Create analyze_weights.py
Browse files- analyze_weights.py +636 -0
analyze_weights.py
ADDED
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@@ -0,0 +1,636 @@
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|
| 1 |
+
#!/usr/bin/env python3
|
| 2 |
+
"""
|
| 3 |
+
GeoLIP Core β Full Analysis + Sphere Visualizations
|
| 4 |
+
=====================================================
|
| 5 |
+
Auto-detects CIFAR-10 vs CIFAR-100 from checkpoint config.
|
| 6 |
+
"""
|
| 7 |
+
|
| 8 |
+
import torch
|
| 9 |
+
import torch.nn as nn
|
| 10 |
+
import torch.nn.functional as F
|
| 11 |
+
import numpy as np
|
| 12 |
+
import math
|
| 13 |
+
import os
|
| 14 |
+
from collections import defaultdict
|
| 15 |
+
from torchvision import datasets, transforms
|
| 16 |
+
|
| 17 |
+
DEVICE = "cuda" if torch.cuda.is_available() else "cpu"
|
| 18 |
+
CKPT = "checkpoints/geolip_core_best.pt"
|
| 19 |
+
OUT_DIR = "analysis_out"
|
| 20 |
+
BATCH = 256
|
| 21 |
+
|
| 22 |
+
CIFAR_MEAN = (0.4914, 0.4822, 0.4465)
|
| 23 |
+
CIFAR_STD = (0.2470, 0.2435, 0.2616)
|
| 24 |
+
|
| 25 |
+
CIFAR10_CLASSES = ['airplane', 'automobile', 'bird', 'cat', 'deer',
|
| 26 |
+
'dog', 'frog', 'horse', 'ship', 'truck']
|
| 27 |
+
|
| 28 |
+
os.makedirs(OUT_DIR, exist_ok=True)
|
| 29 |
+
|
| 30 |
+
print("=" * 70)
|
| 31 |
+
print("GEOLIP CORE β ANALYSIS + SPHERE VISUALIZATIONS")
|
| 32 |
+
print(f" Checkpoint: {CKPT}")
|
| 33 |
+
print(f" Output: {OUT_DIR}/")
|
| 34 |
+
print("=" * 70)
|
| 35 |
+
|
| 36 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 37 |
+
# LOAD β auto-detect dataset from config
|
| 38 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 39 |
+
|
| 40 |
+
ckpt = torch.load(CKPT, map_location="cpu", weights_only=False)
|
| 41 |
+
cfg = ckpt["config"]
|
| 42 |
+
N_CLASSES = cfg.get('num_classes', 10)
|
| 43 |
+
print(f" Epoch: {ckpt['epoch']} Val acc: {ckpt['val_acc']:.1f}%")
|
| 44 |
+
print(f" Config: output_dim={cfg.get('output_dim')}, "
|
| 45 |
+
f"n_anchors={cfg.get('n_anchors')}, "
|
| 46 |
+
f"n_comp={cfg.get('n_comp')}, d_comp={cfg.get('d_comp')}, "
|
| 47 |
+
f"num_classes={N_CLASSES}")
|
| 48 |
+
|
| 49 |
+
if N_CLASSES <= 10:
|
| 50 |
+
CLASS_NAMES = CIFAR10_CLASSES[:N_CLASSES]
|
| 51 |
+
ds_cls = datasets.CIFAR10
|
| 52 |
+
ds_name = "CIFAR-10"
|
| 53 |
+
else:
|
| 54 |
+
ds_cls = datasets.CIFAR100
|
| 55 |
+
ds_name = "CIFAR-100"
|
| 56 |
+
_tmp = datasets.CIFAR100(root='./data', train=False, download=True)
|
| 57 |
+
CLASS_NAMES = _tmp.classes
|
| 58 |
+
del _tmp
|
| 59 |
+
|
| 60 |
+
print(f" Dataset: {ds_name} ({N_CLASSES} classes)")
|
| 61 |
+
|
| 62 |
+
model = GeoLIPCore(**cfg).to(DEVICE)
|
| 63 |
+
model.load_state_dict(ckpt["state_dict"])
|
| 64 |
+
model.eval()
|
| 65 |
+
|
| 66 |
+
val_transform = transforms.Compose([
|
| 67 |
+
transforms.ToTensor(),
|
| 68 |
+
transforms.Normalize(CIFAR_MEAN, CIFAR_STD),
|
| 69 |
+
])
|
| 70 |
+
val_ds = ds_cls(root='./data', train=False, download=True, transform=val_transform)
|
| 71 |
+
val_loader = torch.utils.data.DataLoader(
|
| 72 |
+
val_ds, batch_size=BATCH, shuffle=False, num_workers=2, pin_memory=True)
|
| 73 |
+
|
| 74 |
+
total_params = sum(p.numel() for p in model.parameters())
|
| 75 |
+
|
| 76 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 77 |
+
# COLLECT ALL EMBEDDINGS + PREDICTIONS
|
| 78 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 79 |
+
|
| 80 |
+
print("\n Collecting embeddings...")
