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Sequence (every step logs; results land in reports/smoke_test.json and a markdown summary
is printed at the end):
1. device info, seed, config; ``PYTORCH_CUDA_ALLOC_CONF=expandable_segments:True`` set before
CUDA initialises (variable-size probing fragments the caching allocator otherwise).
2. build ``EncoderForMLM`` from config.yaml and print ``count_parameters``.
3. data: packed real pretraining text if data/processed/{pretrain.parquet,tokenizer.json}
exist, else random token ids. MLM masking exactly as configured (15%, 80/10/10, loss on
masked positions only, specials never masked).
4. micro-batch finder: per candidate, 1 warmup + 3 timed optimizer steps, each made of
two accumulated fwd/bwd micro-steps under bf16 autocast + fused AdamW. Two, not one,
because production accumulates: from the second micro-step on the fp32 gradients
(1.26 GiB) are resident while the next activation set is built, and that is the real
high-water mark (a single fwd/bwd/opt step under-reports it by one gradient copy).
Peak allocated/reserved recorded, OOMs caught; once without and once with gradient
checkpointing. The choice follows config.vram: the largest candidate whose reserved
peak sits in [target_gb_low, target_gb_high], else the largest under target_gb_high,
never above hard_cap_gb. The throughput run's own reserved peak is then checked
against the same cap and band as a second opinion.
5. throughput at the chosen micro-batch (no checkpointing): CUDA-event-timed micro-steps
with the real gradient-accumulation pattern (accumulation = round(256 / micro-batch);
the effective batch actually realised is reported, and a warning is logged when it is
not exactly 256), an isolated optimizer-step cost, tokens/s, and projected hours per
epoch / per 3 epochs. Epoch tokens come from --epoch-tokens, else from the data
manifest's pretraining character count times the tokens/char measured on the packed
sample, else the 117M estimate. Plus a check of which SDPA backend actually runs on
the mask-free (Flash) and masked (mem-efficient) paths.
6. mini convergence check from a fresh init: 30 steps at LR 1e-4 with a 10-step warmup.
The first loss should sit near ln(V) = 10.40; on real text it should fall visibly.
7. inference latency of ``EncoderForClassification`` for one 512-token email: GPU bf16
(100 samples), CPU fp32 at 512 and 128 tokens (10 samples), versus the instructor's
0.074 s/sample benchmark.
8. write the JSON report and print the summary.
CLI: python src/smoke_test.py [--steps 30] [--skip-cpu] [--candidates 16,24,12,8,4]
"""
import os
os.environ.setdefault("PYTORCH_CUDA_ALLOC_CONF", "expandable_segments:True")
import argparse # noqa: E402
import gc # noqa: E402
import logging # noqa: E402
import math # noqa: E402
import sys # noqa: E402
import time # noqa: E402
import warnings # noqa: E402
from dataclasses import asdict, dataclass # noqa: E402
from pathlib import Path # noqa: E402
from typing import Any # noqa: E402
sys.path.insert(0, str(Path(__file__).parent))
import torch # noqa: E402
import torch.nn.functional as F # noqa: E402
from torch import Tensor # noqa: E402
from torch.nn.attention import SDPBackend, sdpa_kernel # noqa: E402
import common # noqa: E402
from model import EncoderConfig, EncoderForClassification, EncoderForMLM, count_parameters # noqa: E402
GIB = float(2**30)
INSTRUCTOR_BENCHMARK_S = 0.074
DEFAULT_EPOCH_TOKENS = 117e6 # verify_data.md: ~117M tokens/epoch at 4 chars/token
PROBE_ACCUM = 2 # micro-steps per finder step: grads resident during the 2nd
VRAM_UNIT_NOTE = "config vram.*_gb values are read as GiB and compared with torch.cuda.max_memory_reserved() / 2**30"
LOG = logging.getLogger("smoke_test")
# ------------------------------------------------------------------------------ data
@dataclass
class TokenPool:
"""Fixed-length token sequences the test samples batches from."""
seqs: Tensor # [n, L] int64 on the training device
special_ids: list[int] # never masked, never used as MLM targets
mask_id: int
source: str # "real" | "random"
n_docs: int
detail: str
tokens_per_char: float | None = None # measured on the packed sample (real data only)
@property
def n(self) -> int:
return int(self.seqs.shape[0])
def batch(self, size: int, gen: torch.Generator) -> Tensor:
idx = torch.randint(self.n, (size,), device=self.seqs.device, generator=gen)
return self.seqs[idx]
def _special_ids_from_config(cfg: dict) -> tuple[list[int], int]:
specials = cfg["tokenizer"]["special_tokens"]
return list(range(len(specials))), specials.index("[MASK]")
def _text_columns(names: set[str], path: Path) -> list[str]:
cols = ["text"] if "text" in names else [c for c in ("subject", "body") if c in names]
if not cols:
raise ValueError(f"{path}: no text column among {sorted(names)}")
return cols
def _texts(batch) -> list[str]:
"""Model input text per row: the ``text`` column, else subject + blank line + body."""
names = set(batch.schema.names)
if "text" in names:
return [t or "" for t in batch.column("text").to_pylist()]
subj = batch.column("subject").to_pylist() if "subject" in names else [""] * batch.num_rows
body = batch.column("body").to_pylist()
return [f"{s or ''}\n\n{b or ''}" for s, b in zip(subj, body)]
def _assert_no_holdout_overlap(texts: list[str], holdout: Path) -> None:
"""The hard no-leak rule, checked on the exact documents this run packs: none may
equal a held-out TREC-06 email under the verify_data.md sec. 7 normalisation
(lowercase, [a-z0-9] only). Cheap (one sha1 per row) and independent of whatever
bookkeeping the data pipeline recorded."""
