Upload 24 files
Browse files- label_encoder.pkl +3 -0
- logs/events.out.tfevents.1739705623.697d7dc81256.424.0 +3 -0
- patient_model/config.json +70 -0
- patient_model/model.safetensors +3 -0
- patient_model/special_tokens_map.json +7 -0
- patient_model/tokenizer_config.json +59 -0
- patient_model/training_args.bin +3 -0
- patient_model/vocab.txt +0 -0
- wandb/debug-internal.log +59 -0
- wandb/debug.log +105 -0
- wandb/latest-run/files/output.log +179 -0
- wandb/latest-run/files/requirements.txt +615 -0
- wandb/latest-run/files/wandb-metadata.json +37 -0
- wandb/latest-run/logs/debug-core.log +6 -0
- wandb/latest-run/logs/debug-internal.log +59 -0
- wandb/latest-run/logs/debug.log +105 -0
- wandb/latest-run/run-ypm5ne5j.wandb +0 -0
- wandb/run-20250216_113712-ypm5ne5j/files/output.log +184 -0
- wandb/run-20250216_113712-ypm5ne5j/files/requirements.txt +615 -0
- wandb/run-20250216_113712-ypm5ne5j/files/wandb-metadata.json +37 -0
- wandb/run-20250216_113712-ypm5ne5j/logs/debug-core.log +6 -0
- wandb/run-20250216_113712-ypm5ne5j/logs/debug-internal.log +59 -0
- wandb/run-20250216_113712-ypm5ne5j/logs/debug.log +105 -0
- wandb/run-20250216_113712-ypm5ne5j/run-ypm5ne5j.wandb +0 -0
label_encoder.pkl
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version https://git-lfs.github.com/spec/v1
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oid sha256:799f2e7fbce5425980bcd60b99cd93b4577bd938b4f2a9e8c77490c2ac1388fb
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size 696
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logs/events.out.tfevents.1739705623.697d7dc81256.424.0
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version https://git-lfs.github.com/spec/v1
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oid sha256:2ac074d7b98937ce4fb18288c765f396933bd83954c45401558644fc9dd28911
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size 20552
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patient_model/config.json
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{
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"_name_or_path": "monologg/biobert_v1.1_pubmed",
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"architectures": [
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"BertForSequenceClassification"
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],
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"attention_probs_dropout_prob": 0.1,
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"classifier_dropout": null,
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"hidden_act": "gelu",
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"hidden_dropout_prob": 0.1,
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"hidden_size": 768,
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"id2label": {
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"0": "LABEL_0",
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"1": "LABEL_1",
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"2": "LABEL_2",
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"3": "LABEL_3",
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"4": "LABEL_4",
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"5": "LABEL_5",
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"6": "LABEL_6",
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"7": "LABEL_7",
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"8": "LABEL_8",
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"9": "LABEL_9",
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"10": "LABEL_10",
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"11": "LABEL_11",
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"12": "LABEL_12",
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"13": "LABEL_13",
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"14": "LABEL_14",
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"15": "LABEL_15",
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"16": "LABEL_16",
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"17": "LABEL_17",
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"18": "LABEL_18",
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"19": "LABEL_19"
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},
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"initializer_range": 0.02,
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"intermediate_size": 3072,
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"label2id": {
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"LABEL_0": 0,
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"LABEL_1": 1,
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"LABEL_10": 10,
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"LABEL_11": 11,
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"LABEL_12": 12,
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"LABEL_13": 13,
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"LABEL_14": 14,
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"LABEL_15": 15,
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"LABEL_16": 16,
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"LABEL_17": 17,
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"LABEL_18": 18,
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"LABEL_19": 19,
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"LABEL_2": 2,
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"LABEL_3": 3,
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"LABEL_4": 4,
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"LABEL_5": 5,
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"LABEL_6": 6,
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"LABEL_7": 7,
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"LABEL_8": 8,
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"LABEL_9": 9
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},
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"layer_norm_eps": 1e-12,
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"max_position_embeddings": 512,
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"model_type": "bert",
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"num_attention_heads": 12,
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"num_hidden_layers": 12,
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"pad_token_id": 0,
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"position_embedding_type": "absolute",
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"problem_type": "single_label_classification",
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"torch_dtype": "float32",
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"transformers_version": "4.48.3",
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"type_vocab_size": 2,
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"use_cache": true,
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"vocab_size": 28996
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}
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patient_model/model.safetensors
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version https://git-lfs.github.com/spec/v1
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oid sha256:f00251561f3198827039d855c8f86e8904546cd8897959d5e87bdafc0620876f
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size 433326136
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patient_model/special_tokens_map.json
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{
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"cls_token": "[CLS]",
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"mask_token": "[MASK]",
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"pad_token": "[PAD]",
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"sep_token": "[SEP]",
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"unk_token": "[UNK]"
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}
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patient_model/tokenizer_config.json
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{
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"added_tokens_decoder": {
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"0": {
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"content": "[PAD]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"100": {
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"content": "[UNK]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"101": {
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"content": "[CLS]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"102": {
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"content": "[SEP]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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},
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"103": {
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"content": "[MASK]",
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"lstrip": false,
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"normalized": false,
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"rstrip": false,
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"single_word": false,
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"special": true
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}
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},
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"clean_up_tokenization_spaces": true,
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"cls_token": "[CLS]",
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"do_basic_tokenize": true,
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"do_lower_case": false,
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"extra_special_tokens": {},
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"mask_token": "[MASK]",
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"max_len": 512,
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"model_max_length": 512,
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"never_split": null,
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"pad_token": "[PAD]",
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"sep_token": "[SEP]",
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"strip_accents": null,
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"tokenize_chinese_chars": true,
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"tokenizer_class": "BertTokenizer",
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"unk_token": "[UNK]"
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}
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patient_model/training_args.bin
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version https://git-lfs.github.com/spec/v1
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oid sha256:868085341ff206f922bbb6d2a169b87b4c86250821d02c0a77f30fb2388c0de2
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size 5304
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patient_model/vocab.txt
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The diff for this file is too large to render.
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wandb/debug-internal.log
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{"time":"2025-02-16T11:37:13.203113118Z","level":"INFO","msg":"stream: starting","core version":"0.19.6","symlink path":"/content/wandb/run-20250216_113712-ypm5ne5j/logs/debug-core.log"}
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{"time":"2025-02-16T11:37:13.310296735Z","level":"INFO","msg":"created new stream","id":"ypm5ne5j"}
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| 47 |
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{"time":"2025-02-16T12:00:46.116547873Z","level":"INFO","msg":"Resuming system monitor"}
|
| 48 |
+
{"time":"2025-02-16T12:00:46.137061562Z","level":"INFO","msg":"Pausing system monitor"}
|
| 49 |
+
{"time":"2025-02-16T12:03:44.000976091Z","level":"INFO","msg":"Resuming system monitor"}
|
| 50 |
+
{"time":"2025-02-16T12:03:46.418849162Z","level":"INFO","msg":"Pausing system monitor"}
|
| 51 |
+
{"time":"2025-02-16T12:07:03.642233368Z","level":"INFO","msg":"Resuming system monitor"}
|
| 52 |
+
{"time":"2025-02-16T12:07:03.664948521Z","level":"INFO","msg":"Pausing system monitor"}
|
| 53 |
+
{"time":"2025-02-16T12:08:06.937381173Z","level":"INFO","msg":"Resuming system monitor"}
|
| 54 |
+
{"time":"2025-02-16T12:08:09.151566112Z","level":"INFO","msg":"Pausing system monitor"}
|
| 55 |
+
{"time":"2025-02-16T12:08:13.875342495Z","level":"INFO","msg":"Resuming system monitor"}
|
| 56 |
+
{"time":"2025-02-16T12:08:13.901174957Z","level":"INFO","msg":"Pausing system monitor"}
|
| 57 |
+
{"time":"2025-02-16T12:08:18.486956036Z","level":"INFO","msg":"Resuming system monitor"}
|
| 58 |
+
{"time":"2025-02-16T12:08:19.959282115Z","level":"INFO","msg":"Pausing system monitor"}
|
| 59 |
+
{"time":"2025-02-16T12:17:23.135555028Z","level":"INFO","msg":"Resuming system monitor"}
|
wandb/debug.log
ADDED
|
@@ -0,0 +1,105 @@
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|
| 1 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_setup.py:_flush():68] Current SDK version is 0.19.6
|
| 2 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_setup.py:_flush():68] Configure stats pid to 424
|
| 3 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_setup.py:_flush():68] Loading settings from /root/.config/wandb/settings
|
| 4 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_setup.py:_flush():68] Loading settings from /content/wandb/settings
|
| 5 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_setup.py:_flush():68] Loading settings from environment variables
|
| 6 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_init.py:setup_run_log_directory():637] Logging user logs to /content/wandb/run-20250216_113712-ypm5ne5j/logs/debug.log
|
| 7 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_init.py:setup_run_log_directory():638] Logging internal logs to /content/wandb/run-20250216_113712-ypm5ne5j/logs/debug-internal.log
|
| 8 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_init.py:monkeypatch_ipython():589] configuring jupyter hooks <wandb.sdk.wandb_init._WandbInit object at 0x7b854f1c3f90>
|
| 9 |
+
2025-02-16 11:37:12,773 INFO MainThread:424 [wandb_init.py:init():756] calling init triggers
|
| 10 |
+
2025-02-16 11:37:12,773 INFO MainThread:424 [wandb_init.py:init():761] wandb.init called with sweep_config: {}
|
| 11 |
+
config: {'_wandb': {}}
|
| 12 |
+
2025-02-16 11:37:12,773 INFO MainThread:424 [wandb_init.py:init():789] starting backend
|
| 13 |
+
2025-02-16 11:37:13,192 INFO MainThread:424 [wandb_init.py:init():793] sending inform_init request
|
| 14 |
+
2025-02-16 11:37:13,200 INFO MainThread:424 [backend.py:_multiprocessing_setup():97] multiprocessing start_methods=fork,spawn,forkserver, using: spawn
|
| 15 |
+
2025-02-16 11:37:13,201 INFO MainThread:424 [wandb_init.py:init():808] backend started and connected
|
| 16 |
+
2025-02-16 11:37:13,207 INFO MainThread:424 [wandb_run.py:_label_probe_notebook():1196] probe notebook
|
| 17 |
+
2025-02-16 11:37:13,461 INFO MainThread:424 [wandb_init.py:init():901] updated telemetry
|
| 18 |
+
2025-02-16 11:37:13,462 INFO MainThread:424 [wandb_init.py:init():936] communicating run to backend with 90.0 second timeout
|
| 19 |
+
2025-02-16 11:37:13,572 INFO MainThread:424 [wandb_init.py:init():994] starting run threads in backend
|
| 20 |
+
2025-02-16 11:37:13,961 INFO MainThread:424 [wandb_run.py:_console_start():2385] atexit reg
|
| 21 |
+
2025-02-16 11:37:13,961 INFO MainThread:424 [wandb_run.py:_redirect():2235] redirect: wrap_raw
|
| 22 |
+
2025-02-16 11:37:13,961 INFO MainThread:424 [wandb_run.py:_redirect():2300] Wrapping output streams.
|
| 23 |
+
2025-02-16 11:37:13,962 INFO MainThread:424 [wandb_run.py:_redirect():2325] Redirects installed.
|
| 24 |
+
2025-02-16 11:37:13,967 INFO MainThread:424 [wandb_init.py:init():1036] run started, returning control to user process
|
| 25 |
+