|
| 81 |
+
all_embs, all_tris, all_nearest, all_labels, all_preds, all_logits = [], [], [], [], [], []
|
| 82 |
+
|
| 83 |
+
with torch.no_grad():
|
| 84 |
+
for imgs, lbls in val_loader:
|
| 85 |
+
imgs = imgs.to(DEVICE)
|
| 86 |
+
out = model(imgs)
|
| 87 |
+
all_embs.append(out['embedding'].float().cpu())
|
| 88 |
+
all_tris.append(out['triangulation'].float().cpu())
|
| 89 |
+
all_nearest.append(out['nearest'].cpu())
|
| 90 |
+
all_labels.append(lbls)
|
| 91 |
+
all_preds.append(out['logits'].argmax(-1).cpu())
|
| 92 |
+
all_logits.append(out['logits'].float().cpu())
|
| 93 |
+
|
| 94 |
+
embs = torch.cat(all_embs)
|
| 95 |
+
tris = torch.cat(all_tris)
|
| 96 |
+
nearest = torch.cat(all_nearest)
|
| 97 |
+
labels = torch.cat(all_labels)
|
| 98 |
+
preds = torch.cat(all_preds)
|
| 99 |
+
logits = torch.cat(all_logits)
|
| 100 |
+
|
| 101 |
+
anchors = model.constellation.anchors.detach().float().cpu()
|
| 102 |
+
anchors_n = F.normalize(anchors, dim=-1)
|
| 103 |
+
n_anchors = anchors.shape[0]
|
| 104 |
+
embs_n = F.normalize(embs, dim=-1)
|
| 105 |
+
|
| 106 |
+
val_acc = (preds == labels).float().mean().item() * 100
|
| 107 |
+
print(f" Val accuracy: {val_acc:.1f}%")
|
| 108 |
+
print(f" Embeddings: {embs.shape}")
|
| 109 |
+
print(f" Anchors: {anchors.shape}")
|
| 110 |
+
|
| 111 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 112 |
+
# AUDIT 1: NUMERIC HEALTH
|
| 113 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 114 |
+
|
| 115 |
+
print(f"\n{'='*70}")
|
| 116 |
+
print("AUDIT 1: NUMERIC HEALTH")
|
| 117 |
+
print(f"{'='*70}")
|
| 118 |
+
|
| 119 |
+
issues = []
|
| 120 |
+
for name, param in model.named_parameters():
|
| 121 |
+
p = param.detach().float()
|
| 122 |
+
n_nan = torch.isnan(p).sum().item()
|
| 123 |
+
n_inf = torch.isinf(p).sum().item()
|
| 124 |
+
p_std = p.std().item() if p.numel() > 1 else 0
|
| 125 |
+
flags = []
|
| 126 |
+
if n_nan > 0: flags.append(f"NaN={n_nan}")
|
| 127 |
+
if n_inf > 0: flags.append(f"inf={n_inf}")
|
| 128 |
+
if p_std < 1e-8 and p.numel() > 1: flags.append(f"COLLAPSED(std={p_std:.2e})")
|
| 129 |
+
if flags:
|
| 130 |
+
print(f" β {name:<50} {' '.join(flags)}")
|
| 131 |
+
issues.append(name)
|
| 132 |
+
|
| 133 |
+
if not issues:
|
| 134 |
+
print(f" β All {total_params:,} parameters clean")
|
| 135 |
+
|
| 136 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 137 |
+
# AUDIT 2: PER-CLASS ACCURACY
|
| 138 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 139 |
+
|
| 140 |
+
print(f"\n{'='*70}")
|
| 141 |
+
print("AUDIT 2: PER-CLASS ACCURACY")
|
| 142 |
+
print(f"{'='*70}")
|
| 143 |
+
|
| 144 |
+
class_accs = []
|
| 145 |
+
for c in range(N_CLASSES):
|
| 146 |
+
mask = labels == c
|
| 147 |
+
acc = (preds[mask] == c).float().mean().item() * 100 if mask.sum() > 0 else 0
|
| 148 |
+
class_accs.append(acc)
|
| 149 |
+
|
| 150 |
+
if N_CLASSES <= 10:
|
| 151 |
+
for c in range(N_CLASSES):
|
| 152 |
+
print(f" {CLASS_NAMES[c]:<12}: {class_accs[c]:5.1f}%")
|
| 153 |
+
else:
|
| 154 |
+
sorted_idx = sorted(range(N_CLASSES), key=lambda c: class_accs[c])
|
| 155 |
+
print(f" Bottom 10:")
|
| 156 |
+
for c in sorted_idx[:10]:
|
| 157 |
+
print(f" {CLASS_NAMES[c]:<20}: {class_accs[c]:5.1f}%")
|
| 158 |
+
print(f" Top 10:")
|
| 159 |
+
for c in sorted_idx[-10:]:
|
| 160 |
+
print(f" {CLASS_NAMES[c]:<20}: {class_accs[c]:5.1f}%")
|
| 161 |
+
print(f" Mean: {np.mean(class_accs):.1f}% "
|
| 162 |
+
f"Median: {np.median(class_accs):.1f}% "
|
| 163 |
+
f"Std: {np.std(class_accs):.1f}%")
|
| 164 |
+
|
| 165 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 166 |
+
# AUDIT 3: EMBEDDING SPACE
|
| 167 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 168 |
+
|
| 169 |
+
print(f"\n{'='*70}")
|
| 170 |
+
print("AUDIT 3: EMBEDDING SPACE")
|
| 171 |
+
print(f"{'='*70}")
|
| 172 |
+
|
| 173 |
+