if not holdout.exists():
LOG.warning("no holdout parquet at %s; in-code leak check skipped", holdout)
return
import pyarrow.parquet as pq
pf = pq.ParquetFile(holdout)
cols = _text_columns(set(pf.schema_arrow.names), holdout)
hold: set[str] = set()
for batch in pf.iter_batches(batch_size=4096, columns=cols):
hold.update(common.sha1_hex(n) for n in map(common.normalize_text, _texts(batch)) if n)
hits = sum(common.sha1_hex(n) in hold for n in map(common.normalize_text, texts) if n)
assert hits == 0, f"{hits} pretraining documents match held-out emails in {holdout}"
LOG.info("no-leak check: 0 of %d packed docs match the %d holdout emails", len(texts), len(hold))
def build_token_pool(cfg: dict, mcfg: EncoderConfig, device: torch.device,
n_docs: int, random_seqs: int) -> TokenPool:
"""Real packed text when the data agent's artefacts exist, else random ids.
Packing follows the pretraining recipe: documents are concatenated with [SEP]
between them and cut into max_seq_len windows (RoBERTa FULL-SENTENCES), which is
what keeps the Flash backend eligible (no padding -> no mask).
"""
L = mcfg.max_seq_len
processed = Path(cfg["paths"]["data_processed"])
parquet = processed / "pretrain.parquet"
tok_path = Path(cfg["paths"]["tokenizer"])
if parquet.exists() and tok_path.exists():
import pyarrow.parquet as pq
from tokenizers import Tokenizer
pf = pq.ParquetFile(parquet)
names = set(pf.schema_arrow.names)
source_col = next((c for c in ("source", "dataset_name", "dataset") if c in names), None)
cols = _text_columns(names, parquet) + ([source_col] if source_col else [])
table = next(pf.iter_batches(batch_size=n_docs, columns=cols))
if source_col:
# Hard rule: the TREC-06 holdout must never reach pretraining text.
srcs = {str(s).lower().replace("_", "-") for s in table.column(source_col).to_pylist()}
assert not any("trec-06" in s or "trec06" in s for s in srcs), f"TREC-06 rows in {parquet}"
texts = _texts(table)
_assert_no_holdout_overlap(texts, processed / "test_holdout.parquet")
tok = Tokenizer.from_file(str(tok_path))
special_ids = [i for i in (tok.token_to_id(s) for s in cfg["tokenizer"]["special_tokens"]) if i is not None]
sep_id, mask_id = tok.token_to_id("[SEP]"), tok.token_to_id("[MASK]")
assert sep_id is not None and mask_id is not None, "tokenizer lacks [SEP]/[MASK]"
assert tok.get_vocab_size() <= mcfg.vocab_size, "tokenizer vocab larger than model vocab"
stream: list[int] = []
for enc in tok.encode_batch(texts, add_special_tokens=False):
stream.extend(enc.ids)
stream.append(sep_id)
n_seq = len(stream) // L
if n_seq < 1:
raise ValueError("not enough text to pack a single sequence")
seqs = torch.tensor(stream[: n_seq * L], dtype=torch.long).view(n_seq, L).to(device)
n_chars = sum(len(t) for t in texts)
tpc = len(stream) / n_chars if n_chars else None
return TokenPool(seqs, special_ids, mask_id, "real", len(texts),
f"{len(texts)} docs ({n_chars:,} chars) -> {len(stream):,} tokens -> {n_seq} packed x {L}",
tokens_per_char=tpc)
special_ids, mask_id = _special_ids_from_config(cfg)
gen = torch.Generator(device="cpu").manual_seed(cfg["seed"])
seqs = torch.randint(len(special_ids), mcfg.vocab_size, (random_seqs, L), generator=gen).to(device)
return TokenPool(seqs, special_ids, mask_id, "random", 0,
f"{random_seqs} random x {L} ids in [{len(special_ids)}, {mcfg.vocab_size})")
def mlm_mask(ids: Tensor, pool: TokenPool, vocab_size: int, p: float, replace_probs: list[float],
gen: torch.Generator) -> tuple[Tensor, Tensor, Tensor]:
"""BERT dynamic masking: select ``p`` of the non-special positions; of those, replace
80% with [MASK], 10% with a random token, leave 10% unchanged. Returns
``(inputs, labels_at_masked, masked_positions)`` so the model can gather before the head.
"""
special = torch.isin(ids, torch.tensor(pool.special_ids, device=ids.device))
sel = (torch.rand(ids.shape, device=ids.device, generator=gen) < p) & ~special
if not bool(sel.any()):
first = (~special).view(-1).nonzero()[0]
sel.view(-1)[first] = True
labels = ids[sel]
inputs = ids.clone()
r = torch.rand(ids.shape, device=ids.device, generator=gen)
p_mask, p_rand, _ = replace_probs
to_mask = sel & (r < p_mask)
to_rand = sel & (r >= p_mask) & (r < p_mask + p_rand)
inputs[to_mask] = pool.mask_id
n_rand = int(to_rand.sum())
if n_rand:
inputs[to_rand] = torch.randint(len(pool.special_ids), vocab_size, (n_rand,),
device=ids.device, generator=gen)
return inputs, labels, sel
# ------------------------------------------------------------------------ training bits
def build_model(mcfg: EncoderConfig, device: torch.device, seed: int) -> EncoderForMLM:
common.set_seed(seed)
with torch.device(device):
model = EncoderForMLM(mcfg)
return model.train()
def build_optimizer(model: torch.nn.Module, lr: float, pcfg: dict) -> torch.optim.AdamW:
"""AdamW with weight decay only on matrices (biases and LayerNorm excluded), fused."""
