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ynuozhang commited on
Commit
8dfd7a6
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1 Parent(s): 58f63ee

update best model weights, mapie calibration; rename smiles folders to peptideclm/chemberta

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  1. training_classifiers/binding_affinity/chemberta_smiles_pooled/mapie_calibration.joblib +2 -2
  2. training_classifiers/binding_affinity/chemberta_smiles_unpooled/mapie_calibration.joblib +2 -2
  3. training_classifiers/binding_affinity/peptideclm_smiles_pooled/mapie_calibration.joblib +2 -2
  4. training_classifiers/binding_affinity/peptideclm_smiles_unpooled/mapie_calibration.joblib +2 -2
  5. training_classifiers/binding_affinity/wt_wt_pooled/mapie_calibration.joblib +2 -2
  6. training_classifiers/binding_affinity/wt_wt_unpooled/mapie_calibration.joblib +2 -2
  7. training_classifiers/half_life/{transformer_smiles → transformer_peptideclm}/mapie_calibration.joblib +0 -0
  8. training_classifiers/half_life/transformer_wt_log/mapie_calibration.joblib +2 -2
  9. training_classifiers/half_life/transformer_wt_raw/mapie_calibration.joblib +2 -2
  10. training_classifiers/half_life/xgb_chemberta/best_model.json +0 -0
  11. training_classifiers/half_life/{xgb_smiles → xgb_peptideclm}/best_model.json +0 -0
  12. training_classifiers/half_life/{xgb_smiles → xgb_peptideclm}/mapie_calibration.joblib +0 -0
  13. training_classifiers/half_life/xgb_wt_log/best_model.json +0 -0
  14. training_classifiers/half_life/xgb_wt_log/mapie_calibration.joblib +2 -2
  15. training_classifiers/half_life/xgb_wt_raw/best_model.json +0 -0
  16. training_classifiers/half_life/xgb_wt_raw/mapie_calibration.joblib +2 -2
  17. training_classifiers/hemolysis/cnn_chemberta/mapie_calibration.joblib +2 -2
  18. training_classifiers/hemolysis/{cnn_smiles → cnn_peptideclm}/mapie_calibration.joblib +2 -2
  19. training_classifiers/hemolysis/cnn_wt/mapie_calibration.joblib +2 -2
  20. training_classifiers/hemolysis/enet_gpu_chemberta/best_model_cuml_enet.joblib +0 -0
  21. training_classifiers/hemolysis/enet_gpu_chemberta/mapie_calibration.joblib +2 -2
  22. training_classifiers/hemolysis/{enet_gpu_smiles → enet_gpu_peptideclm}/best_model_cuml_enet.joblib +0 -0
  23. training_classifiers/hemolysis/{enet_gpu_smiles → enet_gpu_peptideclm}/mapie_calibration.joblib +2 -2
  24. training_classifiers/hemolysis/enet_gpu_wt/best_model_cuml_enet.joblib +0 -0
  25. training_classifiers/hemolysis/enet_gpu_wt/mapie_calibration.joblib +2 -2
  26. training_classifiers/hemolysis/mlp_chemberta/mapie_calibration.joblib +2 -2
  27. training_classifiers/hemolysis/{mlp_smiles → mlp_peptideclm}/mapie_calibration.joblib +2 -2
  28. training_classifiers/hemolysis/mlp_wt/mapie_calibration.joblib +2 -2
  29. training_classifiers/hemolysis/svm_gpu_chemberta/best_model_cuml_svc.joblib +0 -0
  30. training_classifiers/hemolysis/svm_gpu_chemberta/mapie_calibration.joblib +2 -2
  31. training_classifiers/hemolysis/{svm_gpu_smiles → svm_gpu_peptideclm}/best_model_cuml_svc.joblib +0 -0
  32. training_classifiers/hemolysis/{svm_gpu_smiles → svm_gpu_peptideclm}/mapie_calibration.joblib +2 -2
  33. training_classifiers/hemolysis/svm_gpu_wt/best_model_cuml_svc.joblib +0 -0
  34. training_classifiers/hemolysis/svm_gpu_wt/mapie_calibration.joblib +2 -2
  35. training_classifiers/hemolysis/transformer_chemberta/mapie_calibration.joblib +2 -2
  36. training_classifiers/hemolysis/transformer_peptideclm/mapie_calibration.joblib +3 -0
  37. training_classifiers/hemolysis/transformer_smiles/mapie_calibration.joblib +0 -3
  38. training_classifiers/hemolysis/transformer_wt/mapie_calibration.joblib +2 -2
  39. training_classifiers/hemolysis/xgb_chemberta/best_model.json +0 -0
  40. training_classifiers/hemolysis/xgb_chemberta/mapie_calibration.joblib +2 -2
  41. training_classifiers/hemolysis/{xgb_smiles → xgb_peptideclm}/best_model.json +0 -0
  42. training_classifiers/hemolysis/xgb_peptideclm/mapie_calibration.joblib +3 -0
  43. training_classifiers/hemolysis/xgb_smiles/mapie_calibration.joblib +0 -3
  44. training_classifiers/hemolysis/xgb_wt/best_model.json +0 -0
  45. training_classifiers/hemolysis/xgb_wt/mapie_calibration.joblib +2 -2
  46. training_classifiers/nf/cnn_chemberta/mapie_calibration.joblib +2 -2
  47. training_classifiers/nf/cnn_peptideclm/mapie_calibration.joblib +3 -0
  48. training_classifiers/nf/cnn_smiles/mapie_calibration.joblib +0 -3
  49. training_classifiers/nf/cnn_wt/mapie_calibration.joblib +2 -2
  50. training_classifiers/nf/enet_gpu_chemberta/best_model_cuml_enet.joblib +0 -0
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