Upload __init__.py

__init__.py

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+"""
+Bio-ACDC: Biological Sequence Model Coevolution Framework
+
+An adaptation of AC/DC (Assessment Coevolving with Diverse Capabilities)
+for biological language models (DNA, RNA, Protein).
+
+Core idea: Coevolve populations of biological LMs and synthetic sequence tasks
+to discover novel model experts specialized for different biological functions.
+"""
+
+from .core import BioACDC, BioACDCConfig
+from .tasks import BioTaskPool, ProteinTask, DNATask
+from .mergers import BioModelMerger, LinearMerge, SlerpMerge, TaskVectorMerge
+from .mutators import GaussianNoiseMutator, LayerScaleMutator, DropoutMutator, BioMutator
+from .archive import BioArchive, DominatedNoveltySearch, BioSolution
+from .evaluator import BioEvaluator
+
+__version__ = "0.1.0"
+__all__ = [
+    "BioACDC",
+    "BioACDCConfig",
+    "BioTaskPool",
+    "ProteinTask",
+    "DNATask",
+    "BioModelMerger",
+    "LinearMerge",
+    "SlerpMerge",
+    "TaskVectorMerge",
+    "GaussianNoiseMutator",
+    "LayerScaleMutator",
+    "DropoutMutator",
+    "BioMutator",
+    "BioArchive",
+    "DominatedNoveltySearch",
+    "BioSolution",
+    "BioEvaluator",
+]