Update README.md

README.md

@@ -52,67 +52,8 @@ with torch.no_grad():
         {
           "role": "user",
           "content": (
-              "For a patient who presents with Intellectual disability, movement disorder, "
-              "memory impairment, abnormal posture, falls, dysarthria, leukodystrophy, "
-              "developmental regression, muscle weakness, elevated liver transaminases, "
-              "atopic dermatitis, rash, pruritus.\n"
-              "We can find some patients with similar phenotypes, such as:\n"
-              "A patient presents with Seizure, Global developmental delay, Intellectual "
-              "disability, Gait disturbance, Hyperornithinemia, Childlike behavior, "
-              "Clumsiness, Spasticity, Myoclonus, Ataxic gait, Falls, Drop attacks, "
-              "Spastic gait, Ataxic gait, Depressive episode, Suicidal behavior, "
-              "Asthenia, Fatigue, Dysarthria, Urinary incontinence, Fecal incontinence, "
-              "Intervertebral disc degeneration, Syringomyelia, Cerebral atrophy, "
-              "Leukoencephalopathy, Pons hyperdensity, Myelopathy, Peripheral neuropathy, "
-              "Wheelchair bound, Proximal muscle weakness, Hypotonia, Hyperreflexia, "
-              "Babinski sign, Memory impairment, Cognitive decline, Dysphagia, "
-              "Impaired self-care. This patient has a mutation in "
-              "<|PhenoGemini-Special-Token-Entrez-ID-10166|>.\n"
-              "A patient presents with Irritability, Seizure, Developmental regression, "
-              "Failure to thrive, Food aversion, Tremor, Head nodding, Global developmental "
-              "delay, Hepatomegaly, Aggressive behavior, Attention deficit hyperactivity "
-              "disorder, Intellectual disability, Spastic paraplegia, Hyperreflexia, "
-              "Clonus, Babinski sign, Impaired verbal comprehension, Short-term memory "
-              "impairment, Gait disturbance, Frequent falls, Inability to walk, Dystonia, "
-              "Impaired arithmetic ability, Impaired performance on psychometric tests, "
-              "Postural instability, Muscle weakness, Gait ataxia, Circumduction gait, "
-              "Shuffling gait, Muscle wasting, Spasticity, Proximal muscle weakness. "
-              "This patient has a mutation in "
-              "<|PhenoGemini-Special-Token-Entrez-ID-10166|>.\n"
-              "A patient presents with Cognitive impairment, Absent speech, Gait "
-              "disturbance, Hypotonia, Alacrima, Constipation, Tremor, Hyperkinesia, "
-              "Abnormality of the electroencephalogram, Seizure, Elevated hepatic "
-              "transaminase, Failure to thrive, Sleep disturbance, Dysphagia, Scoliosis, "
-              "Small hands, Small feet, Abnormality of the skin, Corneal opacity, "
-              "Peripheral neuropathy, Hearing impairment, Recurrent infections, "
-              "Strabismus, Abnormality of metabolism/homeostasis, Neurodevelopmental "
-              "regression, Hypospadias, Recurrent pneumonia, Airway obstruction, "
-              "Recurrent fractures, Osteopenia, Laryngomalacia, Hirschsprung disease, "
-              "Anxiety, Eosinophilic esophagitis, Microcephaly, Skin hypopigmentation, "
-              "Skin hyperpigmentation, Exocrine pancreatic insufficiency, "
-              "Abnormality of vision. This patient has a mutation in "
-              "<|PhenoGemini-Special-Token-Entrez-ID-55768|>.\n"
-              "A patient presents with Chronic kidney disease, Gout, Action tremor, "
-              "Myoclonus, Gait disturbance, Falls, Dysarthria, Distal sensory loss, "
-              "Sensorineural hearing impairment, Stuttering, Motor delay, Axial ataxia, "
-              "Dysmetria, Slow saccadic eye movements, Ptosis, Abnormality of the Romberg "
-              "sign, Dystonia, Muscle weakness, Axonal neuropathy, Impaired temperature "
-              "sensation, Cerebellar atrophy, Cortical atrophy, Impaired working memory, "
-              "Perseveration, Impaired concentration, Bradyphrenia, Glomerulonephritis, "
-              "Nephronophthisis, Cytochrome c oxidase deficiency, Ragged red muscle "
-              "fibers, Abnormality of mitochondrial morphology. This patient has a "
-              "mutation in <|PhenoGemini-Special-Token-Entrez-ID-63929|>.\n"
-              "A patient presents with Developmental delay, Hypotonia, Microcephaly, "
-              "Failure to thrive, Gastroesophageal reflux, Absence of speech, Drooling, "
-              "Abnormal ocular pursuit, Ataxia, Dysmetria, Areflexia, Limb weakness, "
-              "Abnormal involuntary movements, Axonal neuropathy, Sensorimotor "
-              "neuropathy, Unilateral hearing impairment, Abnormal visual evoked "
-              "potentials, Skeletal deformities, Muscle wasting, Gait disturbance, "
-              "Chorea, Orofacial dyskinesia, Chewing difficulty, Optic atrophy, "
-              "Increased CSF lactate, Dysarthria. This patient has a mutation in "
-              "<|PhenoGemini-Special-Token-Entrez-ID-9927|>.\n"
-              "Based on all the information above, and my own general knowledge, "
-              "this patient is likely to have a mutation in"
+            "[GET EXAMPLE PROMPT AT https://github.com/discostudy/phenogemini]"
+            "[USE `https://phenogemini.org` TO GENERATE A PROMPT OF PATIENT'S PHENOTYPES.]"
             ),
         }
     ]