Create handler.py
Browse files- handler.py +144 -0
handler.py
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from typing import Dict, List, Any
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from transformers import AutoModelForVision2Seq, AutoTokenizer, AutoProcessor
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from PIL import Image
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import torch
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import io
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import base64
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from peft import PeftModel
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class EndpointHandler():
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def __init__(self, model_dir: str):
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self.path = model_dir
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# Load base model and tokenizer
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base_model_id = "Qwen/Qwen2-VL-2B-Instruct"
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# Load tokenizer/processor
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self.processor = AutoProcessor.from_pretrained(
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self.path,
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trust_remote_code=True
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)
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# Load base model
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self.model = AutoModelForVision2Seq.from_pretrained(
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base_model_id,
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torch_dtype=torch.float16,
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device_map="auto",
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trust_remote_code=True
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)
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# Load LoRA adapter
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self.model = PeftModel.from_pretrained(
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self.model,
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self.path,
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device_map="auto"
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)
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# Merge and unload for faster inference
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self.model = self.model.merge_and_unload()
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# Set to eval mode
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self.model.eval()
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# Store the instruction template
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self.instruction = """
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A conversation between a Healthcare Provider and an AI Medical Image Analysis Assistant. The provider shares a medical image, and the Assistant generates a clear description/report. The assistant first analyzes the image systematically, then provides a concise report. The analysis process and report are enclosed within <thinking> </thinking><answer> </answer>.
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Always respond in this format:
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<thinking>
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1. Initial Assessment:
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- What type of image is this? (X-ray, CT, MRI, etc.)
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- Which body part/region is shown?
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- Is the image quality adequate?
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2. Key Findings:
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- What are the normal structures visible?
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- Are there any abnormalities?
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- What are the important measurements?
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3. Clinical Significance:
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- What are the main clinical findings?
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- Are there any critical findings?
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</thinking>
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<answer>
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Brief Structured Report:
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1. EXAM TYPE: [imaging type and body region]
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2. FINDINGS: [key observations and abnormalities]
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3. IMPRESSION: [summary and clinical significance]
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</answer>
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"""
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def __call__(self, data: Dict[str, Any]) -> List[Dict[str, str]]:
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"""
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data args:
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inputs (:obj: `str` | `PIL.Image` | `np.array`)
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parameters (:obj: `Dict[str, Any]`, *optional*)
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Return:
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A :obj:`list` | `dict`: will be serialized and returned
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"""
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# Extract inputs and parameters
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inputs = data.pop("inputs", data)
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parameters = data.pop("parameters", {})
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# Handle different input formats
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if isinstance(inputs, str):
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# Base64 encoded image
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image_bytes = base64.b64decode(inputs)
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image = Image.open(io.BytesIO(image_bytes)).convert("RGB")
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elif isinstance(inputs, dict):
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# Dictionary with image key
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image_data = inputs.get("image", inputs.get("inputs", ""))
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if isinstance(image_data, str):
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image_bytes = base64.b64decode(image_data)
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image = Image.open(io.BytesIO(image_bytes)).convert("RGB")
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else:
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image = image_data
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else:
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# Direct image
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image = inputs
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# Ensure image is RGB
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if image.mode != "RGB":
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image = image.convert("RGB")
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# Prepare messages in Qwen format
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messages = [
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{
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"role": "user",
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"content": [
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{"type": "image", "image": image},
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{"type": "text", "text": self.instruction}
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]
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}
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]
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# Process inputs
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text = self.processor.apply_chat_template(
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messages,
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tokenize=False,
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add_generation_prompt=True
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)
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# Prepare inputs for model
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inputs = self.processor(
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text=[text],
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images=[image],
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padding=True,
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return_tensors="pt"
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).to(self.model.device)
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# Generate response
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with torch.no_grad():
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output_ids = self.model.generate(
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| 129 |
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**inputs,
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| 130 |
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max_new_tokens=parameters.get("max_new_tokens", 512),
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temperature=parameters.get("temperature", 0.7),
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top_p=parameters.get("top_p", 0.9),
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do_sample=True,
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pad_token_id=self.processor.tokenizer.pad_token_id,
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eos_token_id=self.processor.tokenizer.eos_token_id,
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)
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# Decode output - only the generated part
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output_text = self.processor.batch_decode(
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| 140 |
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output_ids[:, inputs.input_ids.shape[1]:],
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skip_special_tokens=True
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)[0]
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return [{"generated_text": output_text}]
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