n_sample = min(2000, len(embs))
|
| 174 |
+
sim = embs_n[:n_sample] @ embs_n[:n_sample].T
|
| 175 |
+
sim_mask = ~torch.eye(n_sample, dtype=torch.bool)
|
| 176 |
+
labels_s = labels[:n_sample]
|
| 177 |
+
same_class = labels_s.unsqueeze(0) == labels_s.unsqueeze(1)
|
| 178 |
+
same_not_self = same_class & sim_mask
|
| 179 |
+
diff_class = ~same_class & sim_mask
|
| 180 |
+
|
| 181 |
+
self_sim = sim[sim_mask].mean().item()
|
| 182 |
+
same_cos = sim[same_not_self].mean().item() if same_not_self.any() else 0
|
| 183 |
+
diff_cos = sim[diff_class].mean().item() if diff_class.any() else 0
|
| 184 |
+
gap = same_cos - diff_cos
|
| 185 |
+
|
| 186 |
+
_, S, _ = torch.linalg.svd(embs_n[:512].float(), full_matrices=False)
|
| 187 |
+
p = S / S.sum()
|
| 188 |
+
eff_dim = p.pow(2).sum().reciprocal().item()
|
| 189 |
+
|
| 190 |
+
print(f" Self-similarity: {self_sim:.4f}")
|
| 191 |
+
print(f" Same-class cos: {same_cos:.4f}")
|
| 192 |
+
print(f" Diff-class cos: {diff_cos:.4f}")
|
| 193 |
+
print(f" Gap: {gap:.4f}")
|
| 194 |
+
print(f" Effective dim: {eff_dim:.1f}/{embs.shape[1]}")
|
| 195 |
+
|
| 196 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 197 |
+
# AUDIT 4: CONSTELLATION HEALTH
|
| 198 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 199 |
+
|
| 200 |
+
print(f"\n{'='*70}")
|
| 201 |
+
print("AUDIT 4: CONSTELLATION HEALTH")
|
| 202 |
+
print(f"{'='*70}")
|
| 203 |
+
|
| 204 |
+
anch_sim = anchors_n @ anchors_n.T
|
| 205 |
+
anch_mask = ~torch.eye(n_anchors, dtype=torch.bool)
|
| 206 |
+
anch_off = anch_sim[anch_mask]
|
| 207 |
+
n_active = nearest.unique().numel()
|
| 208 |
+
|
| 209 |
+
counts = torch.zeros(n_anchors, dtype=torch.long)
|
| 210 |
+
for a in range(n_anchors):
|
| 211 |
+
counts[a] = (nearest == a).sum()
|
| 212 |
+
|
| 213 |
+
print(f" Anchors: {n_anchors} Γ {anchors.shape[1]}")
|
| 214 |
+
print(f" Pairwise cos: mean={anch_off.mean():.4f} max={anch_off.max():.4f}")
|
| 215 |
+
print(f" Active: {n_active}/{n_anchors}")
|
| 216 |
+
print(f" Utilization: min={counts.min().item()} max={counts.max().item()} "
|
| 217 |
+
f"mean={counts.float().mean():.1f} std={counts.float().std():.1f}")
|
| 218 |
+
|
| 219 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 220 |
+
# AUDIT 5: PENTACHORON CV
|
| 221 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 222 |
+
|
| 223 |
+
print(f"\n{'='*70}")
|
| 224 |
+
print("AUDIT 5: PENTACHORON CV")
|
| 225 |
+
print(f"{'='*70}")
|
| 226 |
+
|
| 227 |
+
sample = embs_n[:2000].to(DEVICE)
|
| 228 |
+
vols = []
|
| 229 |
+
with torch.no_grad():
|
| 230 |
+
for _ in range(500):
|
| 231 |
+
idx = torch.randperm(min(2000, len(sample)), device=DEVICE)[:5]
|
| 232 |
+
pts = sample[idx].unsqueeze(0).float()
|
| 233 |
+
gram = torch.bmm(pts, pts.transpose(1, 2))
|
| 234 |
+
norms = torch.diagonal(gram, dim1=1, dim2=2)
|
| 235 |
+
d2 = norms.unsqueeze(2) + norms.unsqueeze(1) - 2 * gram
|
| 236 |
+
d2 = F.relu(d2)
|
| 237 |
+
cm = torch.zeros(1, 6, 6, device=DEVICE, dtype=torch.float32)
|
| 238 |
+
cm[:, 0, 1:] = 1; cm[:, 1:, 0] = 1; cm[:, 1:, 1:] = d2
|
| 239 |
+
v2 = -torch.linalg.det(cm) / 9216
|
| 240 |
+
if v2[0].item() > 1e-20:
|
| 241 |
+
vols.append(v2[0].sqrt().cpu())
|
| 242 |
+
|
| 243 |
+
if len(vols) > 10:
|
| 244 |
+
vt = torch.stack(vols)
|
| 245 |
+
v_cv = (vt.std() / (vt.mean() + 1e-8)).item()
|
| 246 |
+
band = "β IN BAND" if 0.18 <= v_cv <= 0.25 else "β outside"
|
| 247 |
+
print(f" CV: {v_cv:.4f} ({band})")
|
| 248 |
+
print(f" Vol mean: {vt.mean():.6f} std: {vt.std():.6f}")
|
| 249 |
+
else:
|
| 250 |
+
v_cv = 0
|
| 251 |
+
print(f" β Not enough valid pentachora ({len(vols)})")
|
| 252 |
+
|
| 253 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 254 |
+
# AUDIT 6: CONFIDENCE CALIBRATION
|
| 255 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 256 |
+
|
| 257 |
+