decay = [p for p in model.parameters() if p.requires_grad and p.ndim >= 2]
no_decay = [p for p in model.parameters() if p.requires_grad and p.ndim < 2]
groups = [{"params": decay, "weight_decay": pcfg["weight_decay"]},
{"params": no_decay, "weight_decay": 0.0}]
kw: dict[str, Any] = dict(lr=lr, betas=tuple(pcfg["betas"]), eps=pcfg["eps"])
try:
return torch.optim.AdamW(groups, fused=True, **kw)
except (TypeError, RuntimeError) as e: # fused unavailable on this build/device
LOG.warning("fused AdamW unavailable (%s); falling back to foreach", e)
return torch.optim.AdamW(groups, **kw)
class Trainer:
"""Minimal MLM step machinery shared by the finder, the throughput run and the
convergence check, so all three measure the same code path the real trainer will use."""
def __init__(self, model: EncoderForMLM, opt: torch.optim.AdamW, pool: TokenPool,
cfg: dict, mcfg: EncoderConfig, gen: torch.Generator) -> None:
self.model, self.opt, self.pool, self.gen = model, opt, pool, gen
self.vocab = mcfg.vocab_size
p = cfg["pretrain"]
self.p_mask = p["mlm_probability"]
self.replace_probs = list(p["mask_replace_probs"])
self.grad_clip = p["grad_clip"]
def fwd_bwd(self, micro_batch: int, loss_scale: float = 1.0) -> float:
ids = self.pool.batch(micro_batch, self.gen)
inputs, labels, pos = mlm_mask(ids, self.pool, self.vocab, self.p_mask, self.replace_probs, self.gen)
with torch.autocast(device_type="cuda", dtype=torch.bfloat16):
logits = self.model(inputs, attention_mask=None, masked_positions=pos)
loss = F.cross_entropy(logits, labels)
(loss * loss_scale).backward()
return float(loss.detach())
def opt_step(self) -> None:
torch.nn.utils.clip_grad_norm_(self.model.parameters(), self.grad_clip)
self.opt.step()
self.opt.zero_grad(set_to_none=True)
def step(self, micro_batch: int) -> float:
loss = self.fwd_bwd(micro_batch)
self.opt_step()
return loss
def accum_step(self, micro_batch: int, accum: int) -> float:
"""One optimizer step from ``accum`` accumulated micro-steps: the production
pattern. From the second micro-step on, the fp32 ``.grad`` tensors of the whole
model (4 B/param = 1.26 GiB) are resident while a fresh activation set is built,
so this is the pattern that exposes the true peak; a lone fwd/bwd/opt step
measures one gradient copy too little. Returns the mean micro-step loss."""
total = 0.0
for _ in range(accum):
total += self.fwd_bwd(micro_batch, 1.0 / accum)
self.opt_step()
return total / accum
def release(self) -> None:
self.opt.zero_grad(set_to_none=True)
gc.collect()
torch.cuda.empty_cache()
# ------------------------------------------------------------------------- step 4: finder
@dataclass
class ProbeResult:
micro_batch: int
grad_checkpointing: bool
ok: bool
steps: int # timed optimizer steps, each of `micro_steps` accumulated fwd/bwd
micro_steps: int
max_allocated_gib: float
max_reserved_gib: float
device_used_after_gib: float
ms_per_micro_step: float | None # includes 1/micro_steps of an optimizer step: rough, see throughput
tokens_per_s: float | None
error: str | None
def probe(trainer: Trainer, micro_batch: int, steps: int, seq_len: int, ckpt: bool) -> ProbeResult:
trainer.model.config.grad_checkpointing = ckpt
trainer.release()
torch.cuda.synchronize()
torch.cuda.reset_peak_memory_stats()
ok, err, ms = True, None, None
try:
