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README.md
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The utility of this model is to be used in single-cell analysis of microscopic imaging.
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- **Developed by:** Vidit Agrawal, Juan Caicedo
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- **Funded by:** NSF, Meta AI
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- **Shared by:** [Caicedo Lab]
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- **Model type:**
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- **License:** MIT License
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### Model Sources
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<!-- Provide the basic links for the model. -->
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- **Repository:** https://github.com/CaicedoLab/CHAMMI-75
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- **Paper**
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- **Demo:** https://github.com/CaicedoLab/CHAMMI-75/tree/main/aws-tutorials
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## Uses
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We have utilized the DINO model.
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#### Preprocessing
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[More Information Needed]
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## Evaluation
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<!-- This section describes the evaluation protocols and provides the results. -->
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### Testing Data, Factors & Metrics
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#### Testing Data
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<!-- This should link to a Dataset Card if possible. -->
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[More Information Needed]
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#### Factors
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<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
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[More Information Needed]
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#### Metrics
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<!-- These are the evaluation metrics being used, ideally with a description of why. -->
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[More Information Needed]
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### Results
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[More Information Needed]
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#### Summary
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## Model Examination [optional]
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<!-- Relevant interpretability work for the model goes here -->
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[More Information Needed]
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## Environmental Impact
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<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
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- **Compute Region:** Private Infrastructure
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- **Carbon Emitted:** 324 kg CO2
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## Technical Specifications
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### Model Architecture and Objective
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The model is a ViT Small trained on 2500 Nvidia A6000 GPU hours.
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### Compute Infrastructure
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The model was trained on a multi-node system with 2 nodes, each containing 7 GPUs.
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[More Information Needed]
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#### Software
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[More Information Needed]
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## Citation
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<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
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**BibTeX:**
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[More Information Needed]
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**APA:**
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[More Information Needed]
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## Glossary [optional]
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<!--
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[More Information Needed]
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## More Information [optional]
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[More Information Needed]
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## Model Card Authors
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Vidit Agrawal, John Peters,
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## Model Card Contact
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vagrawal22@wisc.edu, juan.caicedo@wisc.edu
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The utility of this model is to be used in single-cell analysis of microscopic imaging.
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- **Developed by:** Vidit Agrawal, John Peters, Juan Caicedo
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- **Shared by:** [Caicedo Lab]
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- **Model type:** Vision Transformer Small
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- **License:** MIT License
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### Model Sources
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<!-- Provide the basic links for the model. -->
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- **Repository:** https://github.com/CaicedoLab/CHAMMI-75
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<!-- - **Paper** -->
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- **Demo:** https://github.com/CaicedoLab/CHAMMI-75/tree/main/aws-tutorials
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## Uses
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We have utilized the DINO model.
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#### Preprocessing
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[More Information Needed]
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## Evaluation
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<!-- This section describes the evaluation protocols and provides the results. -->
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specify all 6 benchmarks, and point to them. Point to the paper?
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#### Summary
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## Environmental Impact
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<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
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- **Compute Region:** Private Infrastructure
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- **Carbon Emitted:** 324 kg CO2
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## Technical Specifications
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The model is a ViT Small trained on 2500 Nvidia A6000 GPU hours. The model was trained on a multi-node system with 2 nodes, each containing 7 GPUs.
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<!-- ## Citation -->
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<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
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<!-- **BibTeX:** -->
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<!-- **APA:** -->
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## Model Card Authors
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Vidit Agrawal, John Peters, Juan C. Caicedo
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## Model Card Contact
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vagrawal22@wisc.edu, jgpeters3@wisc.edu, juan.caicedo@wisc.edu
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