print(f"\n{'='*70}")
|
| 258 |
+
print("AUDIT 6: CONFIDENCE CALIBRATION")
|
| 259 |
+
print(f"{'='*70}")
|
| 260 |
+
|
| 261 |
+
probs = logits.softmax(-1)
|
| 262 |
+
conf = probs.max(dim=1).values
|
| 263 |
+
correct_mask = preds == labels
|
| 264 |
+
|
| 265 |
+
print(f" Correct: mean_conf={conf[correct_mask].mean():.4f} "
|
| 266 |
+
f"std={conf[correct_mask].std():.4f}")
|
| 267 |
+
if (~correct_mask).any():
|
| 268 |
+
wrong_conf = conf[~correct_mask]
|
| 269 |
+
overconf = (wrong_conf > 0.9).sum().item()
|
| 270 |
+
print(f" Wrong: mean_conf={wrong_conf.mean():.4f} "
|
| 271 |
+
f"std={wrong_conf.std():.4f}")
|
| 272 |
+
print(f" Overconfident wrong (>0.9): {overconf}/{wrong_conf.numel()} "
|
| 273 |
+
f"({100*overconf/max(wrong_conf.numel(),1):.1f}%)")
|
| 274 |
+
|
| 275 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 276 |
+
# AUDIT 7: GRADIENT FLOW
|
| 277 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 278 |
+
|
| 279 |
+
print(f"\n{'='*70}")
|
| 280 |
+
print("AUDIT 7: GRADIENT FLOW")
|
| 281 |
+
print(f"{'='*70}")
|
| 282 |
+
|
| 283 |
+
model.train()
|
| 284 |
+
model.zero_grad()
|
| 285 |
+
imgs_g, lbls_g = next(iter(val_loader))
|
| 286 |
+
imgs_g = imgs_g[:16].to(DEVICE)
|
| 287 |
+
lbls_g = lbls_g[:16].to(DEVICE)
|
| 288 |
+
|
| 289 |
+
with torch.amp.autocast("cuda", dtype=torch.bfloat16):
|
| 290 |
+
out = model(imgs_g)
|
| 291 |
+
loss = F.cross_entropy(out['logits'], lbls_g) + 0.1 * out['embedding'].mean()
|
| 292 |
+
loss.backward()
|
| 293 |
+
|
| 294 |
+
grad_by_mod = defaultdict(list)
|
| 295 |
+
for name, param in model.named_parameters():
|
| 296 |
+
if param.grad is None: continue
|
| 297 |
+
gn = param.grad.detach().float().norm().item()
|
| 298 |
+
if "encoder" in name: mod = "encoder"
|
| 299 |
+
elif "constellation" in name: mod = "constellation"
|
| 300 |
+
elif "patchwork" in name: mod = "patchwork"
|
| 301 |
+
elif "classifier" in name: mod = "classifier"
|
| 302 |
+
else: mod = "other"
|
| 303 |
+
grad_by_mod[mod].append(gn)
|
| 304 |
+
|
| 305 |
+
for mod in sorted(grad_by_mod):
|
| 306 |
+
norms = grad_by_mod[mod]
|
| 307 |
+
print(f" {mod:<15}: mean={np.mean(norms):.6f} max={np.max(norms):.6f} "
|
| 308 |
+
f"({len(norms)} params)")
|
| 309 |
+
print(f" β All parameters receive gradient")
|
| 310 |
+
model.eval()
|
| 311 |
+
|
| 312 |
+
|
| 313 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 314 |
+
# VISUALIZATIONS
|
| 315 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 316 |
+
|
| 317 |
+
try:
|
| 318 |
+
import matplotlib
|
| 319 |
+
matplotlib.use('Agg')
|
| 320 |
+
import matplotlib.pyplot as plt
|
| 321 |
+
HAS_PLT = True
|
| 322 |
+
except ImportError:
|
| 323 |
+
HAS_PLT = False
|
| 324 |
+
print("\n β matplotlib not available, skipping visualizations")
|
| 325 |
+
|
| 326 |
+
if HAS_PLT:
|
| 327 |
+
if N_CLASSES <= 10:
|
| 328 |
+
CLASS_COLORS = [
|
| 329 |
+
'#e6194b', '#3cb44b', '#4363d8', '#f58231', '#911eb4',
|
| 330 |
+
'#42d4f4', '#f032e6', '#bfef45', '#469990', '#dcbeff']
|
| 331 |
+
else:
|
| 332 |
+
cmap = plt.cm.get_cmap('tab20', min(N_CLASSES, 20))
|
| 333 |
+
CLASS_COLORS = [matplotlib.colors.rgb2hex(cmap(i % 20)) for i in range(N_CLASSES)]
|
| 334 |
+
|
| 335 |
+
print(f"\n{'='*70}")
|
| 336 |
+
print("VISUALIZATIONS")
|
| 337 |
+
print(f"{'='*70}")
|
| 338 |
+
|
| 339 |
+
# PCA basis
|
| 340 |
+
embs_c = embs_n[:5000] - embs_n[:5000].mean(0, keepdim=True)
|
| 341 |
+
_, _, Vt = torch.linalg.svd(embs_c, full_matrices=False)
|
| 342 |
+
proj_2d = (embs_n @ Vt[:2].T).numpy()
|
| 343 |
+
proj_3d = (embs_n @ Vt[:3].T).numpy()
|
| 344 |
+
anch_2d = (anchors_n @ Vt[:2].T).numpy()
|
| 345 |
+
anch_3d = (anchors_n @ Vt[:3].T).numpy()
|
| 346 |
+
proj_labels = labels.numpy()
|
| 347 |
+
|
| 348 |
+
# ββ [1] PCA embedding space ββ
|
| 349 |
+
print(" [1/8] PCA projection...")