2025-02-16 11:37:13,970 INFO MainThread:424 [wandb_run.py:_config_callback():1253] config_cb None None {'return_dict': True, 'output_hidden_states': False, 'output_attentions': False, 'torchscript': False, 'torch_dtype': None, 'use_bfloat16': False, 'tf_legacy_loss': False, 'pruned_heads': {}, 'tie_word_embeddings': True, 'chunk_size_feed_forward': 0, 'is_encoder_decoder': False, 'is_decoder': False, 'cross_attention_hidden_size': None, 'add_cross_attention': False, 'tie_encoder_decoder': False, 'max_length': 20, 'min_length': 0, 'do_sample': False, 'early_stopping': False, 'num_beams': 1, 'num_beam_groups': 1, 'diversity_penalty': 0.0, 'temperature': 1.0, 'top_k': 50, 'top_p': 1.0, 'typical_p': 1.0, 'repetition_penalty': 1.0, 'length_penalty': 1.0, 'no_repeat_ngram_size': 0, 'encoder_no_repeat_ngram_size': 0, 'bad_words_ids': None, 'num_return_sequences': 1, 'output_scores': False, 'return_dict_in_generate': False, 'forced_bos_token_id': None, 'forced_eos_token_id': None, 'remove_invalid_values': False, 'exponential_decay_length_penalty': None, 'suppress_tokens': None, 'begin_suppress_tokens': None, 'architectures': ['BertForMaskedLM'], 'finetuning_task': None, 'id2label': {0: 'LABEL_0', 1: 'LABEL_1', 2: 'LABEL_2', 3: 'LABEL_3', 4: 'LABEL_4', 5: 'LABEL_5', 6: 'LABEL_6', 7: 'LABEL_7', 8: 'LABEL_8', 9: 'LABEL_9', 10: 'LABEL_10', 11: 'LABEL_11', 12: 'LABEL_12', 13: 'LABEL_13', 14: 'LABEL_14', 15: 'LABEL_15', 16: 'LABEL_16', 17: 'LABEL_17', 18: 'LABEL_18', 19: 'LABEL_19'}, 'label2id': {'LABEL_0': 0, 'LABEL_1': 1, 'LABEL_2': 2, 'LABEL_3': 3, 'LABEL_4': 4, 'LABEL_5': 5, 'LABEL_6': 6, 'LABEL_7': 7, 'LABEL_8': 8, 'LABEL_9': 9, 'LABEL_10': 10, 'LABEL_11': 11, 'LABEL_12': 12, 'LABEL_13': 13, 'LABEL_14': 14, 'LABEL_15': 15, 'LABEL_16': 16, 'LABEL_17': 17, 'LABEL_18': 18, 'LABEL_19': 19}, 'tokenizer_class': None, 'prefix': None, 'bos_token_id': None, 'pad_token_id': 0, 'eos_token_id': None, 'sep_token_id': None, 'decoder_start_token_id': None, 'task_specific_params': None, 'problem_type': None, '_name_or_path': 'monologg/biobert_v1.1_pubmed', '_attn_implementation_autoset': True, 'transformers_version': '4.48.3', 'model_type': 'bert', 'vocab_size': 28996, 'hidden_size': 768, 'num_hidden_layers': 12, 'num_attention_heads': 12, 'hidden_act': 'gelu', 'intermediate_size': 3072, 'hidden_dropout_prob': 0.1, 'attention_probs_dropout_prob': 0.1, 'max_position_embeddings': 512, 'type_vocab_size': 2, 'initializer_range': 0.02, 'layer_norm_eps': 1e-12, 'position_embedding_type': 'absolute', 'use_cache': True, 'classifier_dropout': None, 'output_dir': './results', 'overwrite_output_dir': False, 'do_train': False, 'do_eval': True, 'do_predict': False, 'eval_strategy': 'epoch', 'prediction_loss_only': False, 'per_device_train_batch_size': 16, 'per_device_eval_batch_size': 16, 'per_gpu_train_batch_size': None, 'per_gpu_eval_batch_size': None, 'gradient_accumulation_steps': 2, 'eval_accumulation_steps': None, 'eval_delay': 0, 'torch_empty_cache_steps': None, 'learning_rate': 2e-05, 'weight_decay': 0.01, 'adam_beta1': 0.9, 'adam_beta2': 0.999, 'adam_epsilon': 1e-08, 'max_grad_norm': 1.0, 'num_train_epochs': 5, 'max_steps': -1, 'lr_scheduler_type': 'linear', 'lr_scheduler_kwargs': {}, 'warmup_ratio': 0.0, 'warmup_steps': 500, 'log_level': 'passive', 'log_level_replica': 'warning', 'log_on_each_node': True, 'logging_dir': './logs', 'logging_strategy': 'steps', 'logging_first_step': False, 'logging_steps': 10, 'logging_nan_inf_filter': True, 'save_strategy': 'epoch', 'save_steps': 500, 'save_total_limit': 3, 'save_safetensors': True, 'save_on_each_node': False, 'save_only_model': False, 'restore_callback_states_from_checkpoint': False, 'no_cuda': False, 'use_cpu': False, 'use_mps_device': False, 'seed': 42, 'data_seed': None, 'jit_mode_eval': False, 'use_ipex': False, 'bf16': False, 'fp16': False, 'fp16_opt_level': 'O1', 'half_precision_backend': 'auto', 'bf16_full_eval': False, 'fp16_full_eval': False, 'tf32': None, 'local_rank': 0, 'ddp_backend': None, 'tpu_num_cores': None, 'tpu_metrics_debug': False, 'debug': [], 'dataloader_drop_last': False, 'eval_steps': None, 'dataloader_num_workers': 0, 'dataloader_prefetch_factor': None, 'past_index': -1, 'run_name': './results', 'disable_tqdm': False, 'remove_unused_columns': True, 'label_names': None, 'load_best_model_at_end': True, 'metric_for_best_model': 'eval_loss', 'greater_is_better': False, 'ignore_data_skip': False, 'fsdp': [], 'fsdp_min_num_params': 0, 'fsdp_config': {'min_num_params': 0, 'xla': False, 'xla_fsdp_v2': False, 'xla_fsdp_grad_ckpt': False}, 'fsdp_transformer_layer_cls_to_wrap': None, 'accelerator_config': {'split_batches': False, 'dispatch_batches': None, 'even_batches': True, 'use_seedable_sampler': True, 'non_blocking': False, 'gradient_accumulation_kwargs': None}, 'deepspeed': None, 'label_smoothing_factor': 0.0, 'optim': 'adamw_torch', 'optim_args': None, 'adafactor': False, 'group_by_length': False, 'length_column_name': 'length', 'report_to': ['tensorboard', 'wandb'], 'ddp_find_unused_parameters': None, 'ddp_bucket_cap_mb': None, 'ddp_broadcast_buffers': None, 'dataloader_pin_memory': True, 'dataloader_persistent_workers': False, 'skip_memory_metrics': True, 'use_legacy_prediction_loop': False, 'push_to_hub': False, 'resume_from_checkpoint': None, 'hub_model_id': None, 'hub_strategy': 'every_save', 'hub_token': '<HUB_TOKEN>', 'hub_private_repo': None, 'hub_always_push': False, 'gradient_checkpointing': False, 'gradient_checkpointing_kwargs': None, 'include_inputs_for_metrics': False, 'include_for_metrics': [], 'eval_do_concat_batches': True, 'fp16_backend': 'auto', 'evaluation_strategy': 'epoch', 'push_to_hub_model_id': None, 'push_to_hub_organization': None, 'push_to_hub_token': '<PUSH_TO_HUB_TOKEN>', 'mp_parameters': '', 'auto_find_batch_size': False, 'full_determinism': False, 'torchdynamo': None, 'ray_scope': 'last', 'ddp_timeout': 1800, 'torch_compile': False, 'torch_compile_backend': None, 'torch_compile_mode': None, 'dispatch_batches': None, 'split_batches': None, 'include_tokens_per_second': False, 'include_num_input_tokens_seen': False, 'neftune_noise_alpha': None, 'optim_target_modules': None, 'batch_eval_metrics': False, 'eval_on_start': False, 'use_liger_kernel': False, 'eval_use_gather_object': False, 'average_tokens_across_devices': False}
|
| 26 |
+
2025-02-16 11:37:13,973 INFO MainThread:424 [wandb_config.py:__setitem__():154] config set model/num_parameters = 108325652 - <bound method Run._config_callback of <wandb.sdk.wandb_run.Run object at 0x7b854e7497d0>>
|
| 27 |
+
2025-02-16 11:37:13,973 INFO MainThread:424 [wandb_run.py:_config_callback():1253] config_cb model/num_parameters 108325652 None
|
| 28 |
+
2025-02-16 11:38:48,229 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 29 |
+
2025-02-16 11:38:48,229 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 30 |
+
2025-02-16 11:39:39,362 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 31 |
+
2025-02-16 11:39:41,893 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 32 |
+
2025-02-16 11:39:41,893 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 33 |
+
2025-02-16 11:39:54,593 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 34 |
+
2025-02-16 11:39:56,811 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 35 |
+
2025-02-16 11:39:56,811 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 36 |
+
2025-02-16 11:41:06,824 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 37 |
+
2025-02-16 11:41:07,752 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 38 |
+
2025-02-16 11:41:07,752 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 39 |
+
2025-02-16 11:42:12,191 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 40 |
+
2025-02-16 11:42:12,282 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 41 |
+
2025-02-16 11:42:12,283 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 42 |
+
2025-02-16 11:42:41,349 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 43 |
+
2025-02-16 11:42:41,351 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 44 |
+
2025-02-16 11:42:41,351 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 45 |
+
2025-02-16 11:53:23,915 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 46 |
+
2025-02-16 11:53:23,959 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 47 |
+
2025-02-16 11:53:23,959 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 48 |
+
2025-02-16 11:54:40,152 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 49 |
+
2025-02-16 11:54:43,074 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 50 |
+
2025-02-16 11:54:43,074 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 51 |
+
2025-02-16 11:54:47,046 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 52 |
+
2025-02-16 11:54:47,450 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 53 |
+
2025-02-16 11:54:47,450 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 54 |
+
2025-02-16 11:55:29,494 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 55 |
+
2025-02-16 11:55:33,323 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 56 |
+
2025-02-16 11:55:33,323 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 57 |
+
2025-02-16 11:55:43,659 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 58 |
+
2025-02-16 11:55:45,971 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 59 |
+
2025-02-16 11:55:45,971 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 60 |
+
2025-02-16 11:55:51,874 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 61 |
+
2025-02-16 11:55:51,924 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 62 |
+
2025-02-16 11:55:51,924 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 63 |
+
2025-02-16 11:56:38,941 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 64 |
+
2025-02-16 11:56:39,032 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 65 |
+
2025-02-16 11:56:39,033 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 66 |
+
2025-02-16 11:57:37,133 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 67 |
+
2025-02-16 11:57:37,135 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 68 |
+
2025-02-16 11:57:37,135 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 69 |
+
2025-02-16 11:57:56,325 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 70 |
+
2025-02-16 11:57:56,327 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 71 |
+
2025-02-16 11:57:56,327 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 72 |
+
2025-02-16 11:58:22,001 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 73 |
+
2025-02-16 11:58:22,004 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 74 |
+
2025-02-16 11:58:22,004 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 75 |
+
2025-02-16 11:58:46,666 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 76 |
+
2025-02-16 11:58:46,668 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 77 |
+
2025-02-16 11:58:46,668 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 78 |
+
2025-02-16 11:59:06,143 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 79 |
+
2025-02-16 11:59:06,144 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 80 |
+
2025-02-16 11:59:06,144 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
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| 81 |
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2025-02-16 11:59:33,233 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
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| 82 |
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2025-02-16 11:59:33,265 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
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| 83 |
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2025-02-16 11:59:33,265 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 84 |
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2025-02-16 12:00:42,093 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
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| 85 |
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2025-02-16 12:00:44,509 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
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| 86 |
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2025-02-16 12:00:44,510 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
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| 87 |
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| 89 |
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2025-02-16 12:00:46,136 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
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| 90 |
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2025-02-16 12:03:44,000 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 91 |
+
2025-02-16 12:03:46,418 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
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| 92 |
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2025-02-16 12:03:46,418 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
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| 93 |
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2025-02-16 12:07:03,641 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
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| 94 |
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2025-02-16 12:07:03,664 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
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| 95 |
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2025-02-16 12:07:03,664 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 96 |
+
2025-02-16 12:08:06,936 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
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| 97 |
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2025-02-16 12:08:09,151 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
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| 99 |
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2025-02-16 12:08:13,874 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
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| 100 |
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2025-02-16 12:08:13,900 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
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| 103 |
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2025-02-16 12:08:19,958 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 104 |
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2025-02-16 12:08:19,959 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
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| 105 |
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2025-02-16 12:17:23,135 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
wandb/latest-run/files/output.log
ADDED
|
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|
| 1 |
+
Classification Report:
|
| 2 |
+
precision recall f1-score support
|
| 3 |
+
|
| 4 |
+
Acute Myocardial Infarction 1.00 1.00 1.00 44
|
| 5 |
+
Acute Renal Failure 1.00 1.00 1.00 59
|
| 6 |
+
Asthma 1.00 1.00 1.00 53
|
| 7 |
+
Cerebrovascular Accident 1.00 1.00 1.00 46
|
| 8 |
+
Chronic Kidney Disease 1.00 1.00 1.00 57
|
| 9 |
+
Chronic Obstructive Pulmonary Disease 1.00 1.00 1.00 54
|
| 10 |
+
Community-Acquired Pneumonia 1.00 1.00 1.00 43
|
| 11 |
+
Congestive Heart Failure 1.00 1.00 1.00 53
|
| 12 |
+
Deep Vein Thrombosis 1.00 1.00 1.00 56
|
| 13 |
+
Gastroesophageal Reflux Disease 1.00 1.00 1.00 37
|
| 14 |
+
Hypertension 1.00 1.00 1.00 44
|
| 15 |
+
Liver Cirrhosis 1.00 1.00 1.00 44
|
| 16 |
+
Peptic Ulcer Disease 1.00 1.00 1.00 56
|
| 17 |
+
Pulmonary Embolism 1.00 1.00 1.00 51
|
| 18 |
+
Rheumatoid Arthritis 1.00 1.00 1.00 50
|
| 19 |
+
Sepsis 1.00 1.00 1.00 46
|
| 20 |
+
Septic Shock 1.00 1.00 1.00 48
|
| 21 |
+
Stroke 1.00 1.00 1.00 52
|
| 22 |
+
Type 2 Diabetes Mellitus 1.00 1.00 1.00 62
|
| 23 |
+
Urinary Tract Infection 1.00 1.00 1.00 45
|
| 24 |
+
|
| 25 |
+
accuracy 1.00 1000
|
| 26 |
+
macro avg 1.00 1.00 1.00 1000
|
| 27 |
+
weighted avg 1.00 1.00 1.00 1000
|
| 28 |
+
|
| 29 |
+
Classification Report:
|
| 30 |
+
precision recall f1-score support
|
| 31 |
+
|
| 32 |
+
Acute Myocardial Infarction 1.00 1.00 1.00 44
|
| 33 |
+
Acute Renal Failure 1.00 1.00 1.00 59
|
| 34 |
+
Asthma 1.00 1.00 1.00 53
|
| 35 |
+
Cerebrovascular Accident 1.00 1.00 1.00 46
|
| 36 |
+
Chronic Kidney Disease 1.00 1.00 1.00 57
|
| 37 |
+
Chronic Obstructive Pulmonary Disease 1.00 1.00 1.00 54
|
| 38 |
+
Community-Acquired Pneumonia 1.00 1.00 1.00 43
|
| 39 |
+
Congestive Heart Failure 1.00 1.00 1.00 53
|
| 40 |
+
Deep Vein Thrombosis 1.00 1.00 1.00 56
|
| 41 |
+
Gastroesophageal Reflux Disease 1.00 1.00 1.00 37
|
| 42 |
+
Hypertension 1.00 1.00 1.00 44
|
| 43 |
+
Liver Cirrhosis 1.00 1.00 1.00 44
|
| 44 |
+
Peptic Ulcer Disease 1.00 1.00 1.00 56
|
| 45 |
+
Pulmonary Embolism 1.00 1.00 1.00 51
|
| 46 |
+
Rheumatoid Arthritis 1.00 1.00 1.00 50
|
| 47 |
+
Sepsis 1.00 1.00 1.00 46
|
| 48 |
+
Septic Shock 1.00 1.00 1.00 48
|
| 49 |
+
Stroke 1.00 1.00 1.00 52
|
| 50 |
+
Type 2 Diabetes Mellitus 1.00 1.00 1.00 62
|
| 51 |
+
Urinary Tract Infection 1.00 1.00 1.00 45
|
| 52 |
+
|
| 53 |
+
accuracy 1.00 1000
|
| 54 |
+
macro avg 1.00 1.00 1.00 1000
|
| 55 |
+
weighted avg 1.00 1.00 1.00 1000
|
| 56 |
+
|
| 57 |
+
Collecting fastapi
|
| 58 |
+
Downloading fastapi-0.115.8-py3-none-any.whl.metadata (27 kB)
|
| 59 |
+
Collecting uvicorn
|
| 60 |
+
Downloading uvicorn-0.34.0-py3-none-any.whl.metadata (6.5 kB)
|
| 61 |
+
Collecting starlette<0.46.0,>=0.40.0 (from fastapi)
|
| 62 |
+
Downloading starlette-0.45.3-py3-none-any.whl.metadata (6.3 kB)
|
| 63 |
+
Requirement already satisfied: pydantic!=1.8,!=1.8.1,!=2.0.0,!=2.0.1,!=2.1.0,<3.0.0,>=1.7.4 in /usr/local/lib/python3.11/dist-packages (from fastapi) (2.10.6)
|
| 64 |
+
Requirement already satisfied: typing-extensions>=4.8.0 in /usr/local/lib/python3.11/dist-packages (from fastapi) (4.12.2)
|
| 65 |
+
Requirement already satisfied: click>=7.0 in /usr/local/lib/python3.11/dist-packages (from uvicorn) (8.1.8)
|
| 66 |
+
Requirement already satisfied: h11>=0.8 in /usr/local/lib/python3.11/dist-packages (from uvicorn) (0.14.0)
|
| 67 |
+
Requirement already satisfied: annotated-types>=0.6.0 in /usr/local/lib/python3.11/dist-packages (from pydantic!=1.8,!=1.8.1,!=2.0.0,!=2.0.1,!=2.1.0,<3.0.0,>=1.7.4->fastapi) (0.7.0)
|
| 68 |
+
Requirement already satisfied: pydantic-core==2.27.2 in /usr/local/lib/python3.11/dist-packages (from pydantic!=1.8,!=1.8.1,!=2.0.0,!=2.0.1,!=2.1.0,<3.0.0,>=1.7.4->fastapi) (2.27.2)
|
| 69 |
+
Requirement already satisfied: anyio<5,>=3.6.2 in /usr/local/lib/python3.11/dist-packages (from starlette<0.46.0,>=0.40.0->fastapi) (3.7.1)
|
| 70 |
+
Requirement already satisfied: idna>=2.8 in /usr/local/lib/python3.11/dist-packages (from anyio<5,>=3.6.2->starlette<0.46.0,>=0.40.0->fastapi) (3.10)
|
| 71 |
+
Requirement already satisfied: sniffio>=1.1 in /usr/local/lib/python3.11/dist-packages (from anyio<5,>=3.6.2->starlette<0.46.0,>=0.40.0->fastapi) (1.3.1)
|
| 72 |
+
Downloading fastapi-0.115.8-py3-none-any.whl (94 kB)
|
| 73 |
+
[2K [90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━[0m [32m94.8/94.8 kB[0m [31m4.8 MB/s[0m eta [36m0:00:00[0m
|
| 74 |
+
[?25hDownloading uvicorn-0.34.0-py3-none-any.whl (62 kB)
|
| 75 |
+
[2K [90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━[0m [32m62.3/62.3 kB[0m [31m7.4 MB/s[0m eta [36m0:00:00[0m
|
| 76 |
+
[?25hDownloading starlette-0.45.3-py3-none-any.whl (71 kB)
|
| 77 |
+
[2K [90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━[0m [32m71.5/71.5 kB[0m [31m8.6 MB/s[0m eta [36m0:00:00[0m
|
| 78 |
+
[?25hInstalling collected packages: uvicorn, starlette, fastapi
|
| 79 |
+
Successfully installed fastapi-0.115.8 starlette-0.45.3 uvicorn-0.34.0
|
| 80 |
+
Collecting PyPDF2
|
| 81 |
+
Downloading pypdf2-3.0.1-py3-none-any.whl.metadata (6.8 kB)
|
| 82 |
+
Downloading pypdf2-3.0.1-py3-none-any.whl (232 kB)
|
| 83 |
+
[2K [90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━[0m [32m232.6/232.6 kB[0m [31m4.4 MB/s[0m eta [36m0:00:00[0ma [36m0:00:01[0m
|
| 84 |
+
[?25hInstalling collected packages: PyPDF2
|
| 85 |
+
Successfully installed PyPDF2-3.0.1
|
| 86 |
+
[31mERROR: Could not find a version that satisfies the requirement io (from versions: none)[0m[31m
|
| 87 |
+
[0m[31mERROR: No matching distribution found for io[0m[31m
|
| 88 |
+
[0mRequirement already satisfied: PyPDF2 in /usr/local/lib/python3.11/dist-packages (3.0.1)
|
| 89 |
+
ERROR:fastapi:Form data requires "python-multipart" to be installed.
