Create README.md
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README.md
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| 1 |
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Fine-tuned [Bert-Base-Chinese](https://huggingface.co/bert-base-chinese) for NER task on [Adapting/chinese_biomedical_NER_dataset](https://huggingface.co/datasets/Adapting/chinese_biomedical_NER_dataset)
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# Usage
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```python
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from transformers import AutoTokenizer, AutoModelForTokenClassification
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tokenizer = AutoTokenizer.from_pretrained("Adapting/bert-base-chinese-finetuned-NER-biomedical")
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model = AutoModelForTokenClassification.from_pretrained("Adapting/bert-base-chinese-finetuned-NER-biomedical",revision='7f63e3d18b1dc3cc23041a89e77be21860704d2e')
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from transformers import pipeline
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nlp = pipeline('ner',model=model,tokenizer = tokenizer)
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tag_set = [
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'B_手术',
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'I_疾病和诊断',
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'B_症状',
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'I_解剖部位',
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'I_药物',
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'B_影像检查',
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'B_药物',
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'B_疾病和诊断',
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'I_影像检查',
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'I_手术',
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'B_解剖部位',
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'O',
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'B_实验室检验',
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'I_症状',
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'I_实验室检验'
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]
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tag2id = lambda tag: tag_set.index(tag)
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id2tag = lambda id: tag_set[id]
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def readable_result(result):
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results_in_word = []
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j = 0
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while j < len(result):
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i = result[j]
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entity = id2tag(int(i['entity'][i['entity'].index('_')+1:]))
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token = i['word']
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if entity.startswith('B'):
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entity_name = entity[entity.index('_')+1:]
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word = token
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j = j+1
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while j<len(result):
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next = result[j]
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next_ent = id2tag(int(next['entity'][next['entity'].index('_')+1:]))
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next_token = next['word']
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if next_ent.startswith('I') and next_ent[next_ent.index('_')+1:] == entity_name:
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word += next_token
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j += 1
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if j >= len(result):
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results_in_word.append((entity_name,word))
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else:
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results_in_word.append((entity_name,word))
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break
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else:
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j += 1
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return results_in_word
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print(readable_result(nlp('淋球菌性尿道炎会引起头痛')))
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'''
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[('疾病和诊断', '淋球菌性尿道炎'), ('症状', '头痛')]
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'''
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```
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