| """
|
| NumPy
|
| =====
|
|
|
| Provides
|
| 1. An array object of arbitrary homogeneous items
|
| 2. Fast mathematical operations over arrays
|
| 3. Linear Algebra, Fourier Transforms, Random Number Generation
|
|
|
| How to use the documentation
|
| ----------------------------
|
| Documentation is available in two forms: docstrings provided
|
| with the code, and a loose standing reference guide, available from
|
| `the NumPy homepage <https://numpy.org>`_.
|
|
|
| We recommend exploring the docstrings using
|
| `IPython <https://ipython.org>`_, an advanced Python shell with
|
| TAB-completion and introspection capabilities. See below for further
|
| instructions.
|
|
|
| The docstring examples assume that `numpy` has been imported as ``np``::
|
|
|
| >>> import numpy as np
|
|
|
| Code snippets are indicated by three greater-than signs::
|
|
|
| >>> x = 42
|
| >>> x = x + 1
|
|
|
| Use the built-in ``help`` function to view a function's docstring::
|
|
|
| >>> help(np.sort)
|
| ... # doctest: +SKIP
|
|
|
| For some objects, ``np.info(obj)`` may provide additional help. This is
|
| particularly true if you see the line "Help on ufunc object:" at the top
|
| of the help() page. Ufuncs are implemented in C, not Python, for speed.
|
| The native Python help() does not know how to view their help, but our
|
| np.info() function does.
|
|
|
| Available subpackages
|
| ---------------------
|
| lib
|
| Basic functions used by several sub-packages.
|
| random
|
| Core Random Tools
|
| linalg
|
| Core Linear Algebra Tools
|
| fft
|
| Core FFT routines
|
| polynomial
|
| Polynomial tools
|
| testing
|
| NumPy testing tools
|
| distutils
|
| Enhancements to distutils with support for
|
| Fortran compilers support and more (for Python <= 3.11)
|
|
|
| Utilities
|
| ---------
|
| test
|
| Run numpy unittests
|
| show_config
|
| Show numpy build configuration
|
| __version__
|
| NumPy version string
|
|
|
| Viewing documentation using IPython
|
| -----------------------------------
|
|
|
| Start IPython and import `numpy` usually under the alias ``np``: `import
|
| numpy as np`. Then, directly past or use the ``%cpaste`` magic to paste
|
| examples into the shell. To see which functions are available in `numpy`,
|
| type ``np.<TAB>`` (where ``<TAB>`` refers to the TAB key), or use
|
| ``np.*cos*?<ENTER>`` (where ``<ENTER>`` refers to the ENTER key) to narrow
|
| down the list. To view the docstring for a function, use
|
| ``np.cos?<ENTER>`` (to view the docstring) and ``np.cos??<ENTER>`` (to view
|
| the source code).
|
|
|
| Copies vs. in-place operation
|
| -----------------------------
|
| Most of the functions in `numpy` return a copy of the array argument
|
| (e.g., `np.sort`). In-place versions of these functions are often
|
| available as array methods, i.e. ``x = np.array([1,2,3]); x.sort()``.
|
| Exceptions to this rule are documented.
|
|
|
| """
|
|
|
|
|
|
|
| def _delvewheel_patch_1_10_0():
|
| import os
|
| if os.path.isdir(libs_dir := os.path.abspath(os.path.join(os.path.dirname(__file__), os.pardir, 'numpy.libs'))):
|
| os.add_dll_directory(libs_dir)
|
|
|
|
|
| _delvewheel_patch_1_10_0()
|
| del _delvewheel_patch_1_10_0
|
|
|
|
|
| import os
|
| import sys
|
| import warnings
|
|
|
| from ._globals import _NoValue, _CopyMode
|
| from ._expired_attrs_2_0 import __expired_attributes__
|
|
|
|
|
|
|
| from . import version
|
| from .version import __version__
|
|
|
|
|
|
|
| try:
|
| __NUMPY_SETUP__
|
| except NameError:
|
| __NUMPY_SETUP__ = False
|
|
|
| if __NUMPY_SETUP__:
|
| sys.stderr.write('Running from numpy source directory.\n')
|
| else:
|
|
|
| from . import _distributor_init
|
|
|
| try:
|
| from numpy.__config__ import show_config
|
| except ImportError as e:
|
| msg = """Error importing numpy: you should not try to import numpy from
|
| its source directory; please exit the numpy source tree, and relaunch
|
| your python interpreter from there."""