|
| 90 |
+
You can install "python-multipart" with:
|
| 91 |
+
|
| 92 |
+
pip install python-multipart
|
| 93 |
+
Collecting python-multipart
|
| 94 |
+
Downloading python_multipart-0.0.20-py3-none-any.whl.metadata (1.8 kB)
|
| 95 |
+
Downloading python_multipart-0.0.20-py3-none-any.whl (24 kB)
|
| 96 |
+
Installing collected packages: python-multipart
|
| 97 |
+
Successfully installed python-multipart-0.0.20
|
| 98 |
+
Requirement already satisfied: nest_asyncio in /usr/local/lib/python3.11/dist-packages (1.6.0)
|
| 99 |
+
Collecting pyngrok
|
| 100 |
+
Downloading pyngrok-7.2.3-py3-none-any.whl.metadata (8.7 kB)
|
| 101 |
+
Requirement already satisfied: PyYAML>=5.1 in /usr/local/lib/python3.11/dist-packages (from pyngrok) (6.0.2)
|
| 102 |
+
Downloading pyngrok-7.2.3-py3-none-any.whl (23 kB)
|
| 103 |
+
Installing collected packages: pyngrok
|
| 104 |
+
Successfully installed pyngrok-7.2.3
|
| 105 |
+
Requirement already satisfied: fastapi in /usr/local/lib/python3.11/dist-packages (0.115.8)
|
| 106 |
+
Requirement already satisfied: uvicorn in /usr/local/lib/python3.11/dist-packages (0.34.0)
|
| 107 |
+
Requirement already satisfied: jinja2 in /usr/local/lib/python3.11/dist-packages (3.1.5)
|
| 108 |
+
Requirement already satisfied: python-multipart in /usr/local/lib/python3.11/dist-packages (0.0.20)
|
| 109 |
+
Requirement already satisfied: PyPDF2 in /usr/local/lib/python3.11/dist-packages (3.0.1)
|
| 110 |
+
Requirement already satisfied: pydantic in /usr/local/lib/python3.11/dist-packages (2.10.6)
|
| 111 |
+
Requirement already satisfied: nest_asyncio in /usr/local/lib/python3.11/dist-packages (1.6.0)
|
| 112 |
+
Requirement already satisfied: pyngrok in /usr/local/lib/python3.11/dist-packages (7.2.3)
|
| 113 |
+
Requirement already satisfied: starlette<0.46.0,>=0.40.0 in /usr/local/lib/python3.11/dist-packages (from fastapi) (0.45.3)
|
| 114 |
+
Requirement already satisfied: typing-extensions>=4.8.0 in /usr/local/lib/python3.11/dist-packages (from fastapi) (4.12.2)
|
| 115 |
+
Requirement already satisfied: click>=7.0 in /usr/local/lib/python3.11/dist-packages (from uvicorn) (8.1.8)
|
| 116 |
+
Requirement already satisfied: h11>=0.8 in /usr/local/lib/python3.11/dist-packages (from uvicorn) (0.14.0)
|
| 117 |
+
Requirement already satisfied: MarkupSafe>=2.0 in /usr/local/lib/python3.11/dist-packages (from jinja2) (3.0.2)
|
| 118 |
+
Requirement already satisfied: annotated-types>=0.6.0 in /usr/local/lib/python3.11/dist-packages (from pydantic) (0.7.0)
|
| 119 |
+
Requirement already satisfied: pydantic-core==2.27.2 in /usr/local/lib/python3.11/dist-packages (from pydantic) (2.27.2)
|
| 120 |
+
Requirement already satisfied: PyYAML>=5.1 in /usr/local/lib/python3.11/dist-packages (from pyngrok) (6.0.2)
|
| 121 |
+
Requirement already satisfied: anyio<5,>=3.6.2 in /usr/local/lib/python3.11/dist-packages (from starlette<0.46.0,>=0.40.0->fastapi) (3.7.1)
|
| 122 |
+
Requirement already satisfied: idna>=2.8 in /usr/local/lib/python3.11/dist-packages (from anyio<5,>=3.6.2->starlette<0.46.0,>=0.40.0->fastapi) (3.10)
|
| 123 |
+
Requirement already satisfied: sniffio>=1.1 in /usr/local/lib/python3.11/dist-packages (from anyio<5,>=3.6.2->starlette<0.46.0,>=0.40.0->fastapi) (1.3.1)
|
| 124 |
+
adding: content/ (stored 0%)
|
| 125 |
+
|
| 126 |
+
ERROR:pyngrok.process.ngrok:t=2025-02-16T12:08:19+0000 lvl=eror msg="failed to reconnect session" obj=tunnels.session err="authentication failed: Usage of ngrok requires a verified account and authtoken.\n\nSign up for an account: https://dashboard.ngrok.com/signup\nInstall your authtoken: https://dashboard.ngrok.com/get-started/your-authtoken\r\n\r\nERR_NGROK_4018\r\n"
|
| 127 |
+
ERROR:pyngrok.process.ngrok:t=2025-02-16T12:08:19+0000 lvl=eror msg="session closing" obj=tunnels.session err="authentication failed: Usage of ngrok requires a verified account and authtoken.\n\nSign up for an account: https://dashboard.ngrok.com/signup\nInstall your authtoken: https://dashboard.ngrok.com/get-started/your-authtoken\r\n\r\nERR_NGROK_4018\r\n"
|
| 128 |
+
ERROR:pyngrok.process.ngrok:t=2025-02-16T12:08:19+0000 lvl=eror msg="terminating with error" obj=app err="authentication failed: Usage of ngrok requires a verified account and authtoken.\n\nSign up for an account: https://dashboard.ngrok.com/signup\nInstall your authtoken: https://dashboard.ngrok.com/get-started/your-authtoken\r\n\r\nERR_NGROK_4018\r\n"
|
| 129 |
+
CRITICAL:pyngrok.process.ngrok:t=2025-02-16T12:08:19+0000 lvl=crit msg="command failed" err="authentication failed: Usage of ngrok requires a verified account and authtoken.\n\nSign up for an account: https://dashboard.ngrok.com/signup\nInstall your authtoken: https://dashboard.ngrok.com/get-started/your-authtoken\r\n\r\nERR_NGROK_4018\r\n"
|
| 130 |
+
adding: content/.config/ (stored 0%)
|
| 131 |
+
adding: content/.config/default_configs.db (deflated 98%)
|
| 132 |
+
adding: content/.config/configurations/ (stored 0%)
|
| 133 |
+
adding: content/.config/configurations/config_default (deflated 15%)
|
| 134 |
+
adding: content/.config/config_sentinel (stored 0%)
|
| 135 |
+
adding: content/.config/gce (stored 0%)
|
| 136 |
+
adding: content/.config/hidden_gcloud_config_universe_descriptor_data_cache_configs.db (deflated 97%)
|
| 137 |
+
adding: content/.config/.last_opt_in_prompt.yaml (stored 0%)
|
| 138 |
+
adding: content/.config/.last_survey_prompt.yaml (stored 0%)
|
| 139 |
+
adding: content/.config/.last_update_check.json (deflated 24%)
|
| 140 |
+
adding: content/.config/logs/ (stored 0%)
|
| 141 |
+
adding: content/.config/logs/2025.02.13/ (stored 0%)
|
| 142 |
+
adding: content/.config/logs/2025.02.13/14.18.34.923015.log (deflated 58%)
|
| 143 |
+
adding: content/.config/logs/2025.02.13/14.18.22.924899.log (deflated 58%)
|
| 144 |
+
adding: content/.config/logs/2025.02.13/14.17.52.239776.log (deflated 93%)
|
| 145 |
+
adding: content/.config/logs/2025.02.13/14.18.44.294756.log (deflated 56%)
|
| 146 |
+
adding: content/.config/logs/2025.02.13/14.18.43.611991.log (deflated 57%)
|
| 147 |
+
adding: content/.config/logs/2025.02.13/14.18.31.091747.log (deflated 87%)
|
| 148 |
+
adding: content/.config/active_config (stored 0%)
|
| 149 |
+
adding: content/patient 2 report.pdf (deflated 9%)
|
| 150 |
+
adding: content/results/ (stored 0%)
|
| 151 |
+
adding: content/results/checkpoint-375/ (stored 0%)
|
| 152 |
+
adding: content/results/checkpoint-375/scheduler.pt (deflated 55%)
|
| 153 |
+
adding: content/results/checkpoint-375/config.json (deflated 62%)
|
| 154 |
+
adding: content/results/checkpoint-375/optimizer.pt (deflated 27%)
|
| 155 |
+
adding: content/results/checkpoint-375/model.safetensors (deflated 7%)
|
| 156 |
+
adding: content/results/checkpoint-375/trainer_state.json (deflated 78%)
|
| 157 |
+
adding: content/results/checkpoint-375/training_args.bin (deflated 51%)
|
| 158 |
+
adding: content/results/checkpoint-375/rng_state.pth (deflated 25%)
|
| 159 |
+
adding: content/results/checkpoint-625/ (stored 0%)
|
| 160 |
+
adding: content/results/checkpoint-625/scheduler.pt (deflated 56%)
|
| 161 |
+
adding: content/results/checkpoint-625/config.json (deflated 62%)
|
| 162 |
+
adding: content/results/checkpoint-625/optimizer.pt (deflated 27%)
|
| 163 |
+
adding: content/results/checkpoint-625/model.safetensors (deflated 7%)
|
| 164 |
+
adding: content/results/checkpoint-625/trainer_state.json (deflated 80%)
|
| 165 |
+
adding: content/results/checkpoint-625/training_args.bin (deflated 51%)
|
| 166 |
+
adding: content/results/checkpoint-625/rng_state.pth (deflated 25%)
|
| 167 |
+
adding: content/results/trainer_state.json (deflated 80%)
|
| 168 |
+
adding: content/results/checkpoint-500/ (stored 0%)
|
| 169 |
+
adding: content/results/checkpoint-500/scheduler.pt (deflated 57%)
|
| 170 |
+
adding: content/results/checkpoint-500/config.json (deflated 62%)
|
| 171 |
+
adding: content/results/checkpoint-500/optimizer.pt (deflated 27%)
|
| 172 |
+
adding: content/results/checkpoint-500/model.safetensors (deflated 7%)
|
| 173 |
+
adding: content/results/checkpoint-500/trainer_state.json (deflated 79%)
|
| 174 |
+
adding: content/results/checkpoint-500/training_args.bin (deflated 51%)
|
| 175 |
+
adding: content/results/checkpoint-500/rng_state.pth (deflated 25%)
|
| 176 |
+
adding: content/patient_model/ (stored 0%)
|
| 177 |
+
adding: content/patient_model/config.json (deflated 62%)
|
| 178 |
+
adding: content/patient_model/tokenizer_config.json (deflated 75%)
|
| 179 |
+
adding: content/patient_model/model.safetensors
|
wandb/latest-run/files/requirements.txt
ADDED
|
@@ -0,0 +1,615 @@
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|
| 1 |
+
xxhash==3.5.0
|
| 2 |
+
multiprocess==0.70.16
|
| 3 |
+
dill==0.3.8
|
| 4 |
+
datasets==3.3.0
|
| 5 |
+
google-colab==1.0.0
|
| 6 |
+
nvidia-cuda-nvcc-cu12==12.5.82
|
| 7 |
+
google-pasta==0.2.0
|
| 8 |
+
psycopg2==2.9.10
|
| 9 |
+
bigquery-magics==0.5.0
|
| 10 |
+
referencing==0.36.2
|
| 11 |
+
text-unidecode==1.3
|
| 12 |
+
aiohttp==3.11.12
|
| 13 |
+
arviz==0.20.0
|
| 14 |
+
Markdown==3.7
|
| 15 |
+
Sphinx==8.1.3
|
| 16 |
+
gym==0.25.2
|
| 17 |
+
altair==5.5.0
|
| 18 |
+
opt_einsum==3.4.0
|
| 19 |
+
datascience==0.17.6
|
| 20 |
+
geographiclib==2.0
|
| 21 |
+
nest-asyncio==1.6.0
|
| 22 |
+
nvidia-cuda-cupti-cu12==12.5.82
|
| 23 |
+
orjson==3.10.15
|
| 24 |
+
imageio==2.37.0
|
| 25 |
+
sigstore-protobuf-specs==0.3.2
|
| 26 |
+
mistune==3.1.1
|
| 27 |
+
flatbuffers==25.2.10
|
| 28 |
+
PyJWT==2.10.1
|
| 29 |
+
logical-unification==0.4.6
|
| 30 |
+
lxml==5.3.1
|
| 31 |
+
google-cloud-core==2.4.1
|
| 32 |
+
fastai==2.7.18
|
| 33 |
+
pylibcugraph-cu12==24.12.0
|
| 34 |
+
google-ai-generativelanguage==0.6.15
|
| 35 |
+
email_validator==2.2.0
|
| 36 |
+
scs==3.2.7.post2
|
| 37 |
+
pillow==11.1.0
|
| 38 |
+
docker-pycreds==0.4.0
|
| 39 |
+
dnspython==2.7.0
|
| 40 |
+
cmake==3.31.4
|
| 41 |
+
thinc==8.2.5
|
| 42 |
+
fastrlock==0.8.3
|
| 43 |
+
immutabledict==4.2.1
|
| 44 |
+
entrypoints==0.4
|
| 45 |
+
rpy2==3.4.2
|
| 46 |
+
huggingface-hub==0.28.1
|
| 47 |
+
duckdb==1.1.3
|
| 48 |
+
pandas-stubs==2.2.2.240909
|
| 49 |
+
toolz==0.12.1
|
| 50 |
+
jax-cuda12-plugin==0.4.33
|
| 51 |
+
nibabel==5.3.2
|
| 52 |
+
sphinxcontrib-applehelp==2.0.0
|
| 53 |
+
pynvjitlink-cu12==0.5.0
|
| 54 |
+
babel==2.17.0
|
| 55 |
+
future==1.0.0
|
| 56 |
+
plotnine==0.14.5
|
| 57 |
+
matplotlib-inline==0.1.7
|
| 58 |
+
srsly==2.5.1
|
| 59 |
+
textblob==0.19.0
|
| 60 |
+
pyperclip==1.9.0
|
| 61 |
+
httplib2==0.22.0
|
| 62 |
+
matplotlib==3.10.0
|
| 63 |
+
xlrd==2.0.1
|
| 64 |
+
jupyter-server==1.24.0
|
| 65 |
+
google-cloud-bigquery-storage==2.28.0
|
| 66 |
+
pytensor==2.27.1
|
| 67 |
+
sphinxcontrib-qthelp==2.0.0
|
| 68 |
+
typer==0.15.1
|
| 69 |
+
tensorboard-data-server==0.7.2
|
| 70 |
+
google-cloud-datastore==2.20.2
|
| 71 |
+
plotly==5.24.1
|
| 72 |
+
ipython-sql==0.5.0
|
| 73 |
+
etuples==0.3.9
|
| 74 |
+
PyDrive2==1.21.3
|
| 75 |
+
shap==0.46.0
|
| 76 |
+
google-auth-httplib2==0.2.0
|
| 77 |
+
spacy-loggers==1.0.5
|
| 78 |
+
cachetools==5.5.1
|
| 79 |
+
platformdirs==4.3.6
|
| 80 |
+
MarkupSafe==3.0.2
|
| 81 |
+
wrapt==1.17.2
|
| 82 |
+
docstring_parser==0.16
|
| 83 |
+
sentry-sdk==2.21.0
|
| 84 |
+
kaggle==1.6.17
|
| 85 |
+
highspy==1.9.0
|
| 86 |
+
cloudpickle==3.1.1
|
| 87 |
+
jsonpickle==4.0.1
|
| 88 |
+
pygit2==1.17.0
|
| 89 |
+
python-dateutil==2.8.2
|
| 90 |
+
python-louvain==0.16
|
| 91 |
+
opencv-python-headless==4.11.0.86
|
| 92 |
+
namex==0.0.8
|
| 93 |
+
folium==0.19.4
|
| 94 |
+
Pygments==2.18.0
|
| 95 |
+
ptyprocess==0.7.0
|
| 96 |
+
rpds-py==0.22.3
|
| 97 |
+
optax==0.2.4
|
| 98 |
+
nvidia-cublas-cu12==12.5.3.2
|
| 99 |
+
joblib==1.4.2
|
| 100 |
+
pyparsing==3.2.1
|
| 101 |
+
python-utils==3.9.1
|
| 102 |
+
astropy==7.0.1
|
| 103 |
+
decorator==4.4.2
|
| 104 |
+
multidict==6.1.0
|
| 105 |
+
urllib3==2.3.0
|
| 106 |
+
orbax-checkpoint==0.6.4
|
| 107 |
+
python-slugify==8.0.4
|
| 108 |
+
google-auth==2.27.0
|
| 109 |
+
setproctitle==1.3.4
|
| 110 |
+
google-cloud-bigquery-connection==1.17.0
|
| 111 |
+
multitasking==0.0.11
|
| 112 |
+
statsmodels==0.14.4
|
| 113 |
+
GDAL==3.6.4
|
| 114 |
+
zipp==3.21.0
|
| 115 |
+
cmdstanpy==1.2.5
|
| 116 |
+
regex==2024.11.6
|
| 117 |
+
torch==2.5.1+cu124
|
| 118 |
+
preshed==3.0.9
|
| 119 |
+
Send2Trash==1.8.3
|
| 120 |
+
catalogue==2.0.10
|
| 121 |
+
nvidia-curand-cu12==10.3.6.82
|
| 122 |
+
xgboost==2.1.4
|
| 123 |
+
CacheControl==0.14.2
|
| 124 |
+
prompt_toolkit==3.0.50
|
| 125 |
+
opencv-contrib-python==4.11.0.86
|
| 126 |
+
stringzilla==3.11.3
|
| 127 |
+
cycler==0.12.1
|
| 128 |
+
absl-py==1.4.0
|
| 129 |
+
music21==9.3.0
|
| 130 |
+
nvidia-nvjitlink-cu12==12.5.82
|
| 131 |
+
tensorflow-hub==0.16.1
|
| 132 |
+
argon2-cffi==23.1.0
|
| 133 |
+
pydantic_core==2.27.2
|
| 134 |
+
keras==3.8.0
|
| 135 |
+
tuf==5.1.0
|
| 136 |
+
wasabi==1.1.3
|
| 137 |
+
geemap==0.35.1
|
| 138 |
+
google-api-core==2.19.2
|
| 139 |
+
keras-nlp==0.18.1
|
| 140 |
+
networkx==3.4.2
|
| 141 |
+
grpcio-status==1.62.3
|
| 142 |
+
simsimd==6.2.1
|
| 143 |
+
numexpr==2.10.2
|
| 144 |
+
snowballstemmer==2.2.0
|
| 145 |
+
tcmlib==1.2.0
|
| 146 |
+
opencv-python==4.11.0.86
|
| 147 |
+
Pyomo==6.8.2
|
| 148 |
+
scikit-learn==1.6.1
|
| 149 |
+
pandas-gbq==0.26.1
|
| 150 |
+
dlib==19.24.2
|
| 151 |
+
intel-cmplr-lib-ur==2025.0.4
|
| 152 |
+
langchain-core==0.3.35
|
| 153 |
+
smart-open==7.1.0
|
| 154 |
+
sphinxcontrib-devhelp==2.0.0
|
| 155 |
+
importlib_metadata==8.6.1
|
| 156 |
+
pyzmq==24.0.1
|
| 157 |
+
tensorflow-datasets==4.9.7
|
| 158 |
+
pathlib==1.0.1
|
| 159 |
+
flax==0.10.3
|
| 160 |
+
astropy-iers-data==0.2025.2.10.0.33.26
|
| 161 |
+
jupyter-leaflet==0.19.2
|
| 162 |
+
en-core-web-sm==3.7.1
|
| 163 |
+
click==8.1.8
|
| 164 |
+
jupyterlab_pygments==0.3.0
|
| 165 |
