diff --git a/.gitattributes b/.gitattributes
index aa41ffdae8da41fe725fcb3caf1821221d9c3b18..f1b5bef09fb0730a805bfef495b9c3c268dd70da 100644
--- a/.gitattributes
+++ b/.gitattributes
@@ -38,3 +38,4 @@ data/v1_graphs_upstream/tcga_brca/preprocessing.png filter=lfs diff=lfs merge=lf
 data/v2_graphs/tcga_brca/sample_labels_rich.csv filter=lfs diff=lfs merge=lfs -text
 upstream_v1/tcga_brca/metadata.csv filter=lfs diff=lfs merge=lfs -text
 upstream_v1/tcga_brca/preprocessing.png filter=lfs diff=lfs merge=lfs -text
+graphs/tcga_brca/sample_labels_rich.csv filter=lfs diff=lfs merge=lfs -text
diff --git a/graphist_V2.pt b/graphist_v2.pt
similarity index 100%
rename from graphist_V2.pt
rename to graphist_v2.pt
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000206.tar b/graphs/tcga_brca/data/tcga-brca-000206.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000206.tar
rename to graphs/tcga_brca/data/tcga-brca-000206.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000207.tar b/graphs/tcga_brca/data/tcga-brca-000207.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000207.tar
rename to graphs/tcga_brca/data/tcga-brca-000207.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000208.tar b/graphs/tcga_brca/data/tcga-brca-000208.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000208.tar
rename to graphs/tcga_brca/data/tcga-brca-000208.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000209.tar b/graphs/tcga_brca/data/tcga-brca-000209.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000209.tar
rename to graphs/tcga_brca/data/tcga-brca-000209.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000210.tar b/graphs/tcga_brca/data/tcga-brca-000210.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000210.tar
rename to graphs/tcga_brca/data/tcga-brca-000210.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000211.tar b/graphs/tcga_brca/data/tcga-brca-000211.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000211.tar
rename to graphs/tcga_brca/data/tcga-brca-000211.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000212.tar b/graphs/tcga_brca/data/tcga-brca-000212.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000212.tar
rename to graphs/tcga_brca/data/tcga-brca-000212.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000213.tar b/graphs/tcga_brca/data/tcga-brca-000213.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000213.tar
rename to graphs/tcga_brca/data/tcga-brca-000213.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000214.tar b/graphs/tcga_brca/data/tcga-brca-000214.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000214.tar
rename to graphs/tcga_brca/data/tcga-brca-000214.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000215.tar b/graphs/tcga_brca/data/tcga-brca-000215.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000215.tar
rename to graphs/tcga_brca/data/tcga-brca-000215.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000216.tar b/graphs/tcga_brca/data/tcga-brca-000216.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000216.tar
rename to graphs/tcga_brca/data/tcga-brca-000216.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000217.tar b/graphs/tcga_brca/data/tcga-brca-000217.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000217.tar
rename to graphs/tcga_brca/data/tcga-brca-000217.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000218.tar b/graphs/tcga_brca/data/tcga-brca-000218.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000218.tar
rename to graphs/tcga_brca/data/tcga-brca-000218.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000219.tar b/graphs/tcga_brca/data/tcga-brca-000219.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000219.tar
rename to graphs/tcga_brca/data/tcga-brca-000219.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000220.tar b/graphs/tcga_brca/data/tcga-brca-000220.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000220.tar
rename to graphs/tcga_brca/data/tcga-brca-000220.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000221.tar b/graphs/tcga_brca/data/tcga-brca-000221.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000221.tar
rename to graphs/tcga_brca/data/tcga-brca-000221.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000222.tar b/graphs/tcga_brca/data/tcga-brca-000222.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000222.tar
rename to graphs/tcga_brca/data/tcga-brca-000222.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000223.tar b/graphs/tcga_brca/data/tcga-brca-000223.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000223.tar
rename to graphs/tcga_brca/data/tcga-brca-000223.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000224.tar b/graphs/tcga_brca/data/tcga-brca-000224.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000224.tar
rename to graphs/tcga_brca/data/tcga-brca-000224.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000225.tar b/graphs/tcga_brca/data/tcga-brca-000225.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000225.tar
rename to graphs/tcga_brca/data/tcga-brca-000225.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000226.tar b/graphs/tcga_brca/data/tcga-brca-000226.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000226.tar
rename to graphs/tcga_brca/data/tcga-brca-000226.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000227.tar b/graphs/tcga_brca/data/tcga-brca-000227.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000227.tar
