pyproject.toml

[build-system]
requires = ["setuptools>=61.0"]
build-backend = "setuptools.build_meta"

[project]
name = "phage-contramlm"
version = "1.1.0"
description = "A fine-tuned ProtT5 model using Contrastive + MLM loss for phage protein sequence representation."
readme = "README.md"
requires-python = ">=3.12"
dependencies = [
    "torch==2.6.0",
    "transformers==4.37.2",
    "peft==0.10.0",
    "pandas==3.0.1",
    "numpy==2.3.5",
    "matplotlib==3.10.8",
    "seaborn==0.13.2",
    "scikit-learn==1.8.0",
    "hnswlib==0.8.0",
    "safetensors==0.7.0",
    "sentencepiece==0.2.0"
]