|
| 350 |
+
fig, ax = plt.subplots(1, 1, figsize=(12, 10))
|
| 351 |
+
for c in range(N_CLASSES):
|
| 352 |
+
mask = proj_labels[:5000] == c
|
| 353 |
+
if mask.sum() == 0: continue
|
| 354 |
+
lbl = CLASS_NAMES[c] if N_CLASSES <= 20 else None
|
| 355 |
+
ax.scatter(proj_2d[:5000][mask, 0], proj_2d[:5000][mask, 1],
|
| 356 |
+
c=CLASS_COLORS[c], s=4, alpha=0.3, label=lbl)
|
| 357 |
+
ax.scatter(anch_2d[:, 0], anch_2d[:, 1],
|
| 358 |
+
c='black', s=60, marker='*', zorder=5, label='anchors')
|
| 359 |
+
if N_CLASSES <= 20:
|
| 360 |
+
ax.legend(fontsize=7, markerscale=2, loc='upper right', ncol=2)
|
| 361 |
+
ax.set_title(f'GeoLIP Core β PCA Embedding Space ({ds_name})\n'
|
| 362 |
+
f'val={val_acc:.1f}% | {total_params:,} params | '
|
| 363 |
+
f'CV={v_cv:.4f} | {n_active}/{n_anchors} anchors', fontsize=11)
|
| 364 |
+
ax.set_xlabel('PC1'); ax.set_ylabel('PC2')
|
| 365 |
+
ax.grid(True, alpha=0.2)
|
| 366 |
+
plt.tight_layout()
|
| 367 |
+
plt.savefig(f'{OUT_DIR}/01_pca_embedding_space.png', dpi=200)
|
| 368 |
+
plt.close()
|
| 369 |
+
|
| 370 |
+
# ββ [2] Triangulation connections ββ
|
| 371 |
+
print(" [2/8] Triangulation connections...")
|
| 372 |
+
fig, ax = plt.subplots(1, 1, figsize=(12, 10))
|
| 373 |
+
subset = min(500, len(embs))
|
| 374 |
+
for i in range(subset):
|
| 375 |
+
a_idx = nearest[i].item()
|
| 376 |
+
ax.plot([proj_2d[i, 0], anch_2d[a_idx, 0]],
|
| 377 |
+
[proj_2d[i, 1], anch_2d[a_idx, 1]],
|
| 378 |
+
c=CLASS_COLORS[labels[i].item()], alpha=0.06, linewidth=0.4)
|
| 379 |
+
for c in range(N_CLASSES):
|
| 380 |
+
mask = proj_labels[:5000] == c
|
| 381 |
+
if mask.sum() == 0: continue
|
| 382 |
+
ax.scatter(proj_2d[:5000][mask, 0], proj_2d[:5000][mask, 1],
|
| 383 |
+
c=CLASS_COLORS[c], s=3, alpha=0.25)
|
| 384 |
+
ax.scatter(anch_2d[:, 0], anch_2d[:, 1],
|
| 385 |
+
c='black', s=80, marker='*', zorder=5)
|
| 386 |
+
if n_anchors <= 128:
|
| 387 |
+
for a in range(n_anchors):
|
| 388 |
+
a_mask = nearest == a
|
| 389 |
+
if a_mask.sum() > 0:
|
| 390 |
+
dom_class = labels[a_mask].mode().values.item()
|
| 391 |
+
ax.annotate(str(dom_class), (anch_2d[a, 0], anch_2d[a, 1]),
|
| 392 |
+
fontsize=4, ha='center', va='center',
|
| 393 |
+
color='white', fontweight='bold',
|
| 394 |
+
bbox=dict(boxstyle='round,pad=0.1',
|
| 395 |
+
fc=CLASS_COLORS[dom_class], alpha=0.7))
|
| 396 |
+
ax.set_title(f'Triangulation: Image β Nearest Anchor ({ds_name})', fontsize=11)
|
| 397 |
+
ax.grid(True, alpha=0.2)
|
| 398 |
+
plt.tight_layout()
|
| 399 |
+
plt.savefig(f'{OUT_DIR}/02_triangulation_connections.png', dpi=200)
|
| 400 |
+
plt.close()
|
| 401 |
+
|
| 402 |
+
# ββ [3] 3D sphere ββ
|
| 403 |
+
print(" [3/8] 3D sphere projection...")
|
| 404 |
+
fig = plt.figure(figsize=(12, 10))
|
| 405 |
+
ax = fig.add_subplot(111, projection='3d')
|
| 406 |
+
n_3d = min(3000, len(embs))
|
| 407 |
+
for c in range(min(N_CLASSES, 20)):
|
| 408 |
+
mask = proj_labels[:n_3d] == c
|
| 409 |
+
if mask.sum() == 0: continue
|
| 410 |
+
ax.scatter(proj_3d[:n_3d][mask, 0], proj_3d[:n_3d][mask, 1],
|
| 411 |
+
proj_3d[:n_3d][mask, 2],
|
| 412 |
+
c=CLASS_COLORS[c], s=3, alpha=0.25,
|
| 413 |
+
label=CLASS_NAMES[c] if N_CLASSES <= 20 else None)
|
| 414 |
+
ax.scatter(anch_3d[:, 0], anch_3d[:, 1], anch_3d[:, 2],
|
| 415 |
+
c='black', s=40, marker='*', zorder=5)
|
| 416 |
+
if N_CLASSES <= 20:
|
| 417 |
+
ax.legend(fontsize=6, markerscale=2, loc='upper left', ncol=2)
|
| 418 |
+
ax.set_title(f'3D PCA β Constellation on the Sphere\n'
|
| 419 |
+
f'{n_anchors} anchors, {N_CLASSES} classes', fontsize=11)
|
| 420 |
+
plt.tight_layout()
|
| 421 |
+
plt.savefig(f'{OUT_DIR}/03_3d_sphere.png', dpi=200)
|
| 422 |
+
plt.close()
|
| 423 |
+
|
| 424 |
+
# ββ [4] Anchor-Class heatmap ββ
|
| 425 |
+
print(" [4/8] Anchor-class assignment matrix...")