+
sentencepiece==0.2.0
|
| 166 |
+
optree==0.14.0
|
| 167 |
+
termcolor==2.5.0
|
| 168 |
+
gcsfs==2024.10.0
|
| 169 |
+
kiwisolver==1.4.8
|
| 170 |
+
torchaudio==2.5.1+cu124
|
| 171 |
+
pluggy==1.5.0
|
| 172 |
+
smmap==5.0.2
|
| 173 |
+
rfc8785==0.1.4
|
| 174 |
+
pyasn1==0.6.1
|
| 175 |
+
six==1.17.0
|
| 176 |
+
sphinxcontrib-serializinghtml==2.0.0
|
| 177 |
+
imagesize==1.4.1
|
| 178 |
+
simple-parsing==0.1.7
|
| 179 |
+
opentelemetry-sdk==1.16.0
|
| 180 |
+
distro==1.9.0
|
| 181 |
+
ply==3.11
|
| 182 |
+
PySocks==1.7.1
|
| 183 |
+
graphviz==0.20.3
|
| 184 |
+
fastprogress==1.0.3
|
| 185 |
+
autograd==1.7.0
|
| 186 |
+
diffusers==0.32.2
|
| 187 |
+
langsmith==0.3.8
|
| 188 |
+
soupsieve==2.6
|
| 189 |
+
grpc-interceptor==0.15.4
|
| 190 |
+
greenlet==3.1.1
|
| 191 |
+
gymnasium==1.0.0
|
| 192 |
+
python-box==7.3.2
|
| 193 |
+
httpcore==1.0.7
|
| 194 |
+
googledrivedownloader==1.1.0
|
| 195 |
+
branca==0.8.1
|
| 196 |
+
itsdangerous==2.2.0
|
| 197 |
+
grpc-google-iam-v1==0.14.0
|
| 198 |
+
cons==0.4.6
|
| 199 |
+
opentelemetry-semantic-conventions==0.37b0
|
| 200 |
+
aiohappyeyeballs==2.4.6
|
| 201 |
+
requests-oauthlib==2.0.0
|
| 202 |
+
jieba==0.42.1
|
| 203 |
+
tensorboard==2.18.0
|
| 204 |
+
bleach==6.2.0
|
| 205 |
+
umf==0.9.1
|
| 206 |
+
tenacity==9.0.0
|
| 207 |
+
defusedxml==0.7.1
|
| 208 |
+
fastjsonschema==2.21.1
|
| 209 |
+
pylibcudf-cu12==24.12.0
|
| 210 |
+
markdown-it-py==3.0.0
|
| 211 |
+
et_xmlfile==2.0.0
|
| 212 |
+
typing_extensions==4.12.2
|
| 213 |
+
patsy==1.0.1
|
| 214 |
+
gast==0.6.0
|
| 215 |
+
cffi==1.17.1
|
| 216 |
+
ipyleaflet==0.19.2
|
| 217 |
+
imbalanced-learn==0.13.0
|
| 218 |
+
jupyterlab_widgets==3.0.13
|
| 219 |
+
PyDrive==1.3.1
|
| 220 |
+
intel-openmp==2025.0.4
|
| 221 |
+
albumentations==2.0.4
|
| 222 |
+
google-genai==0.8.0
|
| 223 |
+
locket==1.0.0
|
| 224 |
+
cryptography==43.0.3
|
| 225 |
+
oauthlib==3.2.2
|
| 226 |
+
panel==1.6.0
|
| 227 |
+
safetensors==0.5.2
|
| 228 |
+
iniconfig==2.0.0
|
| 229 |
+
imageio-ffmpeg==0.6.0
|
| 230 |
+
libclang==18.1.1
|
| 231 |
+
dask==2024.10.0
|
| 232 |
+
pexpect==4.9.0
|
| 233 |
+
nbclient==0.10.2
|
| 234 |
+
threadpoolctl==3.5.0
|
| 235 |
+
protobuf==4.25.6
|
| 236 |
+
google==2.0.3
|
| 237 |
+
googleapis-common-protos==1.66.0
|
| 238 |
+
colorlover==0.3.0
|
| 239 |
+
pandas-datareader==0.10.0
|
| 240 |
+
moviepy==1.0.3
|
| 241 |
+
sklearn-pandas==2.2.0
|
| 242 |
+
pydantic==2.10.6
|
| 243 |
+
webencodings==0.5.1
|
| 244 |
+
soundfile==0.13.1
|
| 245 |
+
pyshp==2.3.1
|
| 246 |
+
mpmath==1.3.0
|
| 247 |
+
ml-dtypes==0.4.1
|
| 248 |
+
tinycss2==1.4.0
|
| 249 |
+
geopandas==1.0.1
|
| 250 |
+
spacy-legacy==3.0.12
|
| 251 |
+
tzdata==2025.1
|
| 252 |
+
gin-config==0.5.0
|
| 253 |
+
mkl==2025.0.1
|
| 254 |
+
ipython==7.34.0
|
| 255 |
+
nvidia-nvtx-cu12==12.4.127
|
| 256 |
+
types-pytz==2025.1.0.20250204
|
| 257 |
+
promise==2.3
|
| 258 |
+
grpcio==1.70.0
|
| 259 |
+
chex==0.1.88
|
| 260 |
+
miniKanren==1.0.3
|
| 261 |
+
weasel==0.4.1
|
| 262 |
+
pyOpenSSL==24.2.1
|
| 263 |
+
google-crc32c==1.6.0
|
| 264 |
+
sniffio==1.3.1
|
| 265 |
+
nvidia-nvcomp-cu12==4.1.0.6
|
| 266 |
+
uritemplate==4.1.1
|
| 267 |
+
jsonpointer==3.0.0
|
| 268 |
+
ipyfilechooser==0.6.0
|
| 269 |
+
timm==1.0.14
|
| 270 |
+
google-cloud-pubsub==2.25.0
|
| 271 |
+
importlib_resources==6.5.2
|
| 272 |
+
holoviews==1.20.0
|
| 273 |
+
python-snappy==0.7.3
|
| 274 |
+
html5lib==1.1
|
| 275 |
+
scooby==0.10.0
|
| 276 |
+
google-cloud-firestore==2.20.0
|
| 277 |
+
ndindex==1.9.2
|
| 278 |
+
pyviz_comms==3.0.4
|
| 279 |
+
certifi==2025.1.31
|
| 280 |
+
pydotplus==2.0.2
|
| 281 |
+
google-api-python-client==2.160.0
|
| 282 |
+
charset-normalizer==3.4.1
|
| 283 |
+
google-spark-connect==0.5.2
|
| 284 |
+
prophet==1.1.6
|
| 285 |
+
pylibraft-cu12==24.12.0
|
| 286 |
+
pickleshare==0.7.5
|
| 287 |
+
qdldl==0.1.7.post5
|
| 288 |
+
google-cloud-spanner==3.51.0
|
| 289 |
+
torchvision==0.20.1+cu124
|
| 290 |
+
numpy==1.26.4
|
| 291 |
+
progressbar2==4.5.0
|
| 292 |
+
pygame==2.6.1
|
| 293 |
+
openpyxl==3.1.5
|
| 294 |
+
cupy-cuda12x==13.3.0
|
| 295 |
+
dm-tree==0.1.9
|
| 296 |
+
parsy==2.1
|
| 297 |
+
wordcloud==1.9.4
|
| 298 |
+
pymc==5.20.1
|
| 299 |
+
google-cloud-dataproc==5.16.0
|
| 300 |
+
kagglehub==0.3.7
|
| 301 |
+
keras-hub==0.18.1
|
| 302 |
+
pydata-google-auth==1.9.1
|
| 303 |
+
atpublic==4.1.0
|
| 304 |
+
propcache==0.2.1
|
| 305 |
+
zstandard==0.23.0
|
| 306 |
+
prettytable==3.14.0
|
| 307 |
+
param==2.2.0
|
| 308 |
+
google-cloud-functions==1.19.0
|
| 309 |
+
rsa==4.9
|
| 310 |
+
webcolors==24.11.1
|
| 311 |
+
google-cloud-storage==2.19.0
|
| 312 |
+
llvmlite==0.44.0
|
| 313 |
+
attrs==25.1.0
|
| 314 |
+
frozenlist==1.5.0
|
| 315 |
+
pyproj==3.7.0
|
| 316 |
+
pyspark==3.5.4
|
| 317 |
+
jsonschema-specifications==2024.10.1
|
| 318 |
+
jax==0.4.33
|
| 319 |
+
accelerate==1.3.0
|
| 320 |
+
tf-slim==1.1.0
|
| 321 |
+
langcodes==3.5.0
|
| 322 |
+
tensorflow-probability==0.25.0
|
| 323 |
+
pycocotools==2.0.8
|
| 324 |
+
geopy==2.4.1
|
| 325 |
+
polars==1.9.0
|
| 326 |
+
torchsummary==1.5.1
|
| 327 |
+
mlxtend==0.23.4
|
| 328 |
+
contourpy==1.3.1
|
| 329 |
+
firebase-admin==6.6.0
|
| 330 |
+
eerepr==0.1.0
|
| 331 |
+
jupyter_core==5.7.2
|
| 332 |
+
fonttools==4.56.0
|
| 333 |
+
imgaug==0.4.0
|
| 334 |
+
yarl==1.18.3
|
| 335 |
+
traitlets==5.7.1
|
| 336 |
+
opentelemetry-api==1.16.0
|
| 337 |
+
grpclib==0.4.7
|
| 338 |
+
websocket-client==1.8.0
|
| 339 |
+
py-cpuinfo==9.0.0
|
| 340 |
+
numba-cuda==0.0.17.1
|
| 341 |
+
nvidia-cuda-nvrtc-cu12==12.5.82
|
| 342 |
+
murmurhash==1.0.12
|
| 343 |
+
openai==1.61.1
|
| 344 |
+
easydict==1.13
|
| 345 |
+
sklearn-compat==0.1.3
|
| 346 |
+
notebook_shim==0.2.4
|
| 347 |
+
portpicker==1.5.2
|
| 348 |
+
gitdb==4.0.12
|
| 349 |
+
py4j==0.10.9.7
|
| 350 |
+
xarray==2025.1.2
|
| 351 |
+
hpack==4.1.0
|
| 352 |
+
cvxpy==1.6.0
|
| 353 |
+
libkvikio-cu12==24.12.1
|
| 354 |
+
requests-toolbelt==1.0.0
|
| 355 |
+
stanio==0.5.1
|
| 356 |
+
lazy_loader==0.4
|
| 357 |
+
jupyter-client==6.1.12
|
| 358 |
+
prometheus_client==0.21.1
|
| 359 |
+
wheel==0.45.1
|
| 360 |
+
community==1.0.0b1
|
| 361 |
+
hyperopt==0.2.7
|
| 362 |
+
mdit-py-plugins==0.4.2
|
| 363 |
+
tensorflow-text==2.18.1
|
| 364 |
+
h5py==3.12.1
|
| 365 |
+
id==1.5.0
|
| 366 |
+
requests==2.32.3
|
| 367 |
+
chardet==5.2.0
|
| 368 |
+
yellowbrick==1.5
|
| 369 |
+
partd==1.4.2
|
| 370 |
+
language_data==1.3.0
|
| 371 |
+
sigstore-rekor-types==0.0.18
|
| 372 |
+
transformers==4.48.3
|
| 373 |
+
einops==0.8.1
|
| 374 |
+
tensorstore==0.1.71
|
| 375 |
+
google-cloud-aiplatform==1.79.0
|
| 376 |
+
GitPython==3.1.44
|
| 377 |
+
pandas==2.2.2
|
| 378 |
+
humanize==4.11.0
|
| 379 |
+
anyio==3.7.1
|
| 380 |
+
google-auth-oauthlib==1.2.1
|
| 381 |
+
uc-micro-py==1.0.3
|
| 382 |
+
matplotlib-venn==1.1.1
|
| 383 |
+
httpx==0.28.1
|
| 384 |
+
sentence-transformers==3.4.1
|
| 385 |
+
spanner-graph-notebook==1.0.9
|
| 386 |
+
ipyevents==2.0.2
|
| 387 |
+
langchain-text-splitters==0.3.6
|
| 388 |
+
jaxlib==0.4.33
|
| 389 |
+
bigframes==1.36.0
|
| 390 |
+
tensorflow-metadata==1.16.1
|
| 391 |
+
ipytree==0.2.2
|
| 392 |
+
wcwidth==0.2.13
|
| 393 |
+
argon2-cffi-bindings==21.2.0
|
| 394 |
+
nvtx==0.2.10
|
| 395 |
+
colour==0.1.5
|
| 396 |
+
editdistance==0.8.1
|
| 397 |
+
natsort==8.4.0
|
| 398 |
+
Jinja2==3.1.5
|
| 399 |
+
ibis-framework==9.2.0
|
| 400 |
+
alabaster==1.0.0
|
| 401 |
+
betterproto==2.0.0b6
|
| 402 |
+
linkify-it-py==2.0.3
|
| 403 |
+
typeguard==4.4.1
|
| 404 |
+
google-cloud-bigquery==3.25.0
|
| 405 |
+
triton==3.1.0
|
| 406 |
+
nltk==3.9.1
|
| 407 |
+
shapely==2.0.7
|
| 408 |
+
blosc2==3.0.0
|
| 409 |
+
peewee==3.17.9
|
| 410 |
+
nbconvert==7.16.6
|
| 411 |
+
glob2==0.7
|
| 412 |
+
ipywidgets==7.7.1
|
| 413 |
+
h11==0.14.0
|
| 414 |
+
Deprecated==1.2.18
|
| 415 |
+
pyarrow==17.0.0
|
| 416 |
+
rich==13.9.4
|
| 417 |
+
toml==0.10.2
|
| 418 |
+
marisa-trie==1.2.1
|
| 419 |
+
nvidia-cuda-runtime-cu12==12.5.82
|
| 420 |
+
packaging==24.2
|
| 421 |
+
parso==0.8.4
|
| 422 |
+
wandb==0.19.6
|
| 423 |
+
missingno==0.5.2
|
| 424 |
+
etils==1.12.0
|
| 425 |
+
langchain==0.3.18
|
| 426 |
+
pymystem3==0.2.0
|
| 427 |
+
gspread-dataframe==4.0.0
|
| 428 |
+
mizani==0.13.1
|
| 429 |
+
earthengine-api==1.5.2
|
| 430 |
+
bokeh==3.6.3
|
| 431 |
+
idna==3.10
|
| 432 |
+
gensim==4.3.3
|
| 433 |
+
cramjam==2.9.1
|
| 434 |
+
aiosignal==1.3.2
|
| 435 |
+
narwhals==1.26.0
|
| 436 |
+
cymem==2.0.11
|
| 437 |
+
cvxopt==1.3.2
|
| 438 |
+
psutil==5.9.5
|
| 439 |
+
tensorflow-io-gcs-filesystem==0.37.1
|
| 440 |
+
sympy==1.13.1
|
| 441 |
+
blis==0.7.11
|
| 442 |
+
tifffile==2025.1.10
|
| 443 |
+
hyperframe==6.1.0
|
| 444 |
+
pycparser==2.22
|
| 445 |
+
SQLAlchemy==2.0.38
|
| 446 |
+
db-dtypes==1.4.1
|
| 447 |
+
tbb==2022.0.0
|
| 448 |
+
pytz==2025.1
|
| 449 |
+
geocoder==1.38.1
|
| 450 |
+
Cython==3.0.12
|
| 451 |
+
jsonpatch==1.33
|
| 452 |
+
astunparse==1.6.3
|
| 453 |
+
pyogrio==0.10.0
|
| 454 |
+
inflect==7.5.0
|
| 455 |
+
tweepy==4.15.0
|
| 456 |
+
jiter==0.8.2
|
| 457 |
+
multipledispatch==1.0.0
|
| 458 |
+
google-cloud-resource-manager==1.14.0
|
| 459 |
+
notebook==6.5.5
|
| 460 |
+
dopamine_rl==4.1.2
|
| 461 |
+
librosa==0.10.2.post1
|
| 462 |
+
slicer==0.0.8
|
| 463 |
+
sqlglot==25.6.1
|
| 464 |
+
ipyparallel==8.8.0
|
| 465 |
+
tornado==6.4.2
|
| 466 |
+
cyipopt==1.5.0
|
| 467 |
+
more-itertools==10.6.0
|
| 468 |
+
holidays==0.66
|
| 469 |
+
tensorflow==2.18.0
|
| 470 |
+
proto-plus==1.26.0
|
| 471 |
+
albucore==0.0.23
|
| 472 |
+
terminado==0.18.1
|
| 473 |
+
jupyter-console==6.1.0
|
| 474 |
+
google-cloud-iam==2.17.0
|
| 475 |
+
docutils==0.21.2
|
| 476 |
+
lightgbm==4.5.0
|
| 477 |
+
cudf-cu12==24.12.0
|
| 478 |
+
debugpy==1.8.0
|
| 479 |
+
pyerfa==2.0.1.5
|
| 480 |
+
nx-cugraph-cu12==24.12.0
|
| 481 |
+
fsspec==2024.10.0
|
| 482 |
+
clarabel==0.10.0
|
| 483 |
+
tabulate==0.9.0
|
| 484 |
+
rmm-cu12==24.12.1
|
| 485 |
+
peft==0.14.0
|
| 486 |
+
fastcore==1.7.29
|
| 487 |
+
jsonschema==4.23.0
|
| 488 |
+
backcall==0.2.0
|
| 489 |
+
pytest==8.3.4
|
| 490 |
+
Werkzeug==3.1.3
|
| 491 |
+
nvidia-cudnn-cu12==9.3.0.75
|
| 492 |
+
model-signing==0.2.0
|
| 493 |
+
blinker==1.9.0
|
| 494 |
+
imutils==0.5.4
|
| 495 |
+
audioread==3.0.1
|
| 496 |
+
traittypes==0.2.1
|
| 497 |
+
scipy==1.13.1
|
| 498 |
+
google-cloud-translate==3.19.0
|
| 499 |
+
gym-notices==0.0.8
|
| 500 |
+
xyzservices==2025.1.0
|
| 501 |
+
h5netcdf==1.5.0
|
| 502 |
+
in-toto-attestation==0.9.3
|
| 503 |
+
rfc3161-client==0.1.2
|
| 504 |
+
pyasn1_modules==0.4.1
|
| 505 |
+
widgetsnbextension==3.6.10
|
| 506 |
+
cuda-python==12.6.0
|
| 507 |
+
sphinxcontrib-htmlhelp==2.1.0
|
| 508 |
+
nvidia-cusparse-cu12==12.5.1.3
|
| 509 |
+
annotated-types==0.7.0
|
| 510 |
+
cloudpathlib==0.20.0
|
| 511 |
+
jellyfish==1.1.0
|
| 512 |
+
gdown==5.2.0
|
| 513 |
+
msgpack==1.1.0
|
| 514 |
+
pooch==1.8.2
|
| 515 |
+
sigstore==3.6.1
|
| 516 |
+
beautifulsoup4==4.13.3
|
| 517 |
+
cufflinks==0.17.3
|
| 518 |
+
h2==4.2.0
|
| 519 |
+
bqplot==0.12.44
|
| 520 |
+
numba==0.61.0
|
| 521 |
+
shellingham==1.5.4
|
| 522 |
+
Bottleneck==1.4.2
|
| 523 |
+
mdurl==0.1.2
|
| 524 |
+
soxr==0.5.0.post1
|
| 525 |
+
confection==0.1.5
|
| 526 |
+
securesystemslib==1.2.0
|
| 527 |
+
ale-py==0.10.1
|
| 528 |
+
google-cloud-language==2.16.0
|
| 529 |
+
osqp==0.6.7.post3
|
| 530 |
+
gspread==6.1.4
|
| 531 |
+
treescope==0.1.8
|
| 532 |
+
frozendict==2.4.6
|
| 533 |
+
nbclassic==1.2.0
|
| 534 |
+
tqdm==4.67.1
|
| 535 |
+
websockets==14.2
|
| 536 |
+
pydot==3.0.4
|
| 537 |
+
array_record==0.6.0
|
| 538 |
+
PyOpenGL==3.1.9
|
| 539 |
+
google-generativeai==0.8.4
|
| 540 |
+
httpimport==1.4.0
|
| 541 |
+
colorcet==3.1.0
|
| 542 |
+
tf_keras==2.18.0
|
| 543 |
+
scikit-image==0.25.1
|
| 544 |
+
vega-datasets==0.9.0
|
| 545 |
+
PyYAML==6.0.2
|
| 546 |
+
proglog==0.1.10
|
| 547 |
+
yfinance==0.2.52
|
| 548 |
+
ipykernel==5.5.6
|
| 549 |
+
tzlocal==5.2
|
| 550 |
+
filelock==3.17.0
|
| 551 |
+
Farama-Notifications==0.0.4
|
| 552 |
+
spacy==3.7.5
|
| 553 |
+
Flask==3.1.0
|
| 554 |
+
nbformat==5.10.4
|
| 555 |
+
google-cloud-bigtable==2.28.1
|
| 556 |
+
nvidia-cusolver-cu12==11.6.3.83
|
| 557 |
+
fastdownload==0.0.7
|
| 558 |
+
nvidia-cufft-cu12==11.2.3.61
|
| 559 |
+
oauth2client==4.1.3
|
| 560 |
+
nvidia-nccl-cu12==2.21.5
|
| 561 |
+
libcudf-cu12==24.12.0
|
| 562 |
+
tables==3.10.2
|
| 563 |
+
google-resumable-media==2.7.2
|
| 564 |
+
jax-cuda12-pjrt==0.4.33
|
| 565 |
+
xarray-einstats==0.8.0
|
| 566 |
+
sqlparse==0.5.3
|
| 567 |
+
tokenizers==0.21.0
|
| 568 |
+
ratelim==0.1.6
|
| 569 |
+
sphinxcontrib-jsmath==1.0.1
|
| 570 |
+
ipython-genutils==0.2.0
|
| 571 |
+
seaborn==0.13.2
|
| 572 |
+
pandocfilters==1.5.1
|
| 573 |
+
python-apt==0.0.0
|
| 574 |
+
requirements-parser==0.9.0
|
| 575 |
+
pip==24.1.2
|
| 576 |
+
setuptools==75.1.0
|
| 577 |
+
types-setuptools==75.8.0.20250210
|
| 578 |
+
dbus-python==1.2.18
|
| 579 |
+
SecretStorage==3.3.1
|
| 580 |
+
oauthlib==3.2.0
|
| 581 |
+
httplib2==0.20.2
|
| 582 |
+
importlib-metadata==4.6.4
|
| 583 |
+
PyJWT==2.3.0
|
| 584 |
+
keyring==23.5.0
|
| 585 |
+
zipp==1.0.0
|
| 586 |
+
pyparsing==2.4.7
|
| 587 |
+
distro==1.7.0
|
| 588 |
+
more-itertools==8.10.0
|
| 589 |
+
python-apt==2.4.0+ubuntu4
|
| 590 |
+
launchpadlib==1.10.16
|
| 591 |
+
six==1.16.0
|
| 592 |
+
blinker==1.4
|
| 593 |
+
jeepney==0.7.1
|
| 594 |
+
PyGObject==3.42.1
|
| 595 |
+
lazr.uri==1.0.6
|
| 596 |
+
lazr.restfulclient==0.14.4
|
| 597 |
+
wadllib==1.3.6
|
| 598 |
+
cryptography==3.4.8
|
| 599 |
+
importlib_metadata==8.0.0
|
| 600 |
+
backports.tarfile==1.2.0
|
| 601 |
+
typeguard==4.3.0
|
| 602 |
+
packaging==24.1
|
| 603 |
+
typing_extensions==4.12.2
|
| 604 |
+
jaraco.collections==5.1.0
|
| 605 |
+
autocommand==2.2.2
|
| 606 |
+
wheel==0.43.0
|
| 607 |
+
platformdirs==4.2.2
|
| 608 |
+
tomli==2.0.1
|
| 609 |
+
importlib_resources==6.4.0
|
| 610 |