|
| raise ImportError(msg) from e
|
|
|
| from . import _core
|
| from ._core import (
|
| False_, ScalarType, True_,
|
| abs, absolute, acos, acosh, add, all, allclose,
|
| amax, amin, any, arange, arccos, arccosh, arcsin, arcsinh,
|
| arctan, arctan2, arctanh, argmax, argmin, argpartition, argsort,
|
| argwhere, around, array, array2string, array_equal, array_equiv,
|
| array_repr, array_str, asanyarray, asarray, ascontiguousarray,
|
| asfortranarray, asin, asinh, atan, atanh, atan2, astype, atleast_1d,
|
| atleast_2d, atleast_3d, base_repr, binary_repr, bitwise_and,
|
| bitwise_count, bitwise_invert, bitwise_left_shift, bitwise_not,
|
| bitwise_or, bitwise_right_shift, bitwise_xor, block, bool, bool_,
|
| broadcast, busday_count, busday_offset, busdaycalendar, byte, bytes_,
|
| can_cast, cbrt, cdouble, ceil, character, choose, clip, clongdouble,
|
| complex128, complex64, complexfloating, compress, concat, concatenate,
|
| conj, conjugate, convolve, copysign, copyto, correlate, cos, cosh,
|
| count_nonzero, cross, csingle, cumprod, cumsum, cumulative_prod,
|
| cumulative_sum, datetime64, datetime_as_string, datetime_data,
|
| deg2rad, degrees, diagonal, divide, divmod, dot, double, dtype, e,
|
| einsum, einsum_path, empty, empty_like, equal, errstate, euler_gamma,
|
| exp, exp2, expm1, fabs, finfo, flatiter, flatnonzero, flexible,
|
| float16, float32, float64, float_power, floating, floor, floor_divide,
|
| fmax, fmin, fmod, format_float_positional, format_float_scientific,
|
| frexp, from_dlpack, frombuffer, fromfile, fromfunction, fromiter,
|
| frompyfunc, fromstring, full, full_like, gcd, generic, geomspace,
|
| get_printoptions, getbufsize, geterr, geterrcall, greater,
|
| greater_equal, half, heaviside, hstack, hypot, identity, iinfo,
|
| indices, inexact, inf, inner, int16, int32, int64, int8, int_, intc,
|
| integer, intp, invert, is_busday, isclose, isdtype, isfinite,
|
| isfortran, isinf, isnan, isnat, isscalar, issubdtype, lcm, ldexp,
|
| left_shift, less, less_equal, lexsort, linspace, little_endian, log,
|
| log10, log1p, log2, logaddexp, logaddexp2, logical_and, logical_not,
|
| logical_or, logical_xor, logspace, long, longdouble, longlong, matmul,
|
| matvec, matrix_transpose, max, maximum, may_share_memory, mean, memmap,
|
| min, min_scalar_type, minimum, mod, modf, moveaxis, multiply, nan,
|
| ndarray, ndim, nditer, negative, nested_iters, newaxis, nextafter,
|
| nonzero, not_equal, number, object_, ones, ones_like, outer, partition,
|
| permute_dims, pi, positive, pow, power, printoptions, prod,
|
| promote_types, ptp, put, putmask, rad2deg, radians, ravel, recarray,
|
| reciprocal, record, remainder, repeat, require, reshape, resize,
|
| result_type, right_shift, rint, roll, rollaxis, round, sctypeDict,
|
| searchsorted, set_printoptions, setbufsize, seterr, seterrcall, shape,
|
| shares_memory, short, sign, signbit, signedinteger, sin, single, sinh,
|
| size, sort, spacing, sqrt, square, squeeze, stack, std,
|
| str_, subtract, sum, swapaxes, take, tan, tanh, tensordot,
|
| timedelta64, trace, transpose, true_divide, trunc, typecodes, ubyte,
|
| ufunc, uint, uint16, uint32, uint64, uint8, uintc, uintp, ulong,
|
| ulonglong, unsignedinteger, unstack, ushort, var, vdot, vecdot,
|
| vecmat, void, vstack, where, zeros, zeros_like
|
| )
|
|
|
|
|
|
|
| for ta in ["float96", "float128", "complex192", "complex256"]:
|
| try:
|
| globals()[ta] = getattr(_core, ta)
|
| except AttributeError:
|
| pass
|
| del ta
|
|
|
