| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
| |
|
|
| """ Collection of utils to be used by backbones and their components.""" |
|
|
| import enum |
| import inspect |
| from typing import Iterable, List, Optional, Tuple, Union |
|
|
|
|
| class BackboneType(enum.Enum): |
| TIMM = "timm" |
| TRANSFORMERS = "transformers" |
|
|
|
|
| def verify_out_features_out_indices( |
| out_features: Optional[Iterable[str]], out_indices: Optional[Iterable[int]], stage_names: Optional[Iterable[str]] |
| ): |
| """ |
| Verify that out_indices and out_features are valid for the given stage_names. |
| """ |
| if stage_names is None: |
| raise ValueError("Stage_names must be set for transformers backbones") |
|
|
| if out_features is not None: |
| if not isinstance(out_features, (list,)): |
| raise ValueError(f"out_features must be a list {type(out_features)}") |
| if any(feat not in stage_names for feat in out_features): |
| raise ValueError(f"out_features must be a subset of stage_names: {stage_names} got {out_features}") |
|
|
| if out_indices is not None: |
| if not isinstance(out_indices, (list, tuple)): |
| raise ValueError(f"out_indices must be a list or tuple, got {type(out_indices)}") |
| if any(idx >= len(stage_names) for idx in out_indices): |
| raise ValueError(f"out_indices must be valid indices for stage_names {stage_names}, got {out_indices}") |
|
|
| if out_features is not None and out_indices is not None: |
| if len(out_features) != len(out_indices): |
| raise ValueError("out_features and out_indices should have the same length if both are set") |
| if out_features != [stage_names[idx] for idx in out_indices]: |
| raise ValueError("out_features and out_indices should correspond to the same stages if both are set") |
|
|
|
|
| def _align_output_features_output_indices( |
| out_features: Optional[List[str]], |
| out_indices: Optional[Union[List[int], Tuple[int]]], |
| stage_names: List[str], |
| ): |
| """ |
| Finds the corresponding `out_features` and `out_indices` for the given `stage_names`. |
| |
| The logic is as follows: |
| - `out_features` not set, `out_indices` set: `out_features` is set to the `out_features` corresponding to the |
| `out_indices`. |
| - `out_indices` not set, `out_features` set: `out_indices` is set to the `out_indices` corresponding to the |
| `out_features`. |
| - `out_indices` and `out_features` not set: `out_indices` and `out_features` are set to the last stage. |
| - `out_indices` and `out_features` set: input `out_indices` and `out_features` are returned. |
| |
| Args: |
| out_features (`List[str]`): The names of the features for the backbone to output. |
| out_indices (`List[int]` or `Tuple[int]`): The indices of the features for the backbone to output. |
| stage_names (`List[str]`): The names of the stages of the backbone. |
| """ |
| if out_indices is None and out_features is None: |
| out_indices = [len(stage_names) - 1] |
| out_features = [stage_names[-1]] |
| elif out_indices is None and out_features is not None: |
| out_indices = [stage_names.index(layer) for layer in out_features] |
| elif out_features is None and out_indices is not None: |
| out_features = [stage_names[idx] for idx in out_indices] |
| return out_features, out_indices |
|
|
|
|
| def get_aligned_output_features_output_indices( |
| out_features: Optional[List[str]], |
| out_indices: Optional[Union[List[int], Tuple[int]]], |
| stage_names: List[str], |
| ) -> Tuple[List[str], List[int]]: |
| """ |
| Get the `out_features` and `out_indices` so that they are aligned. |
| |
| The logic is as follows: |
| - `out_features` not set, `out_indices` set: `out_features` is set to the `out_features` corresponding to the |
| `out_indices`. |
| - `out_indices` not set, `out_features` set: `out_indices` is set to the `out_indices` corresponding to the |
| `out_features`. |
| - `out_indices` and `out_features` not set: `out_indices` and `out_features` are set to the last stage. |
| - `out_indices` and `out_features` set: they are verified to be aligned. |
| |
| Args: |
| out_features (`List[str]`): The names of the features for the backbone to output. |
| out_indices (`List[int]` or `Tuple[int]`): The indices of the features for the backbone to output. |
| stage_names (`List[str]`): The names of the stages of the backbone. |
| """ |
| |
| verify_out_features_out_indices(out_features=out_features, out_indices=out_indices, stage_names=stage_names) |
| output_features, output_indices = _align_output_features_output_indices( |
| out_features=out_features, out_indices=out_indices, stage_names=stage_names |
| ) |
| |
| verify_out_features_out_indices(out_features=output_features, out_indices=output_indices, stage_names=stage_names) |
| return output_features, output_indices |
|
|
|
|
| class BackboneMixin: |
| backbone_type: Optional[BackboneType] = None |
|
|
| def _init_timm_backbone(self, config) -> None: |
| """ |
| Initialize the backbone model from timm The backbone must already be loaded to self._backbone |
| """ |
| if getattr(self, "_backbone", None) is None: |
| raise ValueError("self._backbone must be set before calling _init_timm_backbone") |
|
|
| |
| |
| |
| self.stage_names = [stage["module"] for stage in self._backbone.feature_info.info] |