+
jaraco.functools==4.0.1
|
| 611 |
+
jaraco.context==5.3.0
|
| 612 |
+
zipp==3.19.2
|
| 613 |
+
more-itertools==10.3.0
|
| 614 |
+
jaraco.text==3.12.1
|
| 615 |
+
inflect==7.3.1
|
wandb/latest-run/files/wandb-metadata.json
ADDED
|
@@ -0,0 +1,37 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"os": "Linux-6.1.85+-x86_64-with-glibc2.35",
|
| 3 |
+
"python": "CPython 3.11.11",
|
| 4 |
+
"startedAt": "2025-02-16T11:37:13.201201Z",
|
| 5 |
+
"program": "DiagnosisPredictor.ipynb",
|
| 6 |
+
"email": "drsyedfaizan1987@gmail.com",
|
| 7 |
+
"root": "/content",
|
| 8 |
+
"host": "697d7dc81256",
|
| 9 |
+
"executable": "/usr/bin/python3",
|
| 10 |
+
"colab": "https://colab.research.google.com/notebook#fileId=1H0jGicwNpMGoUFXTDmKWpvq0U2xvekLG",
|
| 11 |
+
"cpu_count": 6,
|
| 12 |
+
"cpu_count_logical": 12,
|
| 13 |
+
"gpu": "NVIDIA A100-SXM4-40GB",
|
| 14 |
+
"gpu_count": 1,
|
| 15 |
+
"disk": {
|
| 16 |
+
"/": {
|
| 17 |
+
"total": "120942624768",
|
| 18 |
+
"used": "31777460224"
|
| 19 |
+
}
|
| 20 |
+
},
|
| 21 |
+
"memory": {
|
| 22 |
+
"total": "89632796672"
|
| 23 |
+
},
|
| 24 |
+
"cpu": {
|
| 25 |
+
"count": 6,
|
| 26 |
+
"countLogical": 12
|
| 27 |
+
},
|
| 28 |
+
"gpu_nvidia": [
|
| 29 |
+
{
|
| 30 |
+
"name": "NVIDIA A100-SXM4-40GB",
|
| 31 |
+
"memoryTotal": "42949672960",
|
| 32 |
+
"cudaCores": 6912,
|
| 33 |
+
"architecture": "Ampere"
|
| 34 |
+
}
|
| 35 |
+
],
|
| 36 |
+
"cudaVersion": "12.4"
|
| 37 |
+
}
|
wandb/latest-run/logs/debug-core.log
ADDED
|
@@ -0,0 +1,6 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{"time":"2025-02-16T11:37:13.142848876Z","level":"INFO","msg":"main: starting server","port-filename":"/tmp/tmpijry80e6/port-424.txt","pid":424,"log-level":0,"disable-analytics":false,"shutdown-on-parent-exit":false}
|
| 2 |
+
{"time":"2025-02-16T11:37:13.14727149Z","level":"INFO","msg":"Will exit if parent process dies.","ppid":424}
|
| 3 |
+
{"time":"2025-02-16T11:37:13.147383449Z","level":"INFO","msg":"server is running","addr":{"IP":"127.0.0.1","Port":43451,"Zone":""}}
|
| 4 |
+
{"time":"2025-02-16T11:37:13.192212515Z","level":"INFO","msg":"connection: ManageConnectionData: new connection created","id":"127.0.0.1:52898"}
|
| 5 |
+
{"time":"2025-02-16T11:37:13.202961759Z","level":"INFO","msg":"handleInformInit: received","streamId":"ypm5ne5j","id":"127.0.0.1:52898"}
|
| 6 |
+
{"time":"2025-02-16T11:37:13.310348007Z","level":"INFO","msg":"handleInformInit: stream started","streamId":"ypm5ne5j","id":"127.0.0.1:52898"}
|
wandb/latest-run/logs/debug-internal.log
ADDED
|
@@ -0,0 +1,59 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{"time":"2025-02-16T11:37:13.203113118Z","level":"INFO","msg":"stream: starting","core version":"0.19.6","symlink path":"/content/wandb/run-20250216_113712-ypm5ne5j/logs/debug-core.log"}
|
| 2 |
+
{"time":"2025-02-16T11:37:13.310296735Z","level":"INFO","msg":"created new stream","id":"ypm5ne5j"}
|
| 3 |
+
{"time":"2025-02-16T11:37:13.310341207Z","level":"INFO","msg":"stream: started","id":"ypm5ne5j"}
|
| 4 |
+
{"time":"2025-02-16T11:37:13.310368478Z","level":"INFO","msg":"writer: Do: started","stream_id":"ypm5ne5j"}
|
| 5 |
+
{"time":"2025-02-16T11:37:13.310522121Z","level":"INFO","msg":"handler: started","stream_id":"ypm5ne5j"}
|
| 6 |
+
{"time":"2025-02-16T11:37:13.310555821Z","level":"INFO","msg":"sender: started","stream_id":"ypm5ne5j"}
|
| 7 |
+
{"time":"2025-02-16T11:37:13.57563722Z","level":"INFO","msg":"Starting system monitor"}
|
| 8 |
+
{"time":"2025-02-16T11:38:48.230013602Z","level":"INFO","msg":"Pausing system monitor"}
|
| 9 |
+
{"time":"2025-02-16T11:39:39.363077937Z","level":"INFO","msg":"Resuming system monitor"}
|
| 10 |
+
{"time":"2025-02-16T11:39:41.894171188Z","level":"INFO","msg":"Pausing system monitor"}
|
| 11 |
+
{"time":"2025-02-16T11:39:54.593959928Z","level":"INFO","msg":"Resuming system monitor"}
|
| 12 |
+
{"time":"2025-02-16T11:39:56.811973137Z","level":"INFO","msg":"Pausing system monitor"}
|
| 13 |
+
{"time":"2025-02-16T11:41:06.824737344Z","level":"INFO","msg":"Resuming system monitor"}
|
| 14 |
+
{"time":"2025-02-16T11:41:07.752589846Z","level":"INFO","msg":"Pausing system monitor"}
|
| 15 |
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{"time":"2025-02-16T11:42:12.192009247Z","level":"INFO","msg":"Resuming system monitor"}
|
| 16 |
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{"time":"2025-02-16T11:42:12.283338284Z","level":"INFO","msg":"Pausing system monitor"}
|
| 17 |
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{"time":"2025-02-16T11:42:41.350463962Z","level":"INFO","msg":"Resuming system monitor"}
|
| 18 |
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{"time":"2025-02-16T11:42:41.351631132Z","level":"INFO","msg":"Pausing system monitor"}
|
| 19 |
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{"time":"2025-02-16T11:53:23.916312558Z","level":"INFO","msg":"Resuming system monitor"}
|
| 20 |
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{"time":"2025-02-16T11:53:23.959638233Z","level":"INFO","msg":"Pausing system monitor"}
|
| 21 |
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{"time":"2025-02-16T11:54:40.152995725Z","level":"INFO","msg":"Resuming system monitor"}
|
| 22 |
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{"time":"2025-02-16T11:54:43.075039915Z","level":"INFO","msg":"Pausing system monitor"}
|
| 23 |
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{"time":"2025-02-16T11:54:47.046873779Z","level":"INFO","msg":"Resuming system monitor"}
|
| 24 |
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{"time":"2025-02-16T11:54:47.451262319Z","level":"INFO","msg":"Pausing system monitor"}
|
| 25 |
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{"time":"2025-02-16T11:55:29.495399044Z","level":"INFO","msg":"Resuming system monitor"}
|
| 26 |
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{"time":"2025-02-16T11:55:33.323768484Z","level":"INFO","msg":"Pausing system monitor"}
|
| 27 |
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{"time":"2025-02-16T11:55:43.660000555Z","level":"INFO","msg":"Resuming system monitor"}
|
| 28 |
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{"time":"2025-02-16T11:55:45.972122336Z","level":"INFO","msg":"Pausing system monitor"}
|
| 29 |
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{"time":"2025-02-16T11:55:51.874951337Z","level":"INFO","msg":"Resuming system monitor"}
|
| 30 |
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{"time":"2025-02-16T11:55:51.924534755Z","level":"INFO","msg":"Pausing system monitor"}
|
| 31 |
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{"time":"2025-02-16T11:56:38.941974077Z","level":"INFO","msg":"Resuming system monitor"}
|
| 32 |
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{"time":"2025-02-16T11:56:39.033349828Z","level":"INFO","msg":"Pausing system monitor"}
|
| 33 |
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{"time":"2025-02-16T11:57:37.134643021Z","level":"INFO","msg":"Resuming system monitor"}
|
| 34 |
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{"time":"2025-02-16T11:57:37.174702019Z","level":"INFO","msg":"Pausing system monitor"}
|
| 35 |
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{"time":"2025-02-16T11:57:56.326580512Z","level":"INFO","msg":"Resuming system monitor"}
|
| 36 |
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{"time":"2025-02-16T11:57:56.366694865Z","level":"INFO","msg":"Pausing system monitor"}
|
| 37 |
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{"time":"2025-02-16T11:58:22.002434393Z","level":"INFO","msg":"Resuming system monitor"}
|
| 38 |
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{"time":"2025-02-16T11:58:22.005014763Z","level":"INFO","msg":"Pausing system monitor"}
|
| 39 |
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{"time":"2025-02-16T11:58:46.666815014Z","level":"INFO","msg":"Resuming system monitor"}
|
| 40 |
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{"time":"2025-02-16T11:58:46.707699134Z","level":"INFO","msg":"Pausing system monitor"}
|
| 41 |
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{"time":"2025-02-16T11:59:06.144104823Z","level":"INFO","msg":"Resuming system monitor"}
|
| 42 |
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{"time":"2025-02-16T11:59:06.184688106Z","level":"INFO","msg":"Pausing system monitor"}
|
| 43 |
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{"time":"2025-02-16T11:59:33.234535747Z","level":"INFO","msg":"Resuming system monitor"}
|
| 44 |
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{"time":"2025-02-16T11:59:33.274699837Z","level":"INFO","msg":"Pausing system monitor"}
|
| 45 |
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{"time":"2025-02-16T12:00:42.093946696Z","level":"INFO","msg":"Resuming system monitor"}
|
| 46 |
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{"time":"2025-02-16T12:00:44.510320305Z","level":"INFO","msg":"Pausing system monitor"}
|
| 47 |
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{"time":"2025-02-16T12:00:46.116547873Z","level":"INFO","msg":"Resuming system monitor"}
|
| 48 |
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{"time":"2025-02-16T12:00:46.137061562Z","level":"INFO","msg":"Pausing system monitor"}
|
| 49 |
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{"time":"2025-02-16T12:03:44.000976091Z","level":"INFO","msg":"Resuming system monitor"}
|
| 50 |
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{"time":"2025-02-16T12:03:46.418849162Z","level":"INFO","msg":"Pausing system monitor"}
|
| 51 |
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{"time":"2025-02-16T12:07:03.642233368Z","level":"INFO","msg":"Resuming system monitor"}
|
| 52 |
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{"time":"2025-02-16T12:07:03.664948521Z","level":"INFO","msg":"Pausing system monitor"}
|
| 53 |
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{"time":"2025-02-16T12:08:06.937381173Z","level":"INFO","msg":"Resuming system monitor"}
|
| 54 |
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{"time":"2025-02-16T12:08:09.151566112Z","level":"INFO","msg":"Pausing system monitor"}
|
| 55 |
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{"time":"2025-02-16T12:08:13.875342495Z","level":"INFO","msg":"Resuming system monitor"}
|
| 56 |
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{"time":"2025-02-16T12:08:13.901174957Z","level":"INFO","msg":"Pausing system monitor"}
|
| 57 |
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{"time":"2025-02-16T12:08:18.486956036Z","level":"INFO","msg":"Resuming system monitor"}
|
| 58 |
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{"time":"2025-02-16T12:08:19.959282115Z","level":"INFO","msg":"Pausing system monitor"}
|
| 59 |
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{"time":"2025-02-16T12:17:23.135555028Z","level":"INFO","msg":"Resuming system monitor"}
|
wandb/latest-run/logs/debug.log
ADDED
|
@@ -0,0 +1,105 @@
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|
|
|
| 1 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_setup.py:_flush():68] Current SDK version is 0.19.6
|
| 2 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_setup.py:_flush():68] Configure stats pid to 424
|
| 3 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_setup.py:_flush():68] Loading settings from /root/.config/wandb/settings
|
| 4 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_setup.py:_flush():68] Loading settings from /content/wandb/settings
|
| 5 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_setup.py:_flush():68] Loading settings from environment variables
|
| 6 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_init.py:setup_run_log_directory():637] Logging user logs to /content/wandb/run-20250216_113712-ypm5ne5j/logs/debug.log
|
| 7 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_init.py:setup_run_log_directory():638] Logging internal logs to /content/wandb/run-20250216_113712-ypm5ne5j/logs/debug-internal.log
|
| 8 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_init.py:monkeypatch_ipython():589] configuring jupyter hooks <wandb.sdk.wandb_init._WandbInit object at 0x7b854f1c3f90>
|
| 9 |
+
2025-02-16 11:37:12,773 INFO MainThread:424 [wandb_init.py:init():756] calling init triggers
|
| 10 |
+
2025-02-16 11:37:12,773 INFO MainThread:424 [wandb_init.py:init():761] wandb.init called with sweep_config: {}
|
| 11 |
+
config: {'_wandb': {}}
|
| 12 |
+
2025-02-16 11:37:12,773 INFO MainThread:424 [wandb_init.py:init():789] starting backend
|
| 13 |
+
2025-02-16 11:37:13,192 INFO MainThread:424 [wandb_init.py:init():793] sending inform_init request
|
| 14 |
+
2025-02-16 11:37:13,200 INFO MainThread:424 [backend.py:_multiprocessing_setup():97] multiprocessing start_methods=fork,spawn,forkserver, using: spawn
|
| 15 |
+
2025-02-16 11:37:13,201 INFO MainThread:424 [wandb_init.py:init():808] backend started and connected
|
| 16 |
+
2025-02-16 11:37:13,207 INFO MainThread:424 [wandb_run.py:_label_probe_notebook():1196] probe notebook
|
| 17 |
+
2025-02-16 11:37:13,461 INFO MainThread:424 [wandb_init.py:init():901] updated telemetry
|
| 18 |
+
2025-02-16 11:37:13,462 INFO MainThread:424 [wandb_init.py:init():936] communicating run to backend with 90.0 second timeout
|
| 19 |
+
2025-02-16 11:37:13,572 INFO MainThread:424 [wandb_init.py:init():994] starting run threads in backend
|
| 20 |
+
2025-02-16 11:37:13,961 INFO MainThread:424 [wandb_run.py:_console_start():2385] atexit reg
|
| 21 |
+
2025-02-16 11:37:13,961 INFO MainThread:424 [wandb_run.py:_redirect():2235] redirect: wrap_raw
|
| 22 |
+
2025-02-16 11:37:13,961 INFO MainThread:424 [wandb_run.py:_redirect():2300] Wrapping output streams.