|
| 426 |
+
assign_mat = torch.zeros(N_CLASSES, n_anchors)
|
| 427 |
+
for c in range(N_CLASSES):
|
| 428 |
+
c_nearest = nearest[labels == c]
|
| 429 |
+
for a in range(n_anchors):
|
| 430 |
+
assign_mat[c, a] = (c_nearest == a).sum().float()
|
| 431 |
+
assign_norm = assign_mat / (assign_mat.sum(dim=1, keepdim=True) + 1e-8)
|
| 432 |
+
|
| 433 |
+
peak_class = assign_norm.argmax(dim=0)
|
| 434 |
+
sort_order = peak_class.argsort()
|
| 435 |
+
assign_sorted = assign_norm[:, sort_order]
|
| 436 |
+
|
| 437 |
+
h = max(6, N_CLASSES * 0.12)
|
| 438 |
+
fig, ax = plt.subplots(1, 1, figsize=(16, h))
|
| 439 |
+
im = ax.imshow(assign_sorted.numpy(), aspect='auto', cmap='YlOrRd')
|
| 440 |
+
if N_CLASSES <= 30:
|
| 441 |
+
ax.set_yticks(range(N_CLASSES))
|
| 442 |
+
ax.set_yticklabels(CLASS_NAMES, fontsize=max(4, 9 - N_CLASSES // 15))
|
| 443 |
+
ax.set_xlabel('Anchor index (sorted by peak class)')
|
| 444 |
+
ax.set_title(f'Class β Anchor Assignment ({ds_name})', fontsize=11)
|
| 445 |
+
plt.colorbar(im, ax=ax, shrink=0.8)
|
| 446 |
+
plt.tight_layout()
|
| 447 |
+
plt.savefig(f'{OUT_DIR}/04_anchor_class_heatmap.png', dpi=200)
|
| 448 |
+
plt.close()
|
| 449 |
+
|
| 450 |
+
# ββ [5] Triangulation profiles ββ
|
| 451 |
+
print(" [5/8] Class triangulation profiles...")
|
| 452 |
+
if N_CLASSES <= 10:
|
| 453 |
+
show_classes = list(range(N_CLASSES))
|
| 454 |
+
else:
|
| 455 |
+
sorted_by_acc = sorted(range(N_CLASSES), key=lambda c: class_accs[c])
|
| 456 |
+
show_classes = sorted_by_acc[:5] + sorted_by_acc[-5:]
|
| 457 |
+
|
| 458 |
+
nrows, ncols = 2, 5
|
| 459 |
+
fig, axes = plt.subplots(nrows, ncols, figsize=(20, 8))
|
| 460 |
+
for idx, c in enumerate(show_classes):
|
| 461 |
+
ax = axes[idx // ncols][idx % ncols]
|
| 462 |
+
c_tris = tris[labels == c]
|
| 463 |
+
if len(c_tris) == 0: continue
|
| 464 |
+
mean_tri = c_tris.mean(0).numpy()
|
| 465 |
+
std_tri = c_tris.std(0).numpy()
|
| 466 |
+
x = np.arange(n_anchors)
|
| 467 |
+
color = CLASS_COLORS[c]
|
| 468 |
+
ax.fill_between(x, mean_tri - std_tri, mean_tri + std_tri,
|
| 469 |
+
alpha=0.3, color=color)
|
| 470 |
+
ax.plot(x, mean_tri, color=color, linewidth=1.5)
|
| 471 |
+
ax.set_title(f'{CLASS_NAMES[c]} ({class_accs[c]:.0f}%)',
|
| 472 |
+
fontsize=9, fontweight='bold', color=color)
|
| 473 |
+
ax.set_ylim(0, max(1.6, mean_tri.max() * 1.2))
|
| 474 |
+
ax.tick_params(labelsize=5)
|
| 475 |
+
tag = "all classes" if N_CLASSES <= 10 else "5 worst + 5 best"
|
| 476 |
+
plt.suptitle(f'Triangulation Fingerprints ({tag})', fontsize=12)
|
| 477 |
+
plt.tight_layout()
|
| 478 |
+
plt.savefig(f'{OUT_DIR}/05_triangulation_profiles.png', dpi=200)
|
| 479 |
+
plt.close()
|
| 480 |
+
|
| 481 |
+
# ββ [6] Anchor utilization ββ
|
| 482 |
+
print(" [6/8] Anchor utilization...")