# One untimed step absorbs cuBLAS/allocator warmup at this shape and allocates the
# AdamW state; the peak-memory window covers it too. Every step uses the
# accumulation pattern so the resident-gradient peak is part of the measurement.
trainer.accum_step(micro_batch, PROBE_ACCUM)
torch.cuda.synchronize()
t0 = common.timer()
for _ in range(steps):
trainer.accum_step(micro_batch, PROBE_ACCUM)
torch.cuda.synchronize()
ms = (common.timer() - t0) * 1000.0 / (steps * PROBE_ACCUM)
except torch.OutOfMemoryError as e:
ok = False
err = str(e).splitlines()[0][:240]
LOG.warning("B=%d ckpt=%s: OOM -> %s", micro_batch, ckpt, err)
peak_alloc = torch.cuda.max_memory_allocated() / GIB
peak_res = torch.cuda.max_memory_reserved() / GIB
free, total = torch.cuda.mem_get_info()
trainer.release()
tok_s = micro_batch * seq_len / (ms / 1000.0) if ms else None
r = ProbeResult(micro_batch, ckpt, ok, steps, PROBE_ACCUM, round(peak_alloc, 3), round(peak_res, 3),
round((total - free) / GIB, 3), round(ms, 1) if ms else None,
round(tok_s) if tok_s else None, err)
LOG.info("probe B=%d ckpt=%s ok=%s peak_alloc=%.2f GiB peak_reserved=%.2f GiB ms/micro-step=%s tok/s=%s",
r.micro_batch, ckpt, ok, peak_alloc, peak_res, r.ms_per_micro_step, r.tokens_per_s)
return r
def choose_micro_batch(results: list[ProbeResult], low: float, high: float, cap: float) -> tuple[int | None, str]:
fit = [r for r in results if r.ok and r.max_reserved_gib <= cap]
in_band = [r for r in fit if low <= r.max_reserved_gib <= high]
if in_band:
b = max(in_band, key=lambda r: r.micro_batch)
return b.micro_batch, f"largest candidate with reserved peak in [{low}, {high}] GiB ({b.max_reserved_gib} GiB)"
under = [r for r in fit if r.max_reserved_gib <= high]
if under:
b = max(under, key=lambda r: r.micro_batch)
return b.micro_batch, f"no candidate reached {low} GiB; largest under {high} GiB ({b.max_reserved_gib} GiB)"
if fit:
b = min(fit, key=lambda r: r.micro_batch)
return b.micro_batch, f"WARNING every fitting candidate exceeds {high} GiB; smallest under the {cap} GiB cap ({b.max_reserved_gib} GiB)"
return None, "no candidate fits under the hard cap"
# --------------------------------------------------------------------- step 5: throughput
def measure_throughput(trainer: Trainer, micro_batch: int, seq_len: int, eff_batch: int,
timed_steps: int, warmup_steps: int, epoch_tokens: float) -> dict[str, Any]:
trainer.model.config.grad_checkpointing = False
trainer.release()
torch.cuda.synchronize()
torch.cuda.reset_peak_memory_stats()
# Nearest integer, not floor: 256 is divisible by neither 24 nor 12, and every number
# below must describe the batch that is actually realised (floor would silently train
# at 240 while reporting 256). The realised batch is reported next to the target.
accum = max(1, round(eff_batch / micro_batch))
eff_actual = accum * micro_batch
if eff_actual != eff_batch:
LOG.warning("effective batch %d (= %d x %d) differs from the configured %d because %d is not a divisor; "
"tokens/s, steps/epoch and hours below use the realised %d",
eff_actual, accum, micro_batch, eff_batch, micro_batch, eff_actual)
scale = 1.0 / accum
def micro(i: int) -> None:
trainer.fwd_bwd(micro_batch, scale)
if (i + 1) % accum == 0:
trainer.opt_step()
for i in range(warmup_steps):
micro(i)
trainer.release()
torch.cuda.synchronize()
start, end = torch.cuda.Event(enable_timing=True), torch.cuda.Event(enable_timing=True)
start.record()
for i in range(timed_steps):
micro(i)
end.record()
torch.cuda.synchronize()
elapsed_ms = start.elapsed_time(end)
opt_steps_in_window = timed_steps // accum
trainer.release()
# Isolated optimizer-step cost (clip + fused AdamW + zero_grad), amortised over `accum`.
opt_ms = []
for _ in range(3):
trainer.fwd_bwd(micro_batch, scale)
torch.cuda.synchronize()
s, e = torch.cuda.Event(enable_timing=True), torch.cuda.Event(enable_timing=True)
s.record()
trainer.opt_step()
e.record()
torch.cuda.synchronize()
opt_ms.append(s.elapsed_time(e))
trainer.release()
ms_opt = sum(opt_ms) / len(opt_ms)
ms_fwd_bwd = (elapsed_ms - opt_steps_in_window * ms_opt) / timed_steps
ms_micro_raw = elapsed_ms / timed_steps
tokens_per_micro = micro_batch * seq_len
tok_s_raw = tokens_per_micro / (ms_micro_raw / 1000.0)
ms_per_opt_step = accum * ms_fwd_bwd + ms_opt
tok_s_eff = eff_actual * seq_len / (ms_per_opt_step / 1000.0)
steps_per_epoch = epoch_tokens / (eff_actual * seq_len)
hours_epoch = epoch_tokens / tok_s_eff / 3600.0
vram = common.vram_stats()
out = {
"micro_batch": micro_batch, "grad_accumulation": accum, "effective_batch": eff_actual,
"effective_batch_target": eff_batch, "effective_batch_matches_target": eff_actual == eff_batch,
"peak_reserved_gib": round(vram["max_reserved_gb"], 3), "peak_allocated_gib": round(vram["max_allocated_gb"], 3),
"timed_micro_steps": timed_steps, "warmup_micro_steps": warmup_steps,
"ms_per_micro_step_raw": round(ms_micro_raw, 2), "ms_fwd_bwd": round(ms_fwd_bwd, 2),
"ms_optimizer_step": round(ms_opt, 2), "ms_per_optimizer_step_total": round(ms_per_opt_step, 1),
"tokens_per_s_raw": round(tok_s_raw), "tokens_per_s_effective": round(tok_s_eff),
"epoch_tokens": epoch_tokens, "optimizer_steps_per_epoch": round(steps_per_epoch),
"hours_per_epoch": round(hours_epoch, 2), "hours_3_epochs": round(3 * hours_epoch, 2),
"vram": vram,
}
LOG.info("throughput: %s", out)
return out
def resolve_epoch_tokens(override: float | None, pool: TokenPool, processed: Path) -> tuple[float, str]:
"""Tokens per pretraining epoch for the ETA: an explicit --epoch-tokens wins; else the
data manifest's pretraining character count scaled by the tokens/char measured on the
packed sample (the only place the real tokenizer and the real corpus meet); else the
research estimate."""