| from . import lib
|
| from .lib import scimath as emath
|
| from .lib._histograms_impl import (
|
| histogram, histogram_bin_edges, histogramdd
|
| )
|
| from .lib._nanfunctions_impl import (
|
| nanargmax, nanargmin, nancumprod, nancumsum, nanmax, nanmean,
|
| nanmedian, nanmin, nanpercentile, nanprod, nanquantile, nanstd,
|
| nansum, nanvar
|
| )
|
| from .lib._function_base_impl import (
|
| select, piecewise, trim_zeros, copy, iterable, percentile, diff,
|
| gradient, angle, unwrap, sort_complex, flip, rot90, extract, place,
|
| vectorize, asarray_chkfinite, average, bincount, digitize, cov,
|
| corrcoef, median, sinc, hamming, hanning, bartlett, blackman,
|
| kaiser, trapezoid, trapz, i0, meshgrid, delete, insert, append,
|
| interp, quantile
|
| )
|
| from .lib._twodim_base_impl import (
|
| diag, diagflat, eye, fliplr, flipud, tri, triu, tril, vander,
|
| histogram2d, mask_indices, tril_indices, tril_indices_from,
|
| triu_indices, triu_indices_from
|
| )
|
| from .lib._shape_base_impl import (
|
| apply_over_axes, apply_along_axis, array_split, column_stack, dsplit,
|
| dstack, expand_dims, hsplit, kron, put_along_axis, row_stack, split,
|
| take_along_axis, tile, vsplit
|
| )
|
| from .lib._type_check_impl import (
|
| iscomplexobj, isrealobj, imag, iscomplex, isreal, nan_to_num, real,
|
| real_if_close, typename, mintypecode, common_type
|
| )
|
| from .lib._arraysetops_impl import (
|
| ediff1d, in1d, intersect1d, isin, setdiff1d, setxor1d, union1d,
|
| unique, unique_all, unique_counts, unique_inverse, unique_values
|
| )
|
| from .lib._ufunclike_impl import fix, isneginf, isposinf
|
| from .lib._arraypad_impl import pad
|
| from .lib._utils_impl import (
|
| show_runtime, get_include, info
|
| )
|
| from .lib._stride_tricks_impl import (
|
| broadcast_arrays, broadcast_shapes, broadcast_to
|
| )
|
| from .lib._polynomial_impl import (
|
| poly, polyint, polyder, polyadd, polysub, polymul, polydiv, polyval,
|
| polyfit, poly1d, roots
|
| )
|
| from .lib._npyio_impl import (
|
| savetxt, loadtxt, genfromtxt, load, save, savez, packbits,
|
| savez_compressed, unpackbits, fromregex
|
| )
|
| from .lib._index_tricks_impl import (
|
| diag_indices_from, diag_indices, fill_diagonal, ndindex, ndenumerate,
|
| ix_, c_, r_, s_, ogrid, mgrid, unravel_index, ravel_multi_index,
|
| index_exp
|
| )
|
|
|
| from . import matrixlib as _mat
|
| from .matrixlib import (
|
| asmatrix, bmat, matrix
|
| )
|
|
|
|
|
|
|
|
|
|
|
| __numpy_submodules__ = {
|
| "linalg", "fft", "dtypes", "random", "polynomial", "ma",
|
| "exceptions", "lib", "ctypeslib", "testing", "typing",
|
| "f2py", "test", "rec", "char", "core", "strings",
|
| }
|
|
|
|
|
| _msg = (
|
| "module 'numpy' has no attribute '{n}'.\n"
|
| "`np.{n}` was a deprecated alias for the builtin `{n}`. "
|
| "To avoid this error in existing code, use `{n}` by itself. "
|
| "Doing this will not modify any behavior and is safe. {extended_msg}\n"
|
| "The aliases was originally deprecated in NumPy 1.20; for more "
|
| "details and guidance see the original release note at:\n"
|
| " https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations")
|
|
|
| _specific_msg = (
|
| "If you specifically wanted the numpy scalar type, use `np.{}` here.")
|
|
|
| _int_extended_msg = (
|
| "When replacing `np.{}`, you may wish to use e.g. `np.int64` "
|
| "or `np.int32` to specify the precision. If you wish to review "
|
| "your current use, check the release note link for "
|
| "additional information.")