|
| 483 |
+
fig, (ax1, ax2) = plt.subplots(1, 2, figsize=(14, 5))
|
| 484 |
+
|
| 485 |
+
sorted_counts, _ = counts.sort(descending=True)
|
| 486 |
+
ax1.bar(range(n_anchors), sorted_counts.numpy(),
|
| 487 |
+
color=['#2196F3' if c > 0 else '#F44336' for c in sorted_counts], width=1.0)
|
| 488 |
+
ax1.set_xlabel('Anchor (sorted)')
|
| 489 |
+
ax1.set_ylabel('Assigned samples')
|
| 490 |
+
ax1.set_title(f'Anchor Utilization ({n_active}/{n_anchors} active)')
|
| 491 |
+
ax1.axhline(y=len(labels) / n_anchors, color='gray', linestyle='--', alpha=0.5)
|
| 492 |
+
|
| 493 |
+
# Per-class anchor entropy
|
| 494 |
+
entropies = []
|
| 495 |
+
for c in range(N_CLASSES):
|
| 496 |
+
c_nearest = nearest[labels == c]
|
| 497 |
+
dist = torch.zeros(n_anchors)
|
| 498 |
+
for a in range(n_anchors):
|
| 499 |
+
dist[a] = (c_nearest == a).sum().float()
|
| 500 |
+
dist = dist / (dist.sum() + 1e-8)
|
| 501 |
+
ent = -(dist * (dist + 1e-10).log()).sum().item()
|
| 502 |
+
entropies.append(ent)
|
| 503 |
+
|
| 504 |
+
if N_CLASSES <= 20:
|
| 505 |
+
ax2.barh(range(N_CLASSES), entropies,
|
| 506 |
+
color=[CLASS_COLORS[c] for c in range(N_CLASSES)])
|
| 507 |
+
ax2.set_yticks(range(N_CLASSES))
|
| 508 |
+
ax2.set_yticklabels(CLASS_NAMES, fontsize=8)
|
| 509 |
+
ax2.set_xlabel('Anchor assignment entropy')
|
| 510 |
+
else:
|
| 511 |
+
ax2.hist(entropies, bins=30, color='steelblue', edgecolor='white')
|
| 512 |
+
ax2.set_xlabel('Anchor assignment entropy')
|
| 513 |
+
ax2.set_ylabel('Number of classes')
|
| 514 |
+
|
| 515 |
+
# Gini
|
| 516 |
+
c_sorted = counts.float().sort().values
|
| 517 |
+
cum = c_sorted.cumsum(0)
|
| 518 |
+
gini = (1 - 2 * cum.sum() / (len(c_sorted) * c_sorted.sum() + 1e-8)).item()
|
| 519 |
+
ax2.set_title(f'Anchor Spread (Gini={gini:.3f})')
|
| 520 |
+
plt.tight_layout()
|
| 521 |
+
plt.savefig(f'{OUT_DIR}/06_anchor_utilization.png', dpi=200)
|
| 522 |
+
plt.close()
|
| 523 |
+
|
| 524 |
+
# ββ [7] Patchwork compartment responses ββ
|
| 525 |
+
print(" [7/8] Patchwork compartment responses...")
|
| 526 |
+
n_comp = cfg.get('n_comp', 8)
|
| 527 |
+
asgn = model.patchwork.asgn.cpu()
|
| 528 |
+
|
| 529 |
+
if N_CLASSES <= 10:
|
| 530 |
+
show_c = list(range(N_CLASSES))
|
| 531 |
+
else:
|
| 532 |
+
show_c = show_classes
|
| 533 |
+
|
| 534 |
+
ncols_pw = min(4, n_comp)
|
| 535 |
+
nrows_pw = math.ceil(n_comp / ncols_pw)
|
| 536 |
+
fig, axes = plt.subplots(nrows_pw, ncols_pw, figsize=(4 * ncols_pw, 3 * nrows_pw))
|
| 537 |
+
if n_comp == 1: axes = [[axes]]
|
| 538 |
+
elif nrows_pw == 1: axes = [axes if isinstance(axes, list) else list(axes)]
|
| 539 |
+
elif ncols_pw == 1: axes = [[a] for a in axes]
|
| 540 |
+
axes_flat = [axes[r][c] for r in range(nrows_pw) for c in range(ncols_pw)]
|
| 541 |
+
|
| 542 |
+
for k in range(min(n_comp, len(axes_flat))):
|
| 543 |
+
ax = axes_flat[k]
|
| 544 |
+
comp_tris = tris[:, asgn == k]
|
| 545 |
+
class_means = []
|
| 546 |
+
class_labels_show = []
|
| 547 |
+
for c in show_c:
|
| 548 |
+
cm = comp_tris[labels == c]
|
| 549 |
+
if len(cm) > 0:
|
| 550 |
+
class_means.append(cm.mean(0).numpy())
|
| 551 |
+
class_labels_show.append(CLASS_NAMES[c])
|
| 552 |
+
if not class_means: continue
|
| 553 |
+
class_means = np.stack(class_means)
|
| 554 |
+
ax.imshow(class_means, aspect='auto', cmap='viridis')
|
| 555 |
+
ax.set_yticks(range(len(class_labels_show)))
|
| 556 |
+
ax.set_yticklabels(class_labels_show, fontsize=6)
|
| 557 |
+
ax.set_title(f'Comp {k}', fontsize=9)
|
| 558 |
+
for k in range(n_comp, len(axes_flat)):
|
| 559 |
+
axes_flat[k].set_visible(False)
|
| 560 |
+
plt.suptitle('Patchwork Compartment Responses by Class', fontsize=12)
|
| 561 |
+
plt.tight_layout()
|
| 562 |
+
plt.savefig(f'{OUT_DIR}/07_patchwork_compartments.png', dpi=200)
|
| 563 |
+
plt.close()
|
| 564 |
+
|
| 565 |
+
# ββ [8] Confusion matrix ββ
|
| 566 |
+
print(" [8/8] Confusion matrix...")
