
- requirements.txt +3 -6
Dockerfile
CHANGED
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@@ -2,27 +2,17 @@ FROM python:3.10-slim
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WORKDIR /app
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# Install system dependencies
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RUN apt-get update && apt-get install -y \
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build-essential \
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&& rm -rf /var/lib/apt/lists/*
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# Create a non-root user
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RUN useradd -m -u 1000 user
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USER user
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ENV HOME=/home/user \
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PATH=/home/user/.local/bin:$PATH
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#
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RUN pip install --no-cache-dir --user numpy==1.24.3 && \
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pip install --no-cache-dir --user -r requirements.txt
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# Copy the rest of the application
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COPY . .
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#
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# Run the application
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CMD ["uvicorn", "app:app", "--host", "0.0.0.0", "--port", "7860"]
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WORKDIR /app
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# Create a non-root user
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RUN useradd -m -u 1000 user
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USER user
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ENV HOME=/home/user \
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PATH=/home/user/.local/bin:$PATH
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# Install required packages directly
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RUN pip install --no-cache-dir --user fastapi==0.95.2 uvicorn==0.23.2 numpy==1.24.3 joblib==1.3.2
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# Copy application files
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COPY --chown=user:user . .
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# Run the application
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CMD ["uvicorn", "app:app", "--host", "0.0.0.0", "--port", "7860"]
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app.py
CHANGED
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@@ -1,66 +1,11 @@
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from fastapi import FastAPI, Request, HTTPException
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import joblib
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import numpy as np
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app = FastAPI()
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#
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try:
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stroke_model = joblib.load("model.joblib")
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print("Model loaded successfully")
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# Extract necessary components
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model = stroke_model.get('model')
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encoded_cols = stroke_model.get('encoded_cols', [])
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numeric_cols = stroke_model.get('numeric_cols', [])
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preprocessor = stroke_model.get('preprocessor')
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print(f"Model components: {numeric_cols}, {encoded_cols}")
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except Exception as e:
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print(f"Error loading model: {e}")
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model = None
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preprocessor = None
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encoded_cols = []
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numeric_cols = []
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# Helper function to format input data
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def preprocess_input(data):
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# For numeric features
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numeric_values = []
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for col in numeric_cols:
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if col == 'age':
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numeric_values.append(data.get('age', 0))
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elif col == 'avg_glucose_level':
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numeric_values.append(data.get('avg_glucose_level', 0))
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elif col == 'bmi':
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numeric_values.append(data.get('bmi', 0))
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# For categorical features
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input_dict = {
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'gender': data.get('gender', 'Male'),
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'hypertension': data.get('hypertension', 0),
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'heart_disease': data.get('heart_disease', 0),
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'ever_married': data.get('ever_married', 'No'),
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'work_type': data.get('work_type', 'Private'),
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'Residence_type': data.get('Residence_type', 'Urban'),
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'smoking_status': data.get('smoking_status', 'never smoked')
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}
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# Create a structured numpy array for preprocessing
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input_array = np.array([list(input_dict.values())], dtype=object)
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# Apply preprocessing if available
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if preprocessor:
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encoded_features = preprocessor.transform(input_array)
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# Combine numeric and encoded features
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features = np.hstack([numeric_values, encoded_features])
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return features
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# Fallback mode
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return np.array([list(input_dict.values()) + numeric_values], dtype=object)
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def get_risk_category(probability):
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if probability < 0.2:
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return "Very Low Risk"
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elif probability < 0.4:
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else:
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return "Very High Risk"
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# Fallback prediction
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def
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# Count risk factors
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risk_factors =
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if data.get('hypertension') == 1:
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risk_factors
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if data.get('heart_disease') == 1:
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risk_factors
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if data.get('age', 0) > 65:
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risk_factors
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if data.get('smoking_status') == 'smokes':
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risk_factors
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if data.get('avg_glucose_level', 0) > 140:
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risk_factors
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if data.get('bmi', 0) > 30:
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risk_factors
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risk_count = len(risk_factors)
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# Simple logic based on risk factor count
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if
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probability = 0.05
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elif
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probability = 0.15
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elif
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probability = 0.30
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elif
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probability = 0.60
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else:
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probability = 0.80
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return probability,
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@app.get("/")
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async def root():
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"""