rename to graphs/tcga_brca/data/tcga-brca-000227.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000228.tar b/graphs/tcga_brca/data/tcga-brca-000228.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000228.tar
rename to graphs/tcga_brca/data/tcga-brca-000228.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000229.tar b/graphs/tcga_brca/data/tcga-brca-000229.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000229.tar
rename to graphs/tcga_brca/data/tcga-brca-000229.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000230.tar b/graphs/tcga_brca/data/tcga-brca-000230.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000230.tar
rename to graphs/tcga_brca/data/tcga-brca-000230.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000231.tar b/graphs/tcga_brca/data/tcga-brca-000231.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000231.tar
rename to graphs/tcga_brca/data/tcga-brca-000231.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000232.tar b/graphs/tcga_brca/data/tcga-brca-000232.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000232.tar
rename to graphs/tcga_brca/data/tcga-brca-000232.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000233.tar b/graphs/tcga_brca/data/tcga-brca-000233.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000233.tar
rename to graphs/tcga_brca/data/tcga-brca-000233.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000234.tar b/graphs/tcga_brca/data/tcga-brca-000234.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000234.tar
rename to graphs/tcga_brca/data/tcga-brca-000234.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000235.tar b/graphs/tcga_brca/data/tcga-brca-000235.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000235.tar
rename to graphs/tcga_brca/data/tcga-brca-000235.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000236.tar b/graphs/tcga_brca/data/tcga-brca-000236.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000236.tar
rename to graphs/tcga_brca/data/tcga-brca-000236.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000237.tar b/graphs/tcga_brca/data/tcga-brca-000237.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000237.tar
rename to graphs/tcga_brca/data/tcga-brca-000237.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000238.tar b/graphs/tcga_brca/data/tcga-brca-000238.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000238.tar
rename to graphs/tcga_brca/data/tcga-brca-000238.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000239.tar b/graphs/tcga_brca/data/tcga-brca-000239.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000239.tar
rename to graphs/tcga_brca/data/tcga-brca-000239.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000240.tar b/graphs/tcga_brca/data/tcga-brca-000240.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000240.tar
rename to graphs/tcga_brca/data/tcga-brca-000240.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000241.tar b/graphs/tcga_brca/data/tcga-brca-000241.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000241.tar
rename to graphs/tcga_brca/data/tcga-brca-000241.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000242.tar b/graphs/tcga_brca/data/tcga-brca-000242.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000242.tar
rename to graphs/tcga_brca/data/tcga-brca-000242.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000243.tar b/graphs/tcga_brca/data/tcga-brca-000243.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000243.tar
rename to graphs/tcga_brca/data/tcga-brca-000243.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000244.tar b/graphs/tcga_brca/data/tcga-brca-000244.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000244.tar
rename to graphs/tcga_brca/data/tcga-brca-000244.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000245.tar b/graphs/tcga_brca/data/tcga-brca-000245.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000245.tar
rename to graphs/tcga_brca/data/tcga-brca-000245.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000246.tar b/graphs/tcga_brca/data/tcga-brca-000246.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000246.tar
rename to graphs/tcga_brca/data/tcga-brca-000246.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000247.tar b/graphs/tcga_brca/data/tcga-brca-000247.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000247.tar
rename to graphs/tcga_brca/data/tcga-brca-000247.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000248.tar b/graphs/tcga_brca/data/tcga-brca-000248.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000248.tar
rename to graphs/tcga_brca/data/tcga-brca-000248.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000249.tar b/graphs/tcga_brca/data/tcga-brca-000249.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000249.tar
rename to graphs/tcga_brca/data/tcga-brca-000249.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000250.tar b/graphs/tcga_brca/data/tcga-brca-000250.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000250.tar
rename to graphs/tcga_brca/data/tcga-brca-000250.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000251.tar b/graphs/tcga_brca/data/tcga-brca-000251.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000251.tar
rename to graphs/tcga_brca/data/tcga-brca-000251.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000252.tar b/graphs/tcga_brca/data/tcga-brca-000252.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000252.tar