| self.num_features = [stage["num_chs"] for stage in self._backbone.feature_info.info] |
| out_indices = self._backbone.feature_info.out_indices |
| out_features = self._backbone.feature_info.module_name() |
|
|
| |
| verify_out_features_out_indices( |
| out_features=out_features, out_indices=out_indices, stage_names=self.stage_names |
| ) |
| self._out_features, self._out_indices = out_features, out_indices |
|
|
| def _init_transformers_backbone(self, config) -> None: |
| stage_names = getattr(config, "stage_names") |
| out_features = getattr(config, "out_features", None) |
| out_indices = getattr(config, "out_indices", None) |
|
|
| self.stage_names = stage_names |
| self._out_features, self._out_indices = get_aligned_output_features_output_indices( |
| out_features=out_features, out_indices=out_indices, stage_names=stage_names |
| ) |
| |
| self.num_features = None |
|
|
| def _init_backbone(self, config) -> None: |
| """ |
| Method to initialize the backbone. This method is called by the constructor of the base class after the |
| pretrained model weights have been loaded. |
| """ |
| self.config = config |
|
|
| self.use_timm_backbone = getattr(config, "use_timm_backbone", False) |
| self.backbone_type = BackboneType.TIMM if self.use_timm_backbone else BackboneType.TRANSFORMERS |
|
|
| if self.backbone_type == BackboneType.TIMM: |
| self._init_timm_backbone(config) |
| elif self.backbone_type == BackboneType.TRANSFORMERS: |
| self._init_transformers_backbone(config) |
| else: |
| raise ValueError(f"backbone_type {self.backbone_type} not supported.") |
|
|
| @property |
| def out_features(self): |
| return self._out_features |
|
|
| @out_features.setter |
| def out_features(self, out_features: List[str]): |
| """ |
| Set the out_features attribute. This will also update the out_indices attribute to match the new out_features. |
| """ |
| self._out_features, self._out_indices = get_aligned_output_features_output_indices( |
| out_features=out_features, out_indices=None, stage_names=self.stage_names |
| ) |
|
|
| @property |
| def out_indices(self): |
| return self._out_indices |
|
|
| @out_indices.setter |
| def out_indices(self, out_indices: Union[Tuple[int], List[int]]): |
| """ |
| Set the out_indices attribute. This will also update the out_features attribute to match the new out_indices. |
| """ |
| self._out_features, self._out_indices = get_aligned_output_features_output_indices( |
| out_features=None, out_indices=out_indices, stage_names=self.stage_names |
| ) |
|
|
| @property |
| def out_feature_channels(self): |
| |
| |
| return {stage: self.num_features[i] for i, stage in enumerate(self.stage_names)} |
|
|
| @property |
| def channels(self): |
| return [self.out_feature_channels[name] for name in self.out_features] |
|
|
| def forward_with_filtered_kwargs(self, *args, **kwargs): |
| signature = dict(inspect.signature(self.forward).parameters) |
| filtered_kwargs = {k: v for k, v in kwargs.items() if k in signature} |
| return self(*args, **filtered_kwargs) |
|
|
| def forward( |
| self, |
| pixel_values, |
| output_hidden_states: Optional[bool] = None, |
| output_attentions: Optional[bool] = None, |
| return_dict: Optional[bool] = None, |
| ): |
| raise NotImplementedError("This method should be implemented by the derived class.") |
|
|
| def to_dict(self): |
| """ |
| Serializes this instance to a Python dictionary. Override the default `to_dict()` from `PretrainedConfig` to |
| include the `out_features` and `out_indices` attributes. |
| """ |
| output = super().to_dict() |
| output["out_features"] = output.pop("_out_features") |
| output["out_indices"] = output.pop("_out_indices") |
| return output |
|
|
|
|
| class BackboneConfigMixin: |
| """ |
| A Mixin to support handling the `out_features` and `out_indices` attributes for the backbone configurations. |
| """ |
|
|
| @property |
| def out_features(self): |
| return self._out_features |
|
|
| @out_features.setter |
| def out_features(self, out_features: List[str]): |
| """ |
| Set the out_features attribute. This will also update the out_indices attribute to match the new out_features. |
| """ |
| self._out_features, self._out_indices = get_aligned_output_features_output_indices( |
| out_features=out_features, out_indices=None, stage_names=self.stage_names |
| ) |
|
|
| @property |
| def out_indices(self): |
| return self._out_indices |
|
|
| @out_indices.setter |
| def out_indices(self, out_indices: Union[Tuple[int], List[int]]): |
| """ |
| Set the out_indices attribute. This will also update the out_features attribute to match the new out_indices. |
| """ |
| self._out_features, self._out_indices = get_aligned_output_features_output_indices( |
| out_features=None, out_indices=out_indices, stage_names=self.stage_names |
| ) |
|
|
| def to_dict(self): |
| """ |
| Serializes this instance to a Python dictionary. Override the default `to_dict()` from `PretrainedConfig` to |
| include the `out_features` and `out_indices` attributes. |
| """ |
| output = super().to_dict() |
| output["out_features"] = output.pop("_out_features") |
| output["out_indices"] = output.pop("_out_indices") |
| return output |
|
|