# Model settings: where is the model you wish to use for mutation discovery? FUSON_PLM_CKPT = "FusOn-pLM" #### Fill in this sectinon if you have one input # Sequence settings: need full sequence of fusion oncoprotein, and the bounds of region of interest FULL_FUSION_SEQUENCE = "" FUSION_NAME = "fusion_example" START_RESIDUE_INDEX = 1 END_RESIDUE_INDEX = 100 N = 3 # number of mutations to predict per amio acid #### Fill in this section if you have multiple input PATH_TO_INPUT_FILE = "processed_data/domain_conservation_fusions_inputfile.csv" # if you don't have an input file and want to do one sequence, set this variable to None # GPU Settings: which GPUs should be available to run this discovery? CUDA_VISIBLE_DEVICES = "0"