|
| 23 |
+
2025-02-16 11:37:13,962 INFO MainThread:424 [wandb_run.py:_redirect():2325] Redirects installed.
|
| 24 |
+
2025-02-16 11:37:13,967 INFO MainThread:424 [wandb_init.py:init():1036] run started, returning control to user process
|
| 25 |
+
2025-02-16 11:37:13,970 INFO MainThread:424 [wandb_run.py:_config_callback():1253] config_cb None None {'return_dict': True, 'output_hidden_states': False, 'output_attentions': False, 'torchscript': False, 'torch_dtype': None, 'use_bfloat16': False, 'tf_legacy_loss': False, 'pruned_heads': {}, 'tie_word_embeddings': True, 'chunk_size_feed_forward': 0, 'is_encoder_decoder': False, 'is_decoder': False, 'cross_attention_hidden_size': None, 'add_cross_attention': False, 'tie_encoder_decoder': False, 'max_length': 20, 'min_length': 0, 'do_sample': False, 'early_stopping': False, 'num_beams': 1, 'num_beam_groups': 1, 'diversity_penalty': 0.0, 'temperature': 1.0, 'top_k': 50, 'top_p': 1.0, 'typical_p': 1.0, 'repetition_penalty': 1.0, 'length_penalty': 1.0, 'no_repeat_ngram_size': 0, 'encoder_no_repeat_ngram_size': 0, 'bad_words_ids': None, 'num_return_sequences': 1, 'output_scores': False, 'return_dict_in_generate': False, 'forced_bos_token_id': None, 'forced_eos_token_id': None, 'remove_invalid_values': False, 'exponential_decay_length_penalty': None, 'suppress_tokens': None, 'begin_suppress_tokens': None, 'architectures': ['BertForMaskedLM'], 'finetuning_task': None, 'id2label': {0: 'LABEL_0', 1: 'LABEL_1', 2: 'LABEL_2', 3: 'LABEL_3', 4: 'LABEL_4', 5: 'LABEL_5', 6: 'LABEL_6', 7: 'LABEL_7', 8: 'LABEL_8', 9: 'LABEL_9', 10: 'LABEL_10', 11: 'LABEL_11', 12: 'LABEL_12', 13: 'LABEL_13', 14: 'LABEL_14', 15: 'LABEL_15', 16: 'LABEL_16', 17: 'LABEL_17', 18: 'LABEL_18', 19: 'LABEL_19'}, 'label2id': {'LABEL_0': 0, 'LABEL_1': 1, 'LABEL_2': 2, 'LABEL_3': 3, 'LABEL_4': 4, 'LABEL_5': 5, 'LABEL_6': 6, 'LABEL_7': 7, 'LABEL_8': 8, 'LABEL_9': 9, 'LABEL_10': 10, 'LABEL_11': 11, 'LABEL_12': 12, 'LABEL_13': 13, 'LABEL_14': 14, 'LABEL_15': 15, 'LABEL_16': 16, 'LABEL_17': 17, 'LABEL_18': 18, 'LABEL_19': 19}, 'tokenizer_class': None, 'prefix': None, 'bos_token_id': None, 'pad_token_id': 0, 'eos_token_id': None, 'sep_token_id': None, 'decoder_start_token_id': None, 'task_specific_params': None, 'problem_type': None, '_name_or_path': 'monologg/biobert_v1.1_pubmed', '_attn_implementation_autoset': True, 'transformers_version': '4.48.3', 'model_type': 'bert', 'vocab_size': 28996, 'hidden_size': 768, 'num_hidden_layers': 12, 'num_attention_heads': 12, 'hidden_act': 'gelu', 'intermediate_size': 3072, 'hidden_dropout_prob': 0.1, 'attention_probs_dropout_prob': 0.1, 'max_position_embeddings': 512, 'type_vocab_size': 2, 'initializer_range': 0.02, 'layer_norm_eps': 1e-12, 'position_embedding_type': 'absolute', 'use_cache': True, 'classifier_dropout': None, 'output_dir': './results', 'overwrite_output_dir': False, 'do_train': False, 'do_eval': True, 'do_predict': False, 'eval_strategy': 'epoch', 'prediction_loss_only': False, 'per_device_train_batch_size': 16, 'per_device_eval_batch_size': 16, 'per_gpu_train_batch_size': None, 'per_gpu_eval_batch_size': None, 'gradient_accumulation_steps': 2, 'eval_accumulation_steps': None, 'eval_delay': 0, 'torch_empty_cache_steps': None, 'learning_rate': 2e-05, 'weight_decay': 0.01, 'adam_beta1': 0.9, 'adam_beta2': 0.999, 'adam_epsilon': 1e-08, 'max_grad_norm': 1.0, 'num_train_epochs': 5, 'max_steps': -1, 'lr_scheduler_type': 'linear', 'lr_scheduler_kwargs': {}, 'warmup_ratio': 0.0, 'warmup_steps': 500, 'log_level': 'passive', 'log_level_replica': 'warning', 'log_on_each_node': True, 'logging_dir': './logs', 'logging_strategy': 'steps', 'logging_first_step': False, 'logging_steps': 10, 'logging_nan_inf_filter': True, 'save_strategy': 'epoch', 'save_steps': 500, 'save_total_limit': 3, 'save_safetensors': True, 'save_on_each_node': False, 'save_only_model': False, 'restore_callback_states_from_checkpoint': False, 'no_cuda': False, 'use_cpu': False, 'use_mps_device': False, 'seed': 42, 'data_seed': None, 'jit_mode_eval': False, 'use_ipex': False, 'bf16': False, 'fp16': False, 'fp16_opt_level': 'O1', 'half_precision_backend': 'auto', 'bf16_full_eval': False, 'fp16_full_eval': False, 'tf32': None, 'local_rank': 0, 'ddp_backend': None, 'tpu_num_cores': None, 'tpu_metrics_debug': False, 'debug': [], 'dataloader_drop_last': False, 'eval_steps': None, 'dataloader_num_workers': 0, 'dataloader_prefetch_factor': None, 'past_index': -1, 'run_name': './results', 'disable_tqdm': False, 'remove_unused_columns': True, 'label_names': None, 'load_best_model_at_end': True, 'metric_for_best_model': 'eval_loss', 'greater_is_better': False, 'ignore_data_skip': False, 'fsdp': [], 'fsdp_min_num_params': 0, 'fsdp_config': {'min_num_params': 0, 'xla': False, 'xla_fsdp_v2': False, 'xla_fsdp_grad_ckpt': False}, 'fsdp_transformer_layer_cls_to_wrap': None, 'accelerator_config': {'split_batches': False, 'dispatch_batches': None, 'even_batches': True, 'use_seedable_sampler': True, 'non_blocking': False, 'gradient_accumulation_kwargs': None}, 'deepspeed': None, 'label_smoothing_factor': 0.0, 'optim': 'adamw_torch', 'optim_args': None, 'adafactor': False, 'group_by_length': False, 'length_column_name': 'length', 'report_to': ['tensorboard', 'wandb'], 'ddp_find_unused_parameters': None, 'ddp_bucket_cap_mb': None, 'ddp_broadcast_buffers': None, 'dataloader_pin_memory': True, 'dataloader_persistent_workers': False, 'skip_memory_metrics': True, 'use_legacy_prediction_loop': False, 'push_to_hub': False, 'resume_from_checkpoint': None, 'hub_model_id': None, 'hub_strategy': 'every_save', 'hub_token': '<HUB_TOKEN>', 'hub_private_repo': None, 'hub_always_push': False, 'gradient_checkpointing': False, 'gradient_checkpointing_kwargs': None, 'include_inputs_for_metrics': False, 'include_for_metrics': [], 'eval_do_concat_batches': True, 'fp16_backend': 'auto', 'evaluation_strategy': 'epoch', 'push_to_hub_model_id': None, 'push_to_hub_organization': None, 'push_to_hub_token': '<PUSH_TO_HUB_TOKEN>', 'mp_parameters': '', 'auto_find_batch_size': False, 'full_determinism': False, 'torchdynamo': None, 'ray_scope': 'last', 'ddp_timeout': 1800, 'torch_compile': False, 'torch_compile_backend': None, 'torch_compile_mode': None, 'dispatch_batches': None, 'split_batches': None, 'include_tokens_per_second': False, 'include_num_input_tokens_seen': False, 'neftune_noise_alpha': None, 'optim_target_modules': None, 'batch_eval_metrics': False, 'eval_on_start': False, 'use_liger_kernel': False, 'eval_use_gather_object': False, 'average_tokens_across_devices': False}
|
| 26 |
+
2025-02-16 11:37:13,973 INFO MainThread:424 [wandb_config.py:__setitem__():154] config set model/num_parameters = 108325652 - <bound method Run._config_callback of <wandb.sdk.wandb_run.Run object at 0x7b854e7497d0>>
|
| 27 |
+
2025-02-16 11:37:13,973 INFO MainThread:424 [wandb_run.py:_config_callback():1253] config_cb model/num_parameters 108325652 None
|
| 28 |
+
2025-02-16 11:38:48,229 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 29 |
+
2025-02-16 11:38:48,229 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 30 |
+
2025-02-16 11:39:39,362 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 31 |
+
2025-02-16 11:39:41,893 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 32 |
+
2025-02-16 11:39:41,893 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 33 |
+
2025-02-16 11:39:54,593 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 34 |
+
2025-02-16 11:39:56,811 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 35 |
+
2025-02-16 11:39:56,811 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 36 |
+
2025-02-16 11:41:06,824 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 37 |
+
2025-02-16 11:41:07,752 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 38 |
+
2025-02-16 11:41:07,752 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 39 |
+
2025-02-16 11:42:12,191 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 40 |
+
2025-02-16 11:42:12,282 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 41 |
+
2025-02-16 11:42:12,283 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 42 |
+
2025-02-16 11:42:41,349 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 43 |
+
2025-02-16 11:42:41,351 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 44 |
+
2025-02-16 11:42:41,351 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 45 |
+
2025-02-16 11:53:23,915 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 46 |
+
2025-02-16 11:53:23,959 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 47 |
+
2025-02-16 11:53:23,959 INFO MainThread:424 [wandb_init.py:_pause_backend():554] pausing backend
|
| 48 |
+
2025-02-16 11:54:40,152 INFO MainThread:424 [wandb_init.py:_resume_backend():559] resuming backend
|
| 49 |
+
2025-02-16 11:54:43,074 INFO MainThread:424 [jupyter.py:save_ipynb():386] not saving jupyter notebook
|
| 50 |
+
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wandb/latest-run/run-ypm5ne5j.wandb
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| 1 |
+
Classification Report:
|
| 2 |
+
precision recall f1-score support
|
| 3 |
+
|
| 4 |
+
Acute Myocardial Infarction 1.00 1.00 1.00 44
|
| 5 |
+
Acute Renal Failure 1.00 1.00 1.00 59
|
| 6 |
+
Asthma 1.00 1.00 1.00 53
|
| 7 |
+
Cerebrovascular Accident 1.00 1.00 1.00 46
|
| 8 |
+
Chronic Kidney Disease 1.00 1.00 1.00 57
|
| 9 |
+
Chronic Obstructive Pulmonary Disease 1.00 1.00 1.00 54
|
| 10 |
+
Community-Acquired Pneumonia 1.00 1.00 1.00 43
|
| 11 |
+
Congestive Heart Failure 1.00 1.00 1.00 53
|
| 12 |
+
Deep Vein Thrombosis 1.00 1.00 1.00 56
|
| 13 |
+
Gastroesophageal Reflux Disease 1.00 1.00 1.00 37
|
| 14 |
+
Hypertension 1.00 1.00 1.00 44
|
| 15 |
+
Liver Cirrhosis 1.00 1.00 1.00 44
|
| 16 |
+
Peptic Ulcer Disease 1.00 1.00 1.00 56
|
| 17 |
+
Pulmonary Embolism 1.00 1.00 1.00 51
|
| 18 |
+
Rheumatoid Arthritis 1.00 1.00 1.00 50
|
| 19 |
+
Sepsis 1.00 1.00 1.00 46
|
| 20 |
+
Septic Shock 1.00 1.00 1.00 48
|
| 21 |
+
Stroke 1.00 1.00 1.00 52
|
| 22 |
+
Type 2 Diabetes Mellitus 1.00 1.00 1.00 62
|
| 23 |
+
Urinary Tract Infection 1.00 1.00 1.00 45
|
| 24 |
+
|
| 25 |
+
accuracy 1.00 1000
|
| 26 |
+
macro avg 1.00 1.00 1.00 1000
|
| 27 |
+
weighted avg 1.00 1.00 1.00 1000
|
| 28 |
+
|
| 29 |
+
Classification Report:
|
| 30 |
+
precision recall f1-score support
|
| 31 |
+
|
| 32 |
+
Acute Myocardial Infarction 1.00 1.00 1.00 44
|
| 33 |
+
Acute Renal Failure 1.00 1.00 1.00 59
|
| 34 |
+
Asthma 1.00 1.00 1.00 53
|
| 35 |
+
Cerebrovascular Accident 1.00 1.00 1.00 46
|
| 36 |
+
Chronic Kidney Disease 1.00 1.00 1.00 57
|
| 37 |
+
Chronic Obstructive Pulmonary Disease 1.00 1.00 1.00 54
|
| 38 |
+
Community-Acquired Pneumonia 1.00 1.00 1.00 43
|
| 39 |
+
Congestive Heart Failure 1.00 1.00 1.00 53
|
| 40 |
+
Deep Vein Thrombosis 1.00 1.00 1.00 56
|
| 41 |
+
Gastroesophageal Reflux Disease 1.00 1.00 1.00 37
|
| 42 |
+
Hypertension 1.00 1.00 1.00 44
|
| 43 |
+
Liver Cirrhosis 1.00 1.00 1.00 44
|
| 44 |
+
Peptic Ulcer Disease 1.00 1.00 1.00 56
|
| 45 |
+
Pulmonary Embolism 1.00 1.00 1.00 51
|
| 46 |
+
Rheumatoid Arthritis 1.00 1.00 1.00 50
|
| 47 |
+
Sepsis 1.00 1.00 1.00 46
|
| 48 |
+
Septic Shock 1.00 1.00 1.00 48
|
| 49 |
+
Stroke 1.00 1.00 1.00 52
|
| 50 |
+
Type 2 Diabetes Mellitus 1.00 1.00 1.00 62
|
| 51 |
+
Urinary Tract Infection 1.00 1.00 1.00 45
|
| 52 |
+
|
| 53 |
+
accuracy 1.00 1000
|
| 54 |
+
macro avg 1.00 1.00 1.00 1000
|
| 55 |
+
weighted avg 1.00 1.00 1.00 1000
|
| 56 |
+
|
| 57 |
+
Collecting fastapi
|
| 58 |
+
Downloading fastapi-0.115.8-py3-none-any.whl.metadata (27 kB)
|
| 59 |
+
Collecting uvicorn
|
| 60 |
+
Downloading uvicorn-0.34.0-py3-none-any.whl.metadata (6.5 kB)
|
| 61 |
+
Collecting starlette<0.46.0,>=0.40.0 (from fastapi)
|
| 62 |
+
Downloading starlette-0.45.3-py3-none-any.whl.metadata (6.3 kB)
|
| 63 |
+
Requirement already satisfied: pydantic!=1.8,!=1.8.1,!=2.0.0,!=2.0.1,!=2.1.0,<3.0.0,>=1.7.4 in /usr/local/lib/python3.11/dist-packages (from fastapi) (2.10.6)
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| 64 |
+
Requirement already satisfied: typing-extensions>=4.8.0 in /usr/local/lib/python3.11/dist-packages (from fastapi) (4.12.2)
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| 65 |
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Requirement already satisfied: click>=7.0 in /usr/local/lib/python3.11/dist-packages (from uvicorn) (8.1.8)
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Requirement already satisfied: h11>=0.8 in /usr/local/lib/python3.11/dist-packages (from uvicorn) (0.14.0)
|
| 67 |
+
Requirement already satisfied: annotated-types>=0.6.0 in /usr/local/lib/python3.11/dist-packages (from pydantic!=1.8,!=1.8.1,!=2.0.0,!=2.0.1,!=2.1.0,<3.0.0,>=1.7.4->fastapi) (0.7.0)
|
| 68 |
+
Requirement already satisfied: pydantic-core==2.27.2 in /usr/local/lib/python3.11/dist-packages (from pydantic!=1.8,!=1.8.1,!=2.0.0,!=2.0.1,!=2.1.0,<3.0.0,>=1.7.4->fastapi) (2.27.2)
|
| 69 |
+
Requirement already satisfied: anyio<5,>=3.6.2 in /usr/local/lib/python3.11/dist-packages (from starlette<0.46.0,>=0.40.0->fastapi) (3.7.1)
|
| 70 |
+
Requirement already satisfied: idna>=2.8 in /usr/local/lib/python3.11/dist-packages (from anyio<5,>=3.6.2->starlette<0.46.0,>=0.40.0->fastapi) (3.10)
|
| 71 |
+
Requirement already satisfied: sniffio>=1.1 in /usr/local/lib/python3.11/dist-packages (from anyio<5,>=3.6.2->starlette<0.46.0,>=0.40.0->fastapi) (1.3.1)
|
| 72 |
+
Downloading fastapi-0.115.8-py3-none-any.whl (94 kB)
|
| 73 |
+
[2K [90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━[0m [32m94.8/94.8 kB[0m [31m4.8 MB/s[0m eta [36m0:00:00[0m
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| 74 |
+
[?25hDownloading uvicorn-0.34.0-py3-none-any.whl (62 kB)
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+
[2K [90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━[0m [32m62.3/62.3 kB[0m [31m7.4 MB/s[0m eta [36m0:00:00[0m
|
| 76 |
+
[?25hDownloading starlette-0.45.3-py3-none-any.whl (71 kB)
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| 77 |
+
[2K [90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━[0m [32m71.5/71.5 kB[0m [31m8.6 MB/s[0m eta [36m0:00:00[0m
|
| 78 |
+
[?25hInstalling collected packages: uvicorn, starlette, fastapi
|
| 79 |
+
Successfully installed fastapi-0.115.8 starlette-0.45.3 uvicorn-0.34.0
|
| 80 |
+
Collecting PyPDF2
|
| 81 |
+
Downloading pypdf2-3.0.1-py3-none-any.whl.metadata (6.8 kB)
|
| 82 |
+
Downloading pypdf2-3.0.1-py3-none-any.whl (232 kB)
|
| 83 |
+
[2K [90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━[0m [32m232.6/232.6 kB[0m [31m4.4 MB/s[0m eta [36m0:00:00[0ma [36m0:00:01[0m
|
| 84 |
+
[?25hInstalling collected packages: PyPDF2
|
| 85 |
+
Successfully installed PyPDF2-3.0.1
|
| 86 |
+
[31mERROR: Could not find a version that satisfies the requirement io (from versions: none)[0m[31m
|
| 87 |
+
[0m[31mERROR: No matching distribution found for io[0m[31m
|
| 88 |
+
[0mRequirement already satisfied: PyPDF2 in /usr/local/lib/python3.11/dist-packages (3.0.1)
|
| 89 |
+
ERROR:fastapi:Form data requires "python-multipart" to be installed.