|
|
|
| _type_info = [
|
| ("object", ""),
|
| ("float", _specific_msg.format("float64")),
|
| ("complex", _specific_msg.format("complex128")),
|
| ("str", _specific_msg.format("str_")),
|
| ("int", _int_extended_msg.format("int"))]
|
|
|
| __former_attrs__ = {
|
| n: _msg.format(n=n, extended_msg=extended_msg)
|
| for n, extended_msg in _type_info
|
| }
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| __future_scalars__ = {"str", "bytes", "object"}
|
|
|
| __array_api_version__ = "2023.12"
|
|
|
| from ._array_api_info import __array_namespace_info__
|
|
|
|
|
| _core.getlimits._register_known_types()
|
|
|
| __all__ = list(
|
| __numpy_submodules__ |
|
| set(_core.__all__) |
|
| set(_mat.__all__) |
|
| set(lib._histograms_impl.__all__) |
|
| set(lib._nanfunctions_impl.__all__) |
|
| set(lib._function_base_impl.__all__) |
|
| set(lib._twodim_base_impl.__all__) |
|
| set(lib._shape_base_impl.__all__) |
|
| set(lib._type_check_impl.__all__) |
|
| set(lib._arraysetops_impl.__all__) |
|
| set(lib._ufunclike_impl.__all__) |
|
| set(lib._arraypad_impl.__all__) |
|
| set(lib._utils_impl.__all__) |
|
| set(lib._stride_tricks_impl.__all__) |
|
| set(lib._polynomial_impl.__all__) |
|
| set(lib._npyio_impl.__all__) |
|
| set(lib._index_tricks_impl.__all__) |
|
| {"emath", "show_config", "__version__", "__array_namespace_info__"}
|
| )
|
|
|
|
|
| warnings.filterwarnings("ignore", message="numpy.dtype size changed")
|
| warnings.filterwarnings("ignore", message="numpy.ufunc size changed")
|
| warnings.filterwarnings("ignore", message="numpy.ndarray size changed")
|
|
|
| def __getattr__(attr):
|
|
|
| import warnings
|
|
|
| if attr == "linalg":
|
| import numpy.linalg as linalg
|
| return linalg
|
| elif attr == "fft":
|
| import numpy.fft as fft
|
| return fft
|
| elif attr == "dtypes":
|
| import numpy.dtypes as dtypes
|
| return dtypes
|
| elif attr == "random":
|
| import numpy.random as random
|
| return random
|
| elif attr == "polynomial":
|
| import numpy.polynomial as polynomial
|
| return polynomial
|
| elif attr == "ma":
|
| import numpy.ma as ma
|
| return ma
|
| elif attr == "ctypeslib":
|
| import numpy.ctypeslib as ctypeslib
|
| return ctypeslib
|
| elif attr == "exceptions":
|
| import numpy.exceptions as exceptions
|
| return exceptions
|
| elif attr == "testing":
|
| import numpy.testing as testing
|
| return testing
|
| elif attr == "matlib":
|
| import numpy.matlib as matlib
|
| return matlib
|
| elif attr == "f2py":
|
| import numpy.f2py as f2py
|
| return f2py
|
| elif attr == "typing":
|
| import numpy.typing as typing
|
| return typing
|
| elif attr == "rec":
|
| import numpy.rec as rec
|
| return rec
|
| elif attr == "char":
|
| import numpy.char as char
|
| return char
|
| elif attr == "array_api":
|
| raise AttributeError("`numpy.array_api` is not available from "
|
| "numpy 2.0 onwards", name=None)
|
| elif attr == "core":
|
| import numpy.core as core
|
| return core
|
| elif attr == "strings":
|
| import numpy.strings as strings
|
| return strings
|
| elif attr == "distutils":
|
| if 'distutils' in __numpy_submodules__:
|
| import numpy.distutils as distutils
|
| return distutils
|
| else:
|
| raise AttributeError("`numpy.distutils` is not available from "
|
| "Python 3.12 onwards", name=None)
|
|
|
| if attr in __future_scalars__:
|
|
|
|
|
| warnings.warn(
|
| f"In the future `np.{attr}` will be defined as the "
|
| "corresponding NumPy scalar.", FutureWarning, stacklevel=2)
|
|
|
| if attr in __former_attrs__:
|
| raise AttributeError(__former_attrs__[attr], name=None)
|
|
|
| if attr in __expired_attributes__:
|
| raise AttributeError(
|
| f"`np.{attr}` was removed in the NumPy 2.0 release. "
|
| f"{__expired_attributes__[attr]}",
|
| name=None
|
| )
|
|
|
| if attr == "chararray":
|
| warnings.warn(
|
| "`np.chararray` is deprecated and will be removed from "
|
| "the main namespace in the future. Use an array with a string "
|
| "or bytes dtype instead.", DeprecationWarning, stacklevel=2)
|
| import numpy.char as char
|
| return char.chararray
|
|
|
| raise AttributeError("module {!r} has no attribute "
|
| "{!r}".format(__name__, attr))
|
|
|
| def __dir__():
|
| public_symbols = (
|
| globals().keys() | __numpy_submodules__
|
| )
|
| public_symbols -= {
|
| "matrixlib", "matlib", "tests", "conftest", "version",
|
| "compat", "distutils", "array_api"
|
| }
|
| return list(public_symbols)
|
|
|
|
|
| from numpy._pytesttester import PytestTester
|
| test = PytestTester(__name__)
|
| del PytestTester
|
|
|
| def _sanity_check():
|
| """
|
| Quick sanity checks for common bugs caused by environment.