if override is not None:
return float(override), "--epoch-tokens"
manifest = processed / "splits_manifest.json"
if pool.tokens_per_char and manifest.exists():
m = common.read_json(manifest)
chars = int(m["counts"]["totals"]["pretrain"]["chars"])
note = " [dev subsample]" if m.get("dev_subsample") else ""
return chars * pool.tokens_per_char, f"splits_manifest.json {chars:,} chars x {pool.tokens_per_char:.4f} tok/char{note}"
return DEFAULT_EPOCH_TOKENS, "verify_data.md estimate (117M tokens at 4 chars/token)"
def check_sdpa_backends(model: EncoderForMLM, seq_len: int, vocab: int) -> dict[str, Any]:
"""Which fused kernel actually runs. Flash must take the mask-free (packed) path and
memory-efficient the bool-mask path; a silent math fallback would store the LxL
softmax and blow the activation budget."""
model.config.grad_checkpointing = False
ids = torch.randint(5, vocab, (2, seq_len), device="cuda")
mask = torch.ones(2, seq_len, dtype=torch.bool, device="cuda")
mask[1, seq_len // 2:] = False
cases = {
"flash_no_mask": ([SDPBackend.FLASH_ATTENTION], None),
"efficient_bool_mask": ([SDPBackend.EFFICIENT_ATTENTION], mask),
"flash_bool_mask_expected_fail": ([SDPBackend.FLASH_ATTENTION], mask),
}
out: dict[str, Any] = {}
for name, (backends, m) in cases.items():
try:
with warnings.catch_warnings():
warnings.simplefilter("ignore")
with sdpa_kernel(backends), torch.autocast(device_type="cuda", dtype=torch.bfloat16):
h = model.encoder(ids, m)
h.float().mean().backward()
out[name] = "ran"
except RuntimeError as e:
out[name] = f"unavailable: {str(e).splitlines()[0][:100]}"
model.zero_grad(set_to_none=True)
out["flags"] = {
"flash_sdp_enabled": torch.backends.cuda.flash_sdp_enabled(),
"mem_efficient_sdp_enabled": torch.backends.cuda.mem_efficient_sdp_enabled(),
"math_sdp_enabled": torch.backends.cuda.math_sdp_enabled(),
}
LOG.info("sdpa backends: %s", out)
return out
# -------------------------------------------------------------------- step 6: convergence
def convergence_check(cfg: dict, mcfg: EncoderConfig, pool: TokenPool, device: torch.device,
micro_batch: int, steps: int, lr: float, warmup: int) -> dict[str, Any]:
model = build_model(mcfg, device, cfg["seed"] + 1)
opt = build_optimizer(model, lr, cfg["pretrain"])
gen = torch.Generator(device=device).manual_seed(cfg["seed"] + 1)
tr = Trainer(model, opt, pool, cfg, mcfg, gen)
losses: list[tuple[int, float]] = []
for step in range(1, steps + 1):
for g in opt.param_groups:
g["lr"] = lr * min(1.0, step / max(1, warmup))
loss = tr.step(micro_batch)
if not math.isfinite(loss):
LOG.error("non-finite loss at step %d", step)
losses.append((step, loss))
break
if step == 1 or step % 5 == 0 or step == steps:
losses.append((step, round(loss, 4)))
LOG.info("convergence step %3d/%d loss %.4f lr %.2e", step, steps, loss, opt.param_groups[0]["lr"])
tr.release()
first, last = losses[0][1], losses[-1][1]
out = {
"micro_batch": micro_batch, "steps": steps, "lr": lr, "warmup_steps": warmup,
"ln_vocab": round(math.log(mcfg.vocab_size), 4), "first_loss": first, "last_loss": last,
"drop": round(first - last, 4), "losses": losses, "data": pool.source,
"vram": common.vram_stats(),
}
del tr, opt, model
gc.collect()
torch.cuda.empty_cache()
return out
# ------------------------------------------------------------------------ step 7: latency
def _time_gpu(fn, n: int, warmup: int) -> dict[str, float]:
for _ in range(warmup):
fn()
torch.cuda.synchronize()
times = []
for _ in range(n):
s, e = torch.cuda.Event(enable_timing=True), torch.cuda.Event(enable_timing=True)
s.record()
fn()
e.record()
torch.cuda.synchronize()
times.append(s.elapsed_time(e))
times.sort()
return {"n": n, "avg_ms": round(sum(times) / n, 2), "p50_ms": round(times[n // 2], 2), "max_ms": round(times[-1], 2)}
def _time_cpu(fn, n: int, warmup: int) -> dict[str, float]:
for _ in range(warmup):
fn()
times = []
for _ in range(n):
t0 = time.perf_counter()
fn()
times.append((time.perf_counter() - t0) * 1000.0)
times.sort()
return {"n": n, "avg_ms": round(sum(times) / n, 1), "p50_ms": round(times[n // 2], 1), "max_ms": round(times[-1], 1)}
def inference_latency(cfg: dict, mcfg: EncoderConfig, device: torch.device, seq_len: int,
gpu_samples: int, cpu_samples: int, cpu_threads: int, skip_cpu: bool) -> dict[str, Any]:
common.set_seed(cfg["seed"])
with torch.device(device):
clf = EncoderForClassification(mcfg)
clf.eval()
out: dict[str, Any] = {"instructor_benchmark_ms": INSTRUCTOR_BENCHMARK_S * 1000.0, "params": count_parameters(clf)["total"]}
ids = torch.randint(5, mcfg.vocab_size, (1, seq_len), device=device)