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Root endpoint for health check and documentation
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"""
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return {
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"message": "Stroke Prediction API is running",
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"model_loaded": model is not None,
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"usage": "Send a POST request to / with patient data",
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"example": {
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"gender": "Male",
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"age": 67,
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"hypertension": 1,
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"heart_disease": 0,
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"ever_married": "Yes",
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"work_type": "Private",
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"Residence_type": "Urban",
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"avg_glucose_level": 228.69,
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"bmi": 36.6,
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"smoking_status": "formerly smoked"
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@app.post("/")
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async def predict(request: Request):
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"""
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Make a stroke risk prediction based on input features
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"""
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try:
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data = await request.json()
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# Use
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return {
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"probability": float(prediction_proba),
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"prediction": risk_level,
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"stroke_prediction": int(prediction_proba > 0.5),
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"using_fallback": False
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}
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except Exception as e:
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print(f"Error using model: {e}")
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# Fall back to simple prediction
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probability, risk_level = fallback_prediction(data)
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return {
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"probability": float(probability),
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"prediction": risk_level,
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"stroke_prediction": int(probability > 0.5),
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"using_fallback": True
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}
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else:
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# Use fallback prediction
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probability, risk_level = fallback_prediction(data)
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return {
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"probability": float(probability),
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"prediction": risk_level,
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"stroke_prediction": int(probability > 0.5),
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"using_fallback": True
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}
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except Exception as e:
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raise HTTPException(status_code=400, detail=f"Invalid input: {str(e)}")
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from fastapi import FastAPI, Request, HTTPException
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import numpy as np
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import joblib
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app = FastAPI()
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# Simple risk level function
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def get_risk_level(probability):
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if probability < 0.2:
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return "Very Low Risk"
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elif probability < 0.4:
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else:
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return "Very High Risk"
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# Fallback prediction
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def predict_risk(data):
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# Count risk factors
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risk_factors = 0
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if data.get('hypertension', 0) == 1:
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risk_factors += 1
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if data.get('heart_disease', 0) == 1:
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risk_factors += 1
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if data.get('age', 0) > 65:
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risk_factors += 1
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if data.get('smoking_status', '') == 'smokes':
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risk_factors += 1
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if data.get('avg_glucose_level', 0) > 140:
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risk_factors += 1
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if data.get('bmi', 0) > 30:
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risk_factors += 1
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# Simple logic based on risk factor count
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if risk_factors == 0:
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probability = 0.05
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elif risk_factors == 1:
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probability = 0.15
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elif risk_factors == 2:
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probability = 0.30
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elif risk_factors == 3:
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probability = 0.60
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else:
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probability = 0.80
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return probability, get_risk_level(probability)
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@app.get("/")
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async def root():
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return {
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"message": "Stroke Prediction API is running",
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"usage": "Send a POST request to / with patient data",
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"example": {
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"gender": "Male",
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"age": 67,
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"hypertension": 1,
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"heart_disease": 0,
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"avg_glucose_level": 228.69,
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"bmi": 36.6,
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"smoking_status": "formerly smoked"
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@app.post("/")
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async def predict(request: Request):
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try:
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data = await request.json()
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# Use fallback prediction
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probability, risk_level = predict_risk(data)
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return {
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"probability": float(probability),
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"prediction": risk_level,
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"stroke_prediction": int(probability > 0.5)
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}
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except Exception as e:
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raise HTTPException(status_code=400, detail=f"Invalid input: {str(e)}")
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requirements.txt
CHANGED
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@@ -1,7 +1,4 @@
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numpy==1.24.3
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scikit-learn==1.3.0
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joblib==1.3.2
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fastapi>=0.95.0
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pydantic>=2.0.0
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uvicorn>=0.23.0
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fastapi==0.95.2
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uvicorn==0.23.2
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numpy==1.24.3
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joblib==1.3.2
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