|
| There are some cases e.g. with wrong BLAS ABI that cause wrong
|
| results under specific runtime conditions that are not necessarily
|
| achieved during test suite runs, and it is useful to catch those early.
|
|
|
| See https://github.com/numpy/numpy/issues/8577 and other
|
| similar bug reports.
|
|
|
| """
|
| try:
|
| x = ones(2, dtype=float32)
|
| if not abs(x.dot(x) - float32(2.0)) < 1e-5:
|
| raise AssertionError
|
| except AssertionError:
|
| msg = ("The current Numpy installation ({!r}) fails to "
|
| "pass simple sanity checks. This can be caused for example "
|
| "by incorrect BLAS library being linked in, or by mixing "
|
| "package managers (pip, conda, apt, ...). Search closed "
|
| "numpy issues for similar problems.")
|
| raise RuntimeError(msg.format(__file__)) from None
|
|
|
| _sanity_check()
|
| del _sanity_check
|
|
|
| def _mac_os_check():
|
| """
|
| Quick Sanity check for Mac OS look for accelerate build bugs.
|
| Testing numpy polyfit calls init_dgelsd(LAPACK)
|
| """
|
| try:
|
| c = array([3., 2., 1.])
|
| x = linspace(0, 2, 5)
|
| y = polyval(c, x)
|
| _ = polyfit(x, y, 2, cov=True)
|
| except ValueError:
|
| pass
|
|
|
| if sys.platform == "darwin":
|
| from . import exceptions
|
| with warnings.catch_warnings(record=True) as w:
|
| _mac_os_check()
|
|
|
| if len(w) > 0:
|
| for _wn in w:
|
| if _wn.category is exceptions.RankWarning:
|
|
|
| error_message = (
|
| f"{_wn.category.__name__}: {_wn.message}"
|
| )
|
| msg = (
|
| "Polyfit sanity test emitted a warning, most likely due "
|
| "to using a buggy Accelerate backend."
|
| "\nIf you compiled yourself, more information is available at:"
|
| "\nhttps://numpy.org/devdocs/building/index.html"
|
| "\nOtherwise report this to the vendor "
|
| "that provided NumPy.\n\n{}\n".format(error_message))
|
| raise RuntimeError(msg)
|
| del _wn
|
| del w
|
| del _mac_os_check
|
|
|
| def hugepage_setup():
|
| """
|
| We usually use madvise hugepages support, but on some old kernels it
|
| is slow and thus better avoided. Specifically kernel version 4.6
|
| had a bug fix which probably fixed this:
|
| https://github.com/torvalds/linux/commit/7cf91a98e607c2f935dbcc177d70011e95b8faff
|
| """
|
| use_hugepage = os.environ.get("NUMPY_MADVISE_HUGEPAGE", None)
|
| if sys.platform == "linux" and use_hugepage is None:
|
|
|
|
|
|
|
|
|
|
|
| try:
|
| use_hugepage = 1
|
| kernel_version = os.uname().release.split(".")[:2]
|
| kernel_version = tuple(int(v) for v in kernel_version)
|
| if kernel_version < (4, 6):
|
| use_hugepage = 0
|
| except ValueError:
|
| use_hugepage = 0
|
| elif use_hugepage is None:
|
|
|
| use_hugepage = 1
|
| else:
|
| use_hugepage = int(use_hugepage)
|
| return use_hugepage
|
|
|
|
|
| _core.multiarray._set_madvise_hugepage(hugepage_setup())
|
| del hugepage_setup
|
|
|
|
|
|
|
|
|
| _core.multiarray._multiarray_umath._reload_guard()
|
|
|
|
|
| if (os.environ.get("NPY_PROMOTION_STATE", "weak") != "weak"):
|
| warnings.warn(
|
| "NPY_PROMOTION_STATE was a temporary feature for NumPy 2.0 "
|
| "transition and is ignored after NumPy 2.2.",
|
| UserWarning, stacklevel=2)
|
|
|
|
|
| def _pyinstaller_hooks_dir():
|
| from pathlib import Path
|
| return [str(Path(__file__).with_name("_pyinstaller").resolve())]
|
|
|
|
|
|
|
| del os, sys, warnings |