rename to graphs/tcga_brca/data/tcga-brca-000252.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000253.tar b/graphs/tcga_brca/data/tcga-brca-000253.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000253.tar
rename to graphs/tcga_brca/data/tcga-brca-000253.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000254.tar b/graphs/tcga_brca/data/tcga-brca-000254.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000254.tar
rename to graphs/tcga_brca/data/tcga-brca-000254.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000255.tar b/graphs/tcga_brca/data/tcga-brca-000255.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000255.tar
rename to graphs/tcga_brca/data/tcga-brca-000255.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000256.tar b/graphs/tcga_brca/data/tcga-brca-000256.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000256.tar
rename to graphs/tcga_brca/data/tcga-brca-000256.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000257.tar b/graphs/tcga_brca/data/tcga-brca-000257.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000257.tar
rename to graphs/tcga_brca/data/tcga-brca-000257.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000258.tar b/graphs/tcga_brca/data/tcga-brca-000258.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000258.tar
rename to graphs/tcga_brca/data/tcga-brca-000258.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000259.tar b/graphs/tcga_brca/data/tcga-brca-000259.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000259.tar
rename to graphs/tcga_brca/data/tcga-brca-000259.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000260.tar b/graphs/tcga_brca/data/tcga-brca-000260.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000260.tar
rename to graphs/tcga_brca/data/tcga-brca-000260.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000261.tar b/graphs/tcga_brca/data/tcga-brca-000261.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000261.tar
rename to graphs/tcga_brca/data/tcga-brca-000261.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000262.tar b/graphs/tcga_brca/data/tcga-brca-000262.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000262.tar
rename to graphs/tcga_brca/data/tcga-brca-000262.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000263.tar b/graphs/tcga_brca/data/tcga-brca-000263.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000263.tar
rename to graphs/tcga_brca/data/tcga-brca-000263.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000264.tar b/graphs/tcga_brca/data/tcga-brca-000264.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000264.tar
rename to graphs/tcga_brca/data/tcga-brca-000264.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000265.tar b/graphs/tcga_brca/data/tcga-brca-000265.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000265.tar
rename to graphs/tcga_brca/data/tcga-brca-000265.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000266.tar b/graphs/tcga_brca/data/tcga-brca-000266.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000266.tar
rename to graphs/tcga_brca/data/tcga-brca-000266.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000267.tar b/graphs/tcga_brca/data/tcga-brca-000267.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000267.tar
rename to graphs/tcga_brca/data/tcga-brca-000267.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000268.tar b/graphs/tcga_brca/data/tcga-brca-000268.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000268.tar
rename to graphs/tcga_brca/data/tcga-brca-000268.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000269.tar b/graphs/tcga_brca/data/tcga-brca-000269.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000269.tar
rename to graphs/tcga_brca/data/tcga-brca-000269.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000270.tar b/graphs/tcga_brca/data/tcga-brca-000270.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000270.tar
rename to graphs/tcga_brca/data/tcga-brca-000270.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000271.tar b/graphs/tcga_brca/data/tcga-brca-000271.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000271.tar
rename to graphs/tcga_brca/data/tcga-brca-000271.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000272.tar b/graphs/tcga_brca/data/tcga-brca-000272.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000272.tar
rename to graphs/tcga_brca/data/tcga-brca-000272.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000273.tar b/graphs/tcga_brca/data/tcga-brca-000273.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000273.tar
rename to graphs/tcga_brca/data/tcga-brca-000273.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000274.tar b/graphs/tcga_brca/data/tcga-brca-000274.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000274.tar
rename to graphs/tcga_brca/data/tcga-brca-000274.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000275.tar b/graphs/tcga_brca/data/tcga-brca-000275.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000275.tar
rename to graphs/tcga_brca/data/tcga-brca-000275.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000276.tar b/graphs/tcga_brca/data/tcga-brca-000276.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000276.tar
rename to graphs/tcga_brca/data/tcga-brca-000276.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000277.tar b/graphs/tcga_brca/data/tcga-brca-000277.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000277.tar
rename to graphs/tcga_brca/data/tcga-brca-000277.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000278.tar b/graphs/tcga_brca/data/tcga-brca-000278.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000278.tar