full_mask = torch.ones(1, seq_len, dtype=torch.bool, device=device)
with torch.inference_mode(), torch.autocast(device_type="cuda", dtype=torch.bfloat16):
out[f"gpu_bf16_{seq_len}_no_mask"] = _time_gpu(lambda: clf(ids), gpu_samples, 10)
out[f"gpu_bf16_{seq_len}_bool_mask"] = _time_gpu(lambda: clf(ids, full_mask), gpu_samples, 10)
LOG.info("GPU latency: %s", {k: v for k, v in out.items() if k.startswith("gpu")})
if not skip_cpu:
clf = clf.cpu().float()
torch.set_num_threads(cpu_threads)
out["cpu_threads"] = torch.get_num_threads()
with torch.inference_mode():
for L in (seq_len, 128):
x = ids[:, :L].cpu()
out[f"cpu_fp32_{L}"] = _time_cpu(lambda: clf(x), cpu_samples, 2)
LOG.info("CPU fp32 L=%d: %s", L, out[f"cpu_fp32_{L}"])
del clf
gc.collect()
torch.cuda.empty_cache()
return out
# ------------------------------------------------------------------------------ report
def _probe_table(rows: list[ProbeResult]) -> str:
head = "| micro-batch | ckpt | result | peak alloc GiB | peak reserved GiB | device used GiB | ms/micro-step | tok/s |\n|---|---|---|---|---|---|---|---|"
lines = [head]
for r in rows:
res = "ok" if r.ok else "OOM"
lines.append(f"| {r.micro_batch} | {'on' if r.grad_checkpointing else 'off'} | {res} | {r.max_allocated_gib:.2f} | "
f"{r.max_reserved_gib:.2f} | {r.device_used_after_gib:.2f} | {r.ms_per_micro_step or '-'} | "
f"{f'{r.tokens_per_s:,}' if r.tokens_per_s else '-'} |")
return "\n".join(lines)
def markdown_summary(rep: dict[str, Any]) -> str:
d = rep["device"]
vr = rep["vram_policy"]
lines = [
"## Smoke test summary",
f"- device: {d.get('device', 'cpu')} (sm {d.get('sm', '?')}, {d.get('vram_gib', '?')} GiB, bf16={d.get('bf16', '?')}); "
f"torch {d.get('torch')} / python {d.get('python')}; device used before model build: {rep['baseline_device_used_gib']} GiB",
f"- model: {rep['param_counts']['mlm']['total']:,} params (MLM, tied) / {rep['param_counts']['classifier']['total']:,} (classifier)",
f"- data: {rep['data']['source']} -- {rep['data']['detail']}",
f"- VRAM policy: target [{vr['target_gb_low']}, {vr['target_gb_high']}] GiB reserved, hard cap {vr['hard_cap_gb']} GiB, alloc_conf={vr['alloc_conf']} ({VRAM_UNIT_NOTE})",
"", f"### Micro-batch finder (no checkpointing; {rep['finder']['probe_steps']} timed optimizer steps of "
f"{PROBE_ACCUM} accumulated micro-steps after 1 warmup step per candidate; grads resident during the 2nd micro-step)",
_probe_table([ProbeResult(**r) for r in rep['finder']['no_ckpt']]),
f"\n**chosen micro-batch: {rep['finder']['chosen_micro_batch']}** -- {rep['finder']['reason']}",
]
fin = rep["finder"]
if fin.get("throughput_peak_reserved_gib") is not None:
verdict = ("WITHIN the hard cap" if fin["throughput_within_hard_cap"] else "**BREACHES the hard cap**")
band = "in the target band" if fin["throughput_in_target_band"] else "outside the target band"
lines.append(f"- second opinion from the throughput run (real accumulation at the chosen batch): "
f"{fin['throughput_peak_reserved_gib']} GiB reserved peak -- {verdict}, {band}")
lines += [
"", "### Micro-batch finder (gradient checkpointing on, ~x1.33 compute)", _probe_table([ProbeResult(**r) for r in rep['finder']['ckpt']]),
f"\ncheckpointing choice: {rep['finder']['chosen_micro_batch_ckpt']} -- {rep['finder']['reason_ckpt']}",
]
t = rep.get("throughput")
if t:
eff_note = "" if t["effective_batch_matches_target"] else f" (**target {t['effective_batch_target']} not divisible by {t['micro_batch']}; all numbers use {t['effective_batch']}**)"
lines += [
"", "### Throughput (chosen micro-batch, no checkpointing)",
f"- micro-batch {t['micro_batch']} x accumulation {t['grad_accumulation']} = effective {t['effective_batch']} sequences{eff_note}",
f"- fwd+bwd {t['ms_fwd_bwd']} ms/micro-step, optimizer step {t['ms_optimizer_step']} ms -> {t['ms_per_optimizer_step_total']} ms per optimizer step",
f"- **{t['tokens_per_s_effective']:,} tokens/s** effective ({t['tokens_per_s_raw']:,} raw over {t['timed_micro_steps']} timed micro-steps); peak reserved {t['peak_reserved_gib']} GiB",
f"- {t['epoch_tokens']/1e6:.1f}M-token epoch ({t.get('epoch_tokens_source', '?')}) = {t['optimizer_steps_per_epoch']} optimizer steps -> "
f"**{t['hours_per_epoch']} h/epoch, {t['hours_3_epochs']} h for 3 epochs**",
]
s = rep.get("sdpa_backends")
if s:
lines += ["", "### SDPA backends", *(f"- {k}: {v}" for k, v in s.items())]
c = rep.get("convergence")
if c:
lines += [
"", "### Mini convergence check",
f"- {c['steps']} steps at micro-batch {c['micro_batch']}, LR {c['lr']:.0e} with {c['warmup_steps']}-step warmup, data={c['data']}",