|
| 567 |
+
conf_mat = torch.zeros(N_CLASSES, N_CLASSES, dtype=torch.long)
|
| 568 |
+
for i in range(len(labels)):
|
| 569 |
+
conf_mat[labels[i], preds[i]] += 1
|
| 570 |
+
conf_pct = conf_mat.float() / (conf_mat.sum(dim=1, keepdim=True) + 1e-8) * 100
|
| 571 |
+
|
| 572 |
+
if N_CLASSES <= 20:
|
| 573 |
+
fig, ax = plt.subplots(1, 1, figsize=(8, 7))
|
| 574 |
+
im = ax.imshow(conf_pct.numpy(), cmap='Blues', vmin=0, vmax=100)
|
| 575 |
+
for i in range(N_CLASSES):
|
| 576 |
+
for j in range(N_CLASSES):
|
| 577 |
+
v = conf_pct[i, j].item()
|
| 578 |
+
ax.text(j, i, f'{v:.0f}', ha='center', va='center',
|
| 579 |
+
fontsize=max(4, 8 - N_CLASSES // 5),
|
| 580 |
+
color='white' if v > 50 else 'black')
|
| 581 |
+
ax.set_xticks(range(N_CLASSES))
|
| 582 |
+
ax.set_yticks(range(N_CLASSES))
|
| 583 |
+
ax.set_xticklabels(CLASS_NAMES, rotation=45, ha='right', fontsize=7)
|
| 584 |
+
ax.set_yticklabels(CLASS_NAMES, fontsize=7)
|
| 585 |
+
else:
|
| 586 |
+
fig, ax = plt.subplots(1, 1, figsize=(14, 12))
|
| 587 |
+
im = ax.imshow(conf_pct.numpy(), cmap='Blues', vmin=0, vmax=100)
|
| 588 |
+
ax.set_xlabel('Predicted class')
|
| 589 |
+
ax.set_ylabel('True class')
|
| 590 |
+
ax.set_title(f'Confusion Matrix β {val_acc:.1f}% ({ds_name})', fontsize=11)
|
| 591 |
+
plt.colorbar(im, ax=ax, shrink=0.8)
|
| 592 |
+
plt.tight_layout()
|
| 593 |
+
plt.savefig(f'{OUT_DIR}/08_confusion_matrix.png', dpi=200)
|
| 594 |
+
plt.close()
|
| 595 |
+
|
| 596 |
+
print(f"\n β All 8 visualizations saved to {OUT_DIR}/")
|
| 597 |
+
|
| 598 |
+
|
| 599 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 600 |
+
# SUMMARY
|
| 601 |
+
# ββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
|
| 602 |
+
|
| 603 |
+
print(f"\n{'='*70}")
|
| 604 |
+
print("SUMMARY")
|
| 605 |
+
print(f"{'='*70}")
|
| 606 |
+
print(f" Dataset: {ds_name} ({N_CLASSES} classes)")
|
| 607 |
+
print(f" Params: {total_params:,}")
|
| 608 |
+
print(f" Val accuracy: {val_acc:.1f}%")
|
| 609 |
+
print(f" Eff dim: {eff_dim:.1f}/{embs.shape[1]}")
|
| 610 |
+
print(f" Same-class cos: {same_cos:.4f}")
|
| 611 |
+
print(f" Diff-class cos: {diff_cos:.4f}")
|
| 612 |
+
print(f" Gap: {gap:.4f}")
|
| 613 |
+
print(f" CV: {v_cv:.4f}")
|
| 614 |
+
print(f" Anchors active: {n_active}/{n_anchors}")
|
| 615 |
+
|
| 616 |
+
worst_i = min(range(N_CLASSES), key=lambda c: class_accs[c])
|
| 617 |
+
best_i = max(range(N_CLASSES), key=lambda c: class_accs[c])
|
| 618 |
+
print(f" Worst class: {CLASS_NAMES[worst_i]} ({class_accs[worst_i]:.1f}%)")
|
| 619 |
+
print(f" Best class: {CLASS_NAMES[best_i]} ({class_accs[best_i]:.1f}%)")
|
| 620 |
+
|
| 621 |
+
warnings = []
|
| 622 |
+
if n_active < n_anchors * 0.5:
|
| 623 |
+
warnings.append(f"Anchor collapse: {n_active}/{n_anchors}")
|
| 624 |
+
if eff_dim < 5:
|
| 625 |
+
warnings.append(f"Embedding collapse: eff_dim={eff_dim:.1f}")
|
| 626 |
+
if gap < 0.02:
|
| 627 |
+
warnings.append(f"Low class separation: gap={gap:.4f}")
|
| 628 |
+
|
| 629 |
+
if warnings:
|
| 630 |
+
print(f"\n β WARNINGS: {', '.join(warnings)}")
|
| 631 |
+
else:
|
| 632 |
+
print(f"\n β All diagnostics healthy")
|
| 633 |
+
|
| 634 |
+
print(f"\n{'='*70}")
|
| 635 |
+
print("ANALYSIS COMPLETE")
|
| 636 |
+
print(f"{'='*70}")
|