|
| 90 |
+
You can install "python-multipart" with:
|
| 91 |
+
|
| 92 |
+
pip install python-multipart
|
| 93 |
+
Collecting python-multipart
|
| 94 |
+
Downloading python_multipart-0.0.20-py3-none-any.whl.metadata (1.8 kB)
|
| 95 |
+
Downloading python_multipart-0.0.20-py3-none-any.whl (24 kB)
|
| 96 |
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Installing collected packages: python-multipart
|
| 97 |
+
Successfully installed python-multipart-0.0.20
|
| 98 |
+
Requirement already satisfied: nest_asyncio in /usr/local/lib/python3.11/dist-packages (1.6.0)
|
| 99 |
+
Collecting pyngrok
|
| 100 |
+
Downloading pyngrok-7.2.3-py3-none-any.whl.metadata (8.7 kB)
|
| 101 |
+
Requirement already satisfied: PyYAML>=5.1 in /usr/local/lib/python3.11/dist-packages (from pyngrok) (6.0.2)
|
| 102 |
+
Downloading pyngrok-7.2.3-py3-none-any.whl (23 kB)
|
| 103 |
+
Installing collected packages: pyngrok
|
| 104 |
+
Successfully installed pyngrok-7.2.3
|
| 105 |
+
Requirement already satisfied: fastapi in /usr/local/lib/python3.11/dist-packages (0.115.8)
|
| 106 |
+
Requirement already satisfied: uvicorn in /usr/local/lib/python3.11/dist-packages (0.34.0)
|
| 107 |
+
Requirement already satisfied: jinja2 in /usr/local/lib/python3.11/dist-packages (3.1.5)
|
| 108 |
+
Requirement already satisfied: python-multipart in /usr/local/lib/python3.11/dist-packages (0.0.20)
|
| 109 |
+
Requirement already satisfied: PyPDF2 in /usr/local/lib/python3.11/dist-packages (3.0.1)
|
| 110 |
+
Requirement already satisfied: pydantic in /usr/local/lib/python3.11/dist-packages (2.10.6)
|
| 111 |
+
Requirement already satisfied: nest_asyncio in /usr/local/lib/python3.11/dist-packages (1.6.0)
|
| 112 |
+
Requirement already satisfied: pyngrok in /usr/local/lib/python3.11/dist-packages (7.2.3)
|
| 113 |
+
Requirement already satisfied: starlette<0.46.0,>=0.40.0 in /usr/local/lib/python3.11/dist-packages (from fastapi) (0.45.3)
|
| 114 |
+
Requirement already satisfied: typing-extensions>=4.8.0 in /usr/local/lib/python3.11/dist-packages (from fastapi) (4.12.2)
|
| 115 |
+
Requirement already satisfied: click>=7.0 in /usr/local/lib/python3.11/dist-packages (from uvicorn) (8.1.8)
|
| 116 |
+
Requirement already satisfied: h11>=0.8 in /usr/local/lib/python3.11/dist-packages (from uvicorn) (0.14.0)
|
| 117 |
+
Requirement already satisfied: MarkupSafe>=2.0 in /usr/local/lib/python3.11/dist-packages (from jinja2) (3.0.2)
|
| 118 |
+
Requirement already satisfied: annotated-types>=0.6.0 in /usr/local/lib/python3.11/dist-packages (from pydantic) (0.7.0)
|
| 119 |
+
Requirement already satisfied: pydantic-core==2.27.2 in /usr/local/lib/python3.11/dist-packages (from pydantic) (2.27.2)
|
| 120 |
+
Requirement already satisfied: PyYAML>=5.1 in /usr/local/lib/python3.11/dist-packages (from pyngrok) (6.0.2)
|
| 121 |
+
Requirement already satisfied: anyio<5,>=3.6.2 in /usr/local/lib/python3.11/dist-packages (from starlette<0.46.0,>=0.40.0->fastapi) (3.7.1)
|
| 122 |
+
Requirement already satisfied: idna>=2.8 in /usr/local/lib/python3.11/dist-packages (from anyio<5,>=3.6.2->starlette<0.46.0,>=0.40.0->fastapi) (3.10)
|
| 123 |
+
Requirement already satisfied: sniffio>=1.1 in /usr/local/lib/python3.11/dist-packages (from anyio<5,>=3.6.2->starlette<0.46.0,>=0.40.0->fastapi) (1.3.1)
|
| 124 |
+
adding: content/ (stored 0%)
|
| 125 |
+
|
| 126 |
+
ERROR:pyngrok.process.ngrok:t=2025-02-16T12:08:19+0000 lvl=eror msg="failed to reconnect session" obj=tunnels.session err="authentication failed: Usage of ngrok requires a verified account and authtoken.\n\nSign up for an account: https://dashboard.ngrok.com/signup\nInstall your authtoken: https://dashboard.ngrok.com/get-started/your-authtoken\r\n\r\nERR_NGROK_4018\r\n"
|
| 127 |
+
ERROR:pyngrok.process.ngrok:t=2025-02-16T12:08:19+0000 lvl=eror msg="session closing" obj=tunnels.session err="authentication failed: Usage of ngrok requires a verified account and authtoken.\n\nSign up for an account: https://dashboard.ngrok.com/signup\nInstall your authtoken: https://dashboard.ngrok.com/get-started/your-authtoken\r\n\r\nERR_NGROK_4018\r\n"
|
| 128 |
+
ERROR:pyngrok.process.ngrok:t=2025-02-16T12:08:19+0000 lvl=eror msg="terminating with error" obj=app err="authentication failed: Usage of ngrok requires a verified account and authtoken.\n\nSign up for an account: https://dashboard.ngrok.com/signup\nInstall your authtoken: https://dashboard.ngrok.com/get-started/your-authtoken\r\n\r\nERR_NGROK_4018\r\n"
|
| 129 |
+
CRITICAL:pyngrok.process.ngrok:t=2025-02-16T12:08:19+0000 lvl=crit msg="command failed" err="authentication failed: Usage of ngrok requires a verified account and authtoken.\n\nSign up for an account: https://dashboard.ngrok.com/signup\nInstall your authtoken: https://dashboard.ngrok.com/get-started/your-authtoken\r\n\r\nERR_NGROK_4018\r\n"
|
| 130 |
+
adding: content/.config/ (stored 0%)
|
| 131 |
+
adding: content/.config/default_configs.db (deflated 98%)
|
| 132 |
+
adding: content/.config/configurations/ (stored 0%)
|
| 133 |
+
adding: content/.config/configurations/config_default (deflated 15%)
|
| 134 |
+
adding: content/.config/config_sentinel (stored 0%)
|
| 135 |
+
adding: content/.config/gce (stored 0%)
|
| 136 |
+
adding: content/.config/hidden_gcloud_config_universe_descriptor_data_cache_configs.db (deflated 97%)
|
| 137 |
+
adding: content/.config/.last_opt_in_prompt.yaml (stored 0%)
|
| 138 |
+
adding: content/.config/.last_survey_prompt.yaml (stored 0%)
|
| 139 |
+
adding: content/.config/.last_update_check.json (deflated 24%)
|
| 140 |
+
adding: content/.config/logs/ (stored 0%)
|
| 141 |
+
adding: content/.config/logs/2025.02.13/ (stored 0%)
|
| 142 |
+
adding: content/.config/logs/2025.02.13/14.18.34.923015.log (deflated 58%)
|
| 143 |
+
adding: content/.config/logs/2025.02.13/14.18.22.924899.log (deflated 58%)
|
| 144 |
+
adding: content/.config/logs/2025.02.13/14.17.52.239776.log (deflated 93%)
|
| 145 |
+
adding: content/.config/logs/2025.02.13/14.18.44.294756.log (deflated 56%)
|
| 146 |
+
adding: content/.config/logs/2025.02.13/14.18.43.611991.log (deflated 57%)
|
| 147 |
+
adding: content/.config/logs/2025.02.13/14.18.31.091747.log (deflated 87%)
|
| 148 |
+
adding: content/.config/active_config (stored 0%)
|
| 149 |
+
adding: content/patient 2 report.pdf (deflated 9%)
|
| 150 |
+
adding: content/results/ (stored 0%)
|
| 151 |
+
adding: content/results/checkpoint-375/ (stored 0%)
|
| 152 |
+
adding: content/results/checkpoint-375/scheduler.pt (deflated 55%)
|
| 153 |
+
adding: content/results/checkpoint-375/config.json (deflated 62%)
|
| 154 |
+
adding: content/results/checkpoint-375/optimizer.pt (deflated 27%)
|
| 155 |
+
adding: content/results/checkpoint-375/model.safetensors (deflated 7%)
|
| 156 |
+
adding: content/results/checkpoint-375/trainer_state.json (deflated 78%)
|
| 157 |
+
adding: content/results/checkpoint-375/training_args.bin (deflated 51%)
|
| 158 |
+
adding: content/results/checkpoint-375/rng_state.pth (deflated 25%)
|
| 159 |
+
adding: content/results/checkpoint-625/ (stored 0%)
|
| 160 |
+
adding: content/results/checkpoint-625/scheduler.pt (deflated 56%)
|
| 161 |
+
adding: content/results/checkpoint-625/config.json (deflated 62%)
|
| 162 |
+
adding: content/results/checkpoint-625/optimizer.pt (deflated 27%)
|
| 163 |
+
adding: content/results/checkpoint-625/model.safetensors (deflated 7%)
|
| 164 |
+
adding: content/results/checkpoint-625/trainer_state.json (deflated 80%)
|
| 165 |
+
adding: content/results/checkpoint-625/training_args.bin (deflated 51%)
|
| 166 |
+
adding: content/results/checkpoint-625/rng_state.pth (deflated 25%)
|
| 167 |
+
adding: content/results/trainer_state.json (deflated 80%)
|
| 168 |
+
adding: content/results/checkpoint-500/ (stored 0%)
|
| 169 |
+
adding: content/results/checkpoint-500/scheduler.pt (deflated 57%)
|
| 170 |
+
adding: content/results/checkpoint-500/config.json (deflated 62%)
|
| 171 |
+
adding: content/results/checkpoint-500/optimizer.pt (deflated 27%)
|
| 172 |
+
adding: content/results/checkpoint-500/model.safetensors (deflated 7%)
|
| 173 |
+
adding: content/results/checkpoint-500/trainer_state.json (deflated 79%)
|
| 174 |
+
adding: content/results/checkpoint-500/training_args.bin (deflated 51%)
|
| 175 |
+
adding: content/results/checkpoint-500/rng_state.pth (deflated 25%)
|
| 176 |
+
adding: content/patient_model/ (stored 0%)
|
| 177 |
+
adding: content/patient_model/config.json (deflated 62%)
|
| 178 |
+
adding: content/patient_model/tokenizer_config.json (deflated 75%)
|
| 179 |
+
adding: content/patient_model/model.safetensors (deflated 7%)
|
| 180 |
+
adding: content/patient_model/special_tokens_map.json (deflated 42%)
|
| 181 |
+
adding: content/patient_model/vocab.txt (deflated 49%)
|
| 182 |
+
adding: content/patient_model/training_args.bin (deflated 51%)
|
| 183 |
+
adding: content/label_encoder.pkl (deflated 30%)
|
| 184 |
+
adding: content/patient 3 repo
|
wandb/run-20250216_113712-ypm5ne5j/files/requirements.txt
ADDED
|
@@ -0,0 +1,615 @@
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|
|
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|
|
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|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
xxhash==3.5.0
|
| 2 |
+
multiprocess==0.70.16
|
| 3 |
+
dill==0.3.8
|
| 4 |
+
datasets==3.3.0
|
| 5 |
+
google-colab==1.0.0
|
| 6 |
+
nvidia-cuda-nvcc-cu12==12.5.82
|
| 7 |
+
google-pasta==0.2.0
|
| 8 |
+
psycopg2==2.9.10
|
| 9 |
+
bigquery-magics==0.5.0
|
| 10 |
+
referencing==0.36.2
|
| 11 |
+
text-unidecode==1.3
|
| 12 |
+
aiohttp==3.11.12
|
| 13 |
+
arviz==0.20.0
|
| 14 |
+
Markdown==3.7
|
| 15 |
+
Sphinx==8.1.3
|
| 16 |
+
gym==0.25.2
|
| 17 |
+
altair==5.5.0
|
| 18 |
+
opt_einsum==3.4.0
|
| 19 |
+
datascience==0.17.6
|
| 20 |
+
geographiclib==2.0
|
| 21 |
+
nest-asyncio==1.6.0
|
| 22 |
+
nvidia-cuda-cupti-cu12==12.5.82
|
| 23 |
+
orjson==3.10.15
|
| 24 |
+
imageio==2.37.0
|
| 25 |
+
sigstore-protobuf-specs==0.3.2
|
| 26 |
+
mistune==3.1.1
|
| 27 |
+
flatbuffers==25.2.10
|
| 28 |
+
PyJWT==2.10.1
|
| 29 |
+
logical-unification==0.4.6
|
| 30 |
+
lxml==5.3.1
|
| 31 |
+
google-cloud-core==2.4.1
|
| 32 |
+
fastai==2.7.18
|
| 33 |
+
pylibcugraph-cu12==24.12.0
|
| 34 |
+
google-ai-generativelanguage==0.6.15
|
| 35 |
+
email_validator==2.2.0
|
| 36 |
+
scs==3.2.7.post2
|
| 37 |
+
pillow==11.1.0
|
| 38 |
+
docker-pycreds==0.4.0
|
| 39 |
+
dnspython==2.7.0
|
| 40 |
+
cmake==3.31.4
|
| 41 |
+
thinc==8.2.5
|
| 42 |
+
fastrlock==0.8.3
|
| 43 |
+
immutabledict==4.2.1
|
| 44 |
+
entrypoints==0.4
|
| 45 |
+
rpy2==3.4.2
|
| 46 |
+
huggingface-hub==0.28.1
|
| 47 |
+
duckdb==1.1.3
|
| 48 |
+
pandas-stubs==2.2.2.240909
|
| 49 |
+
toolz==0.12.1
|
| 50 |
+
jax-cuda12-plugin==0.4.33
|
| 51 |
+
nibabel==5.3.2
|
| 52 |
+
sphinxcontrib-applehelp==2.0.0
|
| 53 |
+
pynvjitlink-cu12==0.5.0
|
| 54 |
+
babel==2.17.0
|
| 55 |
+
future==1.0.0
|
| 56 |
+
plotnine==0.14.5
|
| 57 |
+
matplotlib-inline==0.1.7
|
| 58 |
+
srsly==2.5.1
|
| 59 |
+
textblob==0.19.0
|
| 60 |
+
pyperclip==1.9.0
|
| 61 |
+
httplib2==0.22.0
|
| 62 |
+
matplotlib==3.10.0
|
| 63 |
+
xlrd==2.0.1
|
| 64 |
+
jupyter-server==1.24.0
|
| 65 |
+
google-cloud-bigquery-storage==2.28.0
|
| 66 |
+
pytensor==2.27.1
|
| 67 |
+
sphinxcontrib-qthelp==2.0.0
|
| 68 |
+
typer==0.15.1
|
| 69 |
+
tensorboard-data-server==0.7.2
|
| 70 |
+
google-cloud-datastore==2.20.2
|
| 71 |
+
plotly==5.24.1
|
| 72 |
+
ipython-sql==0.5.0
|
| 73 |
+
etuples==0.3.9
|
| 74 |
+
PyDrive2==1.21.3
|
| 75 |
+
shap==0.46.0
|
| 76 |
+
google-auth-httplib2==0.2.0
|
| 77 |
+
spacy-loggers==1.0.5
|
| 78 |
+
cachetools==5.5.1
|
| 79 |
+
platformdirs==4.3.6
|
| 80 |
+
MarkupSafe==3.0.2
|
| 81 |
+
wrapt==1.17.2
|
| 82 |
+
docstring_parser==0.16
|
| 83 |
+
sentry-sdk==2.21.0
|
| 84 |
+
kaggle==1.6.17
|
| 85 |
+
highspy==1.9.0
|
| 86 |
+
cloudpickle==3.1.1
|
| 87 |
+
jsonpickle==4.0.1
|
| 88 |
+
pygit2==1.17.0
|
| 89 |
+
python-dateutil==2.8.2
|
| 90 |
+
python-louvain==0.16
|
| 91 |
+
opencv-python-headless==4.11.0.86
|
| 92 |
+
namex==0.0.8
|
| 93 |
+
folium==0.19.4
|
| 94 |
+
Pygments==2.18.0
|
| 95 |
+
ptyprocess==0.7.0
|
| 96 |
+
rpds-py==0.22.3
|
| 97 |
+
optax==0.2.4
|
| 98 |
+
nvidia-cublas-cu12==12.5.3.2
|
| 99 |
+
joblib==1.4.2
|
| 100 |
+
pyparsing==3.2.1
|
| 101 |
+
python-utils==3.9.1
|
| 102 |
+
astropy==7.0.1
|
| 103 |
+
decorator==4.4.2
|
| 104 |
+
multidict==6.1.0
|
| 105 |
+
urllib3==2.3.0
|
| 106 |
+
orbax-checkpoint==0.6.4
|
| 107 |
+
python-slugify==8.0.4
|
| 108 |
+
google-auth==2.27.0
|
| 109 |
+
setproctitle==1.3.4
|
| 110 |
+
google-cloud-bigquery-connection==1.17.0
|
| 111 |
+
multitasking==0.0.11
|
| 112 |
+
statsmodels==0.14.4
|
| 113 |
+
GDAL==3.6.4
|
| 114 |
+
zipp==3.21.0
|
| 115 |
+
cmdstanpy==1.2.5
|
| 116 |
+
regex==2024.11.6
|
| 117 |
+
torch==2.5.1+cu124
|
| 118 |
+
preshed==3.0.9
|
| 119 |
+
Send2Trash==1.8.3
|
| 120 |
+
catalogue==2.0.10
|
| 121 |
+
nvidia-curand-cu12==10.3.6.82
|
| 122 |
+
xgboost==2.1.4
|
| 123 |
+
CacheControl==0.14.2
|
| 124 |
+
prompt_toolkit==3.0.50
|
| 125 |
+
opencv-contrib-python==4.11.0.86
|
| 126 |
+
stringzilla==3.11.3
|
| 127 |
+
cycler==0.12.1
|
| 128 |
+
absl-py==1.4.0
|
| 129 |
+
music21==9.3.0
|
| 130 |
+
nvidia-nvjitlink-cu12==12.5.82
|
| 131 |
+
tensorflow-hub==0.16.1
|
| 132 |
+