f"- ln(V) = {c['ln_vocab']}; first loss {c['first_loss']}, last loss {c['last_loss']} (drop {c['drop']})",
"- trace: " + ", ".join(f"{st}:{lo}" for st, lo in c["losses"]),
]
lat = rep.get("latency")
if lat:
lines += ["", "### Inference latency (batch 1), instructor benchmark 74 ms/sample",
"| setting | n | avg ms | p50 ms | max ms | vs 74 ms |", "|---|---|---|---|---|---|"]
for k, v in lat.items():
if isinstance(v, dict) and "avg_ms" in v:
ratio = v["avg_ms"] / lat["instructor_benchmark_ms"]
lines.append(f"| {k} | {v['n']} | {v['avg_ms']} | {v['p50_ms']} | {v['max_ms']} | {ratio:.2f}x |")
lines += ["", f"total runtime: {rep['runtime_s']} s; report: {rep['report_path']}"]
return "\n".join(lines)
# -------------------------------------------------------------------------------- main
def parse_args(argv: list[str] | None = None) -> argparse.Namespace:
ap = argparse.ArgumentParser(description=__doc__.split("\n\n")[0])
ap.add_argument("--config", default="config.yaml")
ap.add_argument("--steps", type=int, default=30, help="optimizer steps for the convergence check")
ap.add_argument("--skip-cpu", action="store_true", help="skip the CPU fp32 latency samples")
ap.add_argument("--candidates", default=None,
help="comma list of micro-batches to probe (default: config pretrain.micro_batch_candidates "
"if present, else micro_batch_start,24,12,8,4)")
ap.add_argument("--ckpt-candidates", default=None, help="micro-batches for the checkpointing sweep (default: same)")
ap.add_argument("--probe-steps", type=int, default=3)
ap.add_argument("--timed-steps", type=int, default=20)
ap.add_argument("--n-docs", type=int, default=3000, help="real documents to pack when the parquet exists")
ap.add_argument("--random-seqs", type=int, default=1024, help="random sequences when no real data exists")
ap.add_argument("--epoch-tokens", type=float, default=None,
help="tokens per pretraining epoch for the ETA (default: data manifest chars x measured tokens/char, else 117e6)")
ap.add_argument("--conv-lr", type=float, default=1e-4)
ap.add_argument("--conv-warmup", type=int, default=10)
ap.add_argument("--cpu-threads", type=int, default=16)
ap.add_argument("--latency-samples", type=int, default=None, help="GPU latency samples (default config.eval.latency_samples)")
return ap.parse_args(argv)
def main(argv: list[str] | None = None) -> int:
args = parse_args(argv)
t_start = common.timer()
cfg = common.load_config(args.config)
logger = common.setup_logging("smoke_test", cfg["paths"]["logs"])
global LOG
LOG = logger
device_info = common.print_device_info()
if not torch.cuda.is_available():
LOG.error("CUDA is required for the smoke test")
return 2
LOG.info("PYTORCH_CUDA_ALLOC_CONF=%s", os.environ.get("PYTORCH_CUDA_ALLOC_CONF"))
common.set_seed(cfg["seed"])
device = torch.device("cuda")
mcfg = EncoderConfig.from_dict(cfg["model"])
L = mcfg.max_seq_len
vr = cfg["vram"]
pcfg = cfg["pretrain"]
free, total = torch.cuda.mem_get_info()
baseline_used = round((total - free) / GIB, 2)
LOG.info("device used before model build (desktop + others): %.2f GiB", baseline_used)
# 2. model
model = build_model(mcfg, device, cfg["seed"])
mlm_counts = count_parameters(model)
LOG.info("EncoderForMLM params: %s", mlm_counts)
print(f"EncoderForMLM: total {mlm_counts['total']:,} | embeddings {mlm_counts['embeddings']:,} | "
f"layers {mlm_counts['encoder_layers']:,} | final_norm {mlm_counts['final_norm']:,} | head {mlm_counts['head']:,}")
with torch.device("meta"):
cls_counts = count_parameters(EncoderForClassification(mcfg))
LOG.info("EncoderForClassification params: %s", cls_counts)
LOG.info("after model build: %s", common.vram_stats())
# 3. data
pool = build_token_pool(cfg, mcfg, device, args.n_docs, args.random_seqs)
LOG.info("token pool: %s -> %s", pool.source, pool.detail)
# 4. finder
opt = build_optimizer(model, pcfg["lr"], pcfg)
gen = torch.Generator(device=device).manual_seed(cfg["seed"])
trainer = Trainer(model, opt, pool, cfg, mcfg, gen)
start = int(pcfg["micro_batch_start"])
default_cands = ([int(b) for b in pcfg["micro_batch_candidates"]] if pcfg.get("micro_batch_candidates")
else [start] + [b for b in (24, 12, 8, 4) if b != start])
cands = [int(x) for x in args.candidates.split(",")] if args.candidates else default_cands
ckpt_cands = [int(x) for x in args.ckpt_candidates.split(",")] if args.ckpt_candidates else cands
cands = [b for b in cands if b <= pool.n] or [pool.n]
ckpt_cands = [b for b in ckpt_cands if b <= pool.n] or [pool.n]
LOG.info("finder candidates: %s (no ckpt), %s (ckpt)", cands, ckpt_cands)
