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6d96029 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 | {
"paper_row": "K562 base flow (teacher for reflow)",
"dataset": "Replogle K562",
"run_dir": "runs/b200_k562_flow_bs2048_krrinit_mask_30k",
"backbone": "hf-assets/checkpoints/crispri_k562/scFATE_epoch700_periodic.pt",
"h5ad_rel": "datasets/scFATE/processed/replogle_k562/replogle_k562.h5ad",
"training_script": "scripts/train_flow.py",
"seed": 1,
"result_json": "experiments/results/fair_comparison/replogle_rotation_vs_direct__flow__b200_k562_flow_bs2048_krrinit_mask_30k_K128.json",
"teacher": null,
"teachers": null,
"launch_script": "runs/launch_tx_bch_combo.sh",
"checkpoint": {
"path": "runs/b200_k562_flow_bs2048_krrinit_mask_30k/flow_best.pt",
"size_mb": 46.5,
"files_in_dir": [
"config.json",
"flow_best.pt",
"flow_metrics.jsonl",
"krr_prior.pkl",
"reproduce.sh"
]
},
"hparams_top": {
"_v_net_state_dict_present": true,
"theta_dim": 192,
"d_embed": 1824,
"d_hidden": 512,
"n_blocks": 4,
"sigma": 0.05,
"n_steps": 20,
"epoch": 28000,
"loss": 3.408003710949113e-05,
"pert_names": "<list len=1093 sample=['AAMP', 'AARS', 'AATF', 'ABCB7', 'ABCE1']>",
"mv_gene_names": "<list len=1085 sample=['AAMP', 'AARS', 'AATF', 'ABCB7', 'ABCE1']>",
"prior": "krr",
"krr_gamma": 0.01,
"krr_alpha": 1.0
},
"hparams_nested": {}
} |