| { |
| "architectures": ["T5EncoderModel"], |
| "model_type": "t5", |
| "framework": "onnx", |
| "onnx": { |
| "opset_version": 14, |
| "providers": [ |
| "CoreMLExecutionProvider", |
| "CUDAExecutionProvider", |
| "CPUExecutionProvider" |
| ], |
| "external_data": true, |
| "optimization_level": "all", |
| "fp16": true |
| }, |
| "d_ff": 2816, |
| "d_kv": 64, |
| "d_model": 1024, |
| "decoder_start_token_id": 0, |
| "dropout_rate": 0.1, |
| "eos_token_id": 1, |
| "feed_forward_proj": "gated-gelu", |
| "initializer_factor": 1.0, |
| "is_encoder_decoder": false, |
| "layer_norm_epsilon": 1e-06, |
| "num_decoder_layers": 24, |
| "num_heads": 16, |
| "num_layers": 24, |
| "pad_token_id": 0, |
| "relative_attention_num_buckets": 32, |
| "tie_word_embeddings": false, |
| "torch_dtype": "float16", |
| "transformers_version": "4.21.0", |
| "use_cache": false, |
| "vocab_size": 32128, |
| "task_specific_params": { |
| "protein_embedding": { |
| "early_stopping": true, |
| "length_penalty": 2.0, |
| "max_length": 1024, |
| "min_length": 1, |
| "no_repeat_ngram_size": 3, |
| "num_beams": 4, |
| "prefix": "" |
| } |
| }, |
| "protein_config": { |
| "amino_acid_vocab": ["A", "C", "D", "E", "F", "G", "H", "I", "K", "L", "M", "N", "P", "Q", "R", "S", "T", "V", "W", "Y", "X"], |
| "rare_amino_acids": ["U", "Z", "O", "B"], |
| "replacement_token": "X", |
| "sequence_separator": " ", |
| "preprocessing": { |
| "rare_aa_replacement": true, |
| "space_separation": true, |
| "uppercase_only": true |
| } |
| }, |
| "conversion_info": { |
| "source_model": "Rostlab/prot_t5_xl_half_uniref50-enc", |
| "conversion_date": "2025-07-27", |
| "conversion_tool": "torch.onnx.export", |
| "validation_metrics": { |
| "avg_cosine_similarity": 1.000244, |
| "max_absolute_difference": 0.001953, |
| "test_cases_passed": 4 |
| } |
| } |
| } |