rename to graphs/tcga_brca/data/tcga-brca-000278.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000279.tar b/graphs/tcga_brca/data/tcga-brca-000279.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000279.tar
rename to graphs/tcga_brca/data/tcga-brca-000279.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000280.tar b/graphs/tcga_brca/data/tcga-brca-000280.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000280.tar
rename to graphs/tcga_brca/data/tcga-brca-000280.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000281.tar b/graphs/tcga_brca/data/tcga-brca-000281.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000281.tar
rename to graphs/tcga_brca/data/tcga-brca-000281.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000282.tar b/graphs/tcga_brca/data/tcga-brca-000282.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000282.tar
rename to graphs/tcga_brca/data/tcga-brca-000282.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000283.tar b/graphs/tcga_brca/data/tcga-brca-000283.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000283.tar
rename to graphs/tcga_brca/data/tcga-brca-000283.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000284.tar b/graphs/tcga_brca/data/tcga-brca-000284.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000284.tar
rename to graphs/tcga_brca/data/tcga-brca-000284.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000285.tar b/graphs/tcga_brca/data/tcga-brca-000285.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000285.tar
rename to graphs/tcga_brca/data/tcga-brca-000285.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000286.tar b/graphs/tcga_brca/data/tcga-brca-000286.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000286.tar
rename to graphs/tcga_brca/data/tcga-brca-000286.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000287.tar b/graphs/tcga_brca/data/tcga-brca-000287.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000287.tar
rename to graphs/tcga_brca/data/tcga-brca-000287.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000288.tar b/graphs/tcga_brca/data/tcga-brca-000288.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000288.tar
rename to graphs/tcga_brca/data/tcga-brca-000288.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000289.tar b/graphs/tcga_brca/data/tcga-brca-000289.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000289.tar
rename to graphs/tcga_brca/data/tcga-brca-000289.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000290.tar b/graphs/tcga_brca/data/tcga-brca-000290.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000290.tar
rename to graphs/tcga_brca/data/tcga-brca-000290.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000291.tar b/graphs/tcga_brca/data/tcga-brca-000291.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000291.tar
rename to graphs/tcga_brca/data/tcga-brca-000291.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000292.tar b/graphs/tcga_brca/data/tcga-brca-000292.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000292.tar
rename to graphs/tcga_brca/data/tcga-brca-000292.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000293.tar b/graphs/tcga_brca/data/tcga-brca-000293.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000293.tar
rename to graphs/tcga_brca/data/tcga-brca-000293.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000294.tar b/graphs/tcga_brca/data/tcga-brca-000294.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000294.tar
rename to graphs/tcga_brca/data/tcga-brca-000294.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000295.tar b/graphs/tcga_brca/data/tcga-brca-000295.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000295.tar
rename to graphs/tcga_brca/data/tcga-brca-000295.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000296.tar b/graphs/tcga_brca/data/tcga-brca-000296.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000296.tar
rename to graphs/tcga_brca/data/tcga-brca-000296.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000297.tar b/graphs/tcga_brca/data/tcga-brca-000297.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000297.tar
rename to graphs/tcga_brca/data/tcga-brca-000297.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000298.tar b/graphs/tcga_brca/data/tcga-brca-000298.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000298.tar
rename to graphs/tcga_brca/data/tcga-brca-000298.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000299.tar b/graphs/tcga_brca/data/tcga-brca-000299.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000299.tar
rename to graphs/tcga_brca/data/tcga-brca-000299.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000300.tar b/graphs/tcga_brca/data/tcga-brca-000300.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000300.tar
rename to graphs/tcga_brca/data/tcga-brca-000300.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000301.tar b/graphs/tcga_brca/data/tcga-brca-000301.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000301.tar
rename to graphs/tcga_brca/data/tcga-brca-000301.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000302.tar b/graphs/tcga_brca/data/tcga-brca-000302.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000302.tar
rename to graphs/tcga_brca/data/tcga-brca-000302.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000303.tar b/graphs/tcga_brca/data/tcga-brca-000303.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000303.tar