# probe() flips grad_checkpointing on model.config, which IS mcfg (same dataclass
# instance); remember the config.yaml value so later model builds inherit it, not the
# last probe's setting.
ckpt_default = bool(mcfg.grad_checkpointing)
no_ckpt = [probe(trainer, b, args.probe_steps, L, ckpt=False) for b in cands]
chosen, reason = choose_micro_batch(no_ckpt, vr["target_gb_low"], vr["target_gb_high"], vr["hard_cap_gb"])
LOG.info("chosen micro-batch (no ckpt): %s -- %s", chosen, reason)
with_ckpt = [probe(trainer, b, args.probe_steps, L, ckpt=True) for b in ckpt_cands]
chosen_ckpt, reason_ckpt = choose_micro_batch(with_ckpt, vr["target_gb_low"], vr["target_gb_high"], vr["hard_cap_gb"])
LOG.info("chosen micro-batch (ckpt): %s -- %s", chosen_ckpt, reason_ckpt)
mcfg.grad_checkpointing = ckpt_default
report: dict[str, Any] = {
"timestamp": time.strftime("%Y-%m-%d %H:%M:%S"),
"device": device_info,
"alloc_conf": os.environ.get("PYTORCH_CUDA_ALLOC_CONF"),
"baseline_device_used_gib": baseline_used,
"model_config": mcfg.to_dict(),
"param_counts": {"mlm": mlm_counts, "classifier": cls_counts},
"data": {"source": pool.source, "detail": pool.detail, "n_sequences": pool.n, "seq_len": L,
"mlm_probability": pcfg["mlm_probability"], "mask_replace_probs": pcfg["mask_replace_probs"]},
"vram_policy": vr,
"vram_policy_unit": VRAM_UNIT_NOTE,
"finder": {"candidates": cands, "ckpt_candidates": ckpt_cands, "probe_steps": args.probe_steps,
"micro_steps_per_probe_step": PROBE_ACCUM,
"no_ckpt": [asdict(r) for r in no_ckpt], "ckpt": [asdict(r) for r in with_ckpt],
"chosen_micro_batch": chosen, "reason": reason,
"chosen_micro_batch_ckpt": chosen_ckpt, "reason_ckpt": reason_ckpt},
}
if chosen is None:
LOG.error("no micro-batch fits; skipping throughput and convergence")
else:
# 5. throughput + backend check
epoch_tokens, epoch_src = resolve_epoch_tokens(args.epoch_tokens, pool, Path(cfg["paths"]["data_processed"]))
LOG.info("epoch tokens for the ETA: %.3g (%s)", epoch_tokens, epoch_src)
tp = measure_throughput(trainer, chosen, L, int(pcfg["effective_batch_sequences"]), args.timed_steps, 3, epoch_tokens)
tp["epoch_tokens_source"] = epoch_src
report["throughput"] = tp
# The throughput run is the chosen batch under the real accumulation pattern over
# many more micro-steps than the probe; its reserved peak is the second opinion on
# the finder's decision against the same cap and band.
fin = report["finder"]
fin["throughput_peak_reserved_gib"] = tp["peak_reserved_gib"]
fin["throughput_within_hard_cap"] = tp["peak_reserved_gib"] <= vr["hard_cap_gb"]
fin["throughput_in_target_band"] = vr["target_gb_low"] <= tp["peak_reserved_gib"] <= vr["target_gb_high"]
if not fin["throughput_within_hard_cap"]:
LOG.error("micro-batch %d breaches the %s GiB hard cap under real accumulation (%.2f GiB reserved); "
"do not train at this batch", chosen, vr["hard_cap_gb"], tp["peak_reserved_gib"])
elif not fin["throughput_in_target_band"]:
LOG.warning("micro-batch %d: %.2f GiB reserved under real accumulation is outside the [%s, %s] GiB band",
chosen, tp["peak_reserved_gib"], vr["target_gb_low"], vr["target_gb_high"])
report["sdpa_backends"] = check_sdpa_backends(model, L, mcfg.vocab_size)
trainer.release()
del trainer, opt, model
gc.collect()
torch.cuda.empty_cache()
if chosen is not None:
# 6. convergence from a fresh init
report["convergence"] = convergence_check(cfg, mcfg, pool, device, chosen, args.steps, args.conv_lr, args.conv_warmup)
# 7. latency
del pool
gc.collect()
torch.cuda.empty_cache()
n_lat = args.latency_samples or int(cfg["eval"]["latency_samples"])
report["latency"] = inference_latency(cfg, mcfg, device, L, n_lat, 10, args.cpu_threads, args.skip_cpu)
# 8. report
report["runtime_s"] = round(common.timer() - t_start, 1)
report_path = Path(cfg["paths"]["reports"]) / "smoke_test.json"
report["report_path"] = str(report_path)
common.write_json(report, report_path)
LOG.info("wrote %s (%.1f s total)", report_path, report["runtime_s"])
print()
print(markdown_summary(report))
return 0
if __name__ == "__main__":
sys.exit(main())
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