PIVOT / experiments /results /gears_norman.json
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pivot: code + trained checkpoints (norman, replogle k562)
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{
"n_test_perts": 45,
"test_perts": [
"ARID1A+ctrl",
"ARRDC3+ctrl",
"ATL1+ctrl",
"BAK1+ctrl",
"BCL2L11+BAK1",
"BCL2L11+TGFBR2",
"BCL2L11+ctrl",
"BPGM+ZBTB1",
"C3orf72+FOXL2",
"CBFA2T3+ctrl",
"CBL+TGFBR2",
"CBL+ctrl",
"CEBPB+OSR2",
"CEBPE+PTPN12",
"CKS1B+ctrl",
"CNNM4+ctrl",
"DUSP9+IGDCC3",
"DUSP9+ctrl",
"EGR1+ctrl",
"ETS2+CEBPE",
"FOXA1+FOXF1",
"FOXF1+HOXB9",
"FOXF1+ctrl",
"GLB1L2+ctrl",
"HOXC13+ctrl",
"IGDCC3+PRTG",
"IRF1+SET",
"KLF1+CEBPA",
"KLF1+FOXA1",
"KMT2A+ctrl",
"MAP2K3+IKZF3",
"MAP2K3+MAP2K6",
"MAPK1+ctrl",
"NCL+ctrl",
"PLK4+STIL",
"PTPN12+UBASH3A",
"RREB1+ctrl",
"SNAI1+DLX2",
"TBX3+TBX2",
"TGFBR2+ETS2",
"TGFBR2+ctrl",
"TSC22D1+ctrl",
"UBASH3B+PTPN12",
"ZBTB10+DLX2",
"ZNF318+ctrl"
],
"metrics": {
"mse": 0.003074304576471655,
"mse_de": 0.10127744511701167,
"pearson": 0.9916384220123291,
"pearson_de": 0.8981071008576287
}
}