rename to graphs/tcga_brca/data/tcga-brca-000303.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000304.tar b/graphs/tcga_brca/data/tcga-brca-000304.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000304.tar
rename to graphs/tcga_brca/data/tcga-brca-000304.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000305.tar b/graphs/tcga_brca/data/tcga-brca-000305.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000305.tar
rename to graphs/tcga_brca/data/tcga-brca-000305.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000306.tar b/graphs/tcga_brca/data/tcga-brca-000306.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000306.tar
rename to graphs/tcga_brca/data/tcga-brca-000306.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000307.tar b/graphs/tcga_brca/data/tcga-brca-000307.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000307.tar
rename to graphs/tcga_brca/data/tcga-brca-000307.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000308.tar b/graphs/tcga_brca/data/tcga-brca-000308.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000308.tar
rename to graphs/tcga_brca/data/tcga-brca-000308.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000309.tar b/graphs/tcga_brca/data/tcga-brca-000309.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000309.tar
rename to graphs/tcga_brca/data/tcga-brca-000309.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000310.tar b/graphs/tcga_brca/data/tcga-brca-000310.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000310.tar
rename to graphs/tcga_brca/data/tcga-brca-000310.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000311.tar b/graphs/tcga_brca/data/tcga-brca-000311.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000311.tar
rename to graphs/tcga_brca/data/tcga-brca-000311.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000312.tar b/graphs/tcga_brca/data/tcga-brca-000312.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000312.tar
rename to graphs/tcga_brca/data/tcga-brca-000312.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000313.tar b/graphs/tcga_brca/data/tcga-brca-000313.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000313.tar
rename to graphs/tcga_brca/data/tcga-brca-000313.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000314.tar b/graphs/tcga_brca/data/tcga-brca-000314.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000314.tar
rename to graphs/tcga_brca/data/tcga-brca-000314.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000315.tar b/graphs/tcga_brca/data/tcga-brca-000315.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000315.tar
rename to graphs/tcga_brca/data/tcga-brca-000315.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000316.tar b/graphs/tcga_brca/data/tcga-brca-000316.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000316.tar
rename to graphs/tcga_brca/data/tcga-brca-000316.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000317.tar b/graphs/tcga_brca/data/tcga-brca-000317.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000317.tar
rename to graphs/tcga_brca/data/tcga-brca-000317.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000318.tar b/graphs/tcga_brca/data/tcga-brca-000318.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000318.tar
rename to graphs/tcga_brca/data/tcga-brca-000318.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000319.tar b/graphs/tcga_brca/data/tcga-brca-000319.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000319.tar
rename to graphs/tcga_brca/data/tcga-brca-000319.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000320.tar b/graphs/tcga_brca/data/tcga-brca-000320.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000320.tar
rename to graphs/tcga_brca/data/tcga-brca-000320.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000321.tar b/graphs/tcga_brca/data/tcga-brca-000321.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000321.tar
rename to graphs/tcga_brca/data/tcga-brca-000321.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000322.tar b/graphs/tcga_brca/data/tcga-brca-000322.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000322.tar
rename to graphs/tcga_brca/data/tcga-brca-000322.tar
diff --git a/data/v2_graphs/tcga_brca/data/tcga-brca-000323.tar b/graphs/tcga_brca/data/tcga-brca-000323.tar
similarity index 100%
rename from data/v2_graphs/tcga_brca/data/tcga-brca-000323.tar
rename to graphs/tcga_brca/data/tcga-brca-000323.tar
diff --git a/data/v2_graphs/tcga_brca/normalization.json b/graphs/tcga_brca/normalization.json
similarity index 100%
rename from data/v2_graphs/tcga_brca/normalization.json
rename to graphs/tcga_brca/normalization.json
diff --git a/data/v2_graphs/tcga_brca/sample_labels.csv b/graphs/tcga_brca/sample_labels.csv
similarity index 100%
rename from data/v2_graphs/tcga_brca/sample_labels.csv
rename to graphs/tcga_brca/sample_labels.csv
diff --git a/data/v2_graphs/tcga_brca/sample_labels_rich.csv b/graphs/tcga_brca/sample_labels_rich.csv
similarity index 100%
rename from data/v2_graphs/tcga_brca/sample_labels_rich.csv
rename to graphs/tcga_brca/sample_labels_rich.csv
diff --git a/data/v2_graphs/tcga_brca/sample_split.csv b/graphs/tcga_brca/sample_split.csv
similarity index 100%
rename from data/v2_graphs/tcga_brca/sample_split.csv
rename to graphs/tcga_brca/sample_split.csv
diff --git a/rebase_graph_paths.py b/modeling/rebase_graph_paths.py
similarity index 100%
rename from rebase_graph_paths.py
rename to modeling/rebase_graph_paths.py