argon2-cffi==23.1.0
|
| 133 |
+
pydantic_core==2.27.2
|
| 134 |
+
keras==3.8.0
|
| 135 |
+
tuf==5.1.0
|
| 136 |
+
wasabi==1.1.3
|
| 137 |
+
geemap==0.35.1
|
| 138 |
+
google-api-core==2.19.2
|
| 139 |
+
keras-nlp==0.18.1
|
| 140 |
+
networkx==3.4.2
|
| 141 |
+
grpcio-status==1.62.3
|
| 142 |
+
simsimd==6.2.1
|
| 143 |
+
numexpr==2.10.2
|
| 144 |
+
snowballstemmer==2.2.0
|
| 145 |
+
tcmlib==1.2.0
|
| 146 |
+
opencv-python==4.11.0.86
|
| 147 |
+
Pyomo==6.8.2
|
| 148 |
+
scikit-learn==1.6.1
|
| 149 |
+
pandas-gbq==0.26.1
|
| 150 |
+
dlib==19.24.2
|
| 151 |
+
intel-cmplr-lib-ur==2025.0.4
|
| 152 |
+
langchain-core==0.3.35
|
| 153 |
+
smart-open==7.1.0
|
| 154 |
+
sphinxcontrib-devhelp==2.0.0
|
| 155 |
+
importlib_metadata==8.6.1
|
| 156 |
+
pyzmq==24.0.1
|
| 157 |
+
tensorflow-datasets==4.9.7
|
| 158 |
+
pathlib==1.0.1
|
| 159 |
+
flax==0.10.3
|
| 160 |
+
astropy-iers-data==0.2025.2.10.0.33.26
|
| 161 |
+
jupyter-leaflet==0.19.2
|
| 162 |
+
en-core-web-sm==3.7.1
|
| 163 |
+
click==8.1.8
|
| 164 |
+
jupyterlab_pygments==0.3.0
|
| 165 |
+
sentencepiece==0.2.0
|
| 166 |
+
optree==0.14.0
|
| 167 |
+
termcolor==2.5.0
|
| 168 |
+
gcsfs==2024.10.0
|
| 169 |
+
kiwisolver==1.4.8
|
| 170 |
+
torchaudio==2.5.1+cu124
|
| 171 |
+
pluggy==1.5.0
|
| 172 |
+
smmap==5.0.2
|
| 173 |
+
rfc8785==0.1.4
|
| 174 |
+
pyasn1==0.6.1
|
| 175 |
+
six==1.17.0
|
| 176 |
+
sphinxcontrib-serializinghtml==2.0.0
|
| 177 |
+
imagesize==1.4.1
|
| 178 |
+
simple-parsing==0.1.7
|
| 179 |
+
opentelemetry-sdk==1.16.0
|
| 180 |
+
distro==1.9.0
|
| 181 |
+
ply==3.11
|
| 182 |
+
PySocks==1.7.1
|
| 183 |
+
graphviz==0.20.3
|
| 184 |
+
fastprogress==1.0.3
|
| 185 |
+
autograd==1.7.0
|
| 186 |
+
diffusers==0.32.2
|
| 187 |
+
langsmith==0.3.8
|
| 188 |
+
soupsieve==2.6
|
| 189 |
+
grpc-interceptor==0.15.4
|
| 190 |
+
greenlet==3.1.1
|
| 191 |
+
gymnasium==1.0.0
|
| 192 |
+
python-box==7.3.2
|
| 193 |
+
httpcore==1.0.7
|
| 194 |
+
googledrivedownloader==1.1.0
|
| 195 |
+
branca==0.8.1
|
| 196 |
+
itsdangerous==2.2.0
|
| 197 |
+
grpc-google-iam-v1==0.14.0
|
| 198 |
+
cons==0.4.6
|
| 199 |
+
opentelemetry-semantic-conventions==0.37b0
|
| 200 |
+
aiohappyeyeballs==2.4.6
|
| 201 |
+
requests-oauthlib==2.0.0
|
| 202 |
+
jieba==0.42.1
|
| 203 |
+
tensorboard==2.18.0
|
| 204 |
+
bleach==6.2.0
|
| 205 |
+
umf==0.9.1
|
| 206 |
+
tenacity==9.0.0
|
| 207 |
+
defusedxml==0.7.1
|
| 208 |
+
fastjsonschema==2.21.1
|
| 209 |
+
pylibcudf-cu12==24.12.0
|
| 210 |
+
markdown-it-py==3.0.0
|
| 211 |
+
et_xmlfile==2.0.0
|
| 212 |
+
typing_extensions==4.12.2
|
| 213 |
+
patsy==1.0.1
|
| 214 |
+
gast==0.6.0
|
| 215 |
+
cffi==1.17.1
|
| 216 |
+
ipyleaflet==0.19.2
|
| 217 |
+
imbalanced-learn==0.13.0
|
| 218 |
+
jupyterlab_widgets==3.0.13
|
| 219 |
+
PyDrive==1.3.1
|
| 220 |
+
intel-openmp==2025.0.4
|
| 221 |
+
albumentations==2.0.4
|
| 222 |
+
google-genai==0.8.0
|
| 223 |
+
locket==1.0.0
|
| 224 |
+
cryptography==43.0.3
|
| 225 |
+
oauthlib==3.2.2
|
| 226 |
+
panel==1.6.0
|
| 227 |
+
safetensors==0.5.2
|
| 228 |
+
iniconfig==2.0.0
|
| 229 |
+
imageio-ffmpeg==0.6.0
|
| 230 |
+
libclang==18.1.1
|
| 231 |
+
dask==2024.10.0
|
| 232 |
+
pexpect==4.9.0
|
| 233 |
+
nbclient==0.10.2
|
| 234 |
+
threadpoolctl==3.5.0
|
| 235 |
+
protobuf==4.25.6
|
| 236 |
+
google==2.0.3
|
| 237 |
+
googleapis-common-protos==1.66.0
|
| 238 |
+
colorlover==0.3.0
|
| 239 |
+
pandas-datareader==0.10.0
|
| 240 |
+
moviepy==1.0.3
|
| 241 |
+
sklearn-pandas==2.2.0
|
| 242 |
+
pydantic==2.10.6
|
| 243 |
+
webencodings==0.5.1
|
| 244 |
+
soundfile==0.13.1
|
| 245 |
+
pyshp==2.3.1
|
| 246 |
+
mpmath==1.3.0
|
| 247 |
+
ml-dtypes==0.4.1
|
| 248 |
+
tinycss2==1.4.0
|
| 249 |
+
geopandas==1.0.1
|
| 250 |
+
spacy-legacy==3.0.12
|
| 251 |
+
tzdata==2025.1
|
| 252 |
+
gin-config==0.5.0
|
| 253 |
+
mkl==2025.0.1
|
| 254 |
+
ipython==7.34.0
|
| 255 |
+
nvidia-nvtx-cu12==12.4.127
|
| 256 |
+
types-pytz==2025.1.0.20250204
|
| 257 |
+
promise==2.3
|
| 258 |
+
grpcio==1.70.0
|
| 259 |
+
chex==0.1.88
|
| 260 |
+
miniKanren==1.0.3
|
| 261 |
+
weasel==0.4.1
|
| 262 |
+
pyOpenSSL==24.2.1
|
| 263 |
+
google-crc32c==1.6.0
|
| 264 |
+
sniffio==1.3.1
|
| 265 |
+
nvidia-nvcomp-cu12==4.1.0.6
|
| 266 |
+
uritemplate==4.1.1
|
| 267 |
+
jsonpointer==3.0.0
|
| 268 |
+
ipyfilechooser==0.6.0
|
| 269 |
+
timm==1.0.14
|
| 270 |
+
google-cloud-pubsub==2.25.0
|
| 271 |
+
importlib_resources==6.5.2
|
| 272 |
+
holoviews==1.20.0
|
| 273 |
+
python-snappy==0.7.3
|
| 274 |
+
html5lib==1.1
|
| 275 |
+
scooby==0.10.0
|
| 276 |
+
google-cloud-firestore==2.20.0
|
| 277 |
+
ndindex==1.9.2
|
| 278 |
+
pyviz_comms==3.0.4
|
| 279 |
+
certifi==2025.1.31
|
| 280 |
+
pydotplus==2.0.2
|
| 281 |
+
google-api-python-client==2.160.0
|
| 282 |
+
charset-normalizer==3.4.1
|
| 283 |
+
google-spark-connect==0.5.2
|
| 284 |
+
prophet==1.1.6
|
| 285 |
+
pylibraft-cu12==24.12.0
|
| 286 |
+
pickleshare==0.7.5
|
| 287 |
+
qdldl==0.1.7.post5
|
| 288 |
+
google-cloud-spanner==3.51.0
|
| 289 |
+
torchvision==0.20.1+cu124
|
| 290 |
+
numpy==1.26.4
|
| 291 |
+
progressbar2==4.5.0
|
| 292 |
+
pygame==2.6.1
|
| 293 |
+
openpyxl==3.1.5
|
| 294 |
+
cupy-cuda12x==13.3.0
|
| 295 |
+
dm-tree==0.1.9
|
| 296 |
+
parsy==2.1
|
| 297 |
+
wordcloud==1.9.4
|
| 298 |
+
pymc==5.20.1
|
| 299 |
+
google-cloud-dataproc==5.16.0
|
| 300 |
+
kagglehub==0.3.7
|
| 301 |
+
keras-hub==0.18.1
|
| 302 |
+
pydata-google-auth==1.9.1
|
| 303 |
+
atpublic==4.1.0
|
| 304 |
+
propcache==0.2.1
|
| 305 |
+
zstandard==0.23.0
|
| 306 |
+
prettytable==3.14.0
|
| 307 |
+
param==2.2.0
|
| 308 |
+
google-cloud-functions==1.19.0
|
| 309 |
+
rsa==4.9
|
| 310 |
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webcolors==24.11.1
|
| 311 |
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google-cloud-storage==2.19.0
|
| 312 |
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llvmlite==0.44.0
|
| 313 |
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attrs==25.1.0
|
| 314 |
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frozenlist==1.5.0
|
| 315 |
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pyproj==3.7.0
|
| 316 |
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pyspark==3.5.4
|
| 317 |
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jsonschema-specifications==2024.10.1
|
| 318 |
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jax==0.4.33
|
| 319 |
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accelerate==1.3.0
|
| 320 |
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tf-slim==1.1.0
|
| 321 |
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langcodes==3.5.0
|
| 322 |
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tensorflow-probability==0.25.0
|
| 323 |
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pycocotools==2.0.8
|
| 324 |
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geopy==2.4.1
|
| 325 |
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polars==1.9.0
|
| 326 |
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torchsummary==1.5.1
|
| 327 |
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mlxtend==0.23.4
|
| 328 |
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contourpy==1.3.1
|
| 329 |
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firebase-admin==6.6.0
|
| 330 |
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eerepr==0.1.0
|
| 331 |
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jupyter_core==5.7.2
|
| 332 |
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fonttools==4.56.0
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| 333 |
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imgaug==0.4.0
|
| 334 |
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yarl==1.18.3
|
| 335 |
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traitlets==5.7.1
|
| 336 |
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opentelemetry-api==1.16.0
|
| 337 |
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grpclib==0.4.7
|
| 338 |
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websocket-client==1.8.0
|
| 339 |
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py-cpuinfo==9.0.0
|
| 340 |
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numba-cuda==0.0.17.1
|
| 341 |
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nvidia-cuda-nvrtc-cu12==12.5.82
|
| 342 |
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murmurhash==1.0.12
|
| 343 |
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openai==1.61.1
|
| 344 |
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easydict==1.13
|
| 345 |
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sklearn-compat==0.1.3
|
| 346 |
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notebook_shim==0.2.4
|
| 347 |
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portpicker==1.5.2
|
| 348 |
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gitdb==4.0.12
|
| 349 |
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py4j==0.10.9.7
|
| 350 |
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xarray==2025.1.2
|
| 351 |
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hpack==4.1.0
|
| 352 |
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cvxpy==1.6.0
|
| 353 |
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libkvikio-cu12==24.12.1
|
| 354 |
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requests-toolbelt==1.0.0
|
| 355 |
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stanio==0.5.1
|
| 356 |
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lazy_loader==0.4
|
| 357 |
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jupyter-client==6.1.12
|
| 358 |
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prometheus_client==0.21.1
|
| 359 |
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wheel==0.45.1
|
| 360 |
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community==1.0.0b1
|
| 361 |
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hyperopt==0.2.7
|
| 362 |
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mdit-py-plugins==0.4.2
|
| 363 |
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tensorflow-text==2.18.1
|
| 364 |
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h5py==3.12.1
|
| 365 |
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id==1.5.0
|
| 366 |
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requests==2.32.3
|
| 367 |
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chardet==5.2.0
|
| 368 |
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yellowbrick==1.5
|
| 369 |
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partd==1.4.2
|
| 370 |
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language_data==1.3.0
|
| 371 |
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sigstore-rekor-types==0.0.18
|
| 372 |
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transformers==4.48.3
|
| 373 |
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einops==0.8.1
|
| 374 |
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tensorstore==0.1.71
|
| 375 |
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google-cloud-aiplatform==1.79.0
|
| 376 |
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GitPython==3.1.44
|
| 377 |
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pandas==2.2.2
|
| 378 |
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humanize==4.11.0
|
| 379 |
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anyio==3.7.1
|
| 380 |
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google-auth-oauthlib==1.2.1
|
| 381 |
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uc-micro-py==1.0.3
|
| 382 |
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matplotlib-venn==1.1.1
|
| 383 |
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httpx==0.28.1
|
| 384 |
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sentence-transformers==3.4.1
|
| 385 |
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spanner-graph-notebook==1.0.9
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| 386 |
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ipyevents==2.0.2
|
| 387 |
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langchain-text-splitters==0.3.6
|
| 388 |
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jaxlib==0.4.33
|
| 389 |
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bigframes==1.36.0
|
| 390 |
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tensorflow-metadata==1.16.1
|
| 391 |
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ipytree==0.2.2
|
| 392 |
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wcwidth==0.2.13
|
| 393 |
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argon2-cffi-bindings==21.2.0
|
| 394 |
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nvtx==0.2.10
|
| 395 |
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colour==0.1.5
|
| 396 |
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editdistance==0.8.1
|
| 397 |
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natsort==8.4.0
|
| 398 |
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Jinja2==3.1.5
|
| 399 |
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ibis-framework==9.2.0
|
| 400 |
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alabaster==1.0.0
|
| 401 |
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betterproto==2.0.0b6
|
| 402 |
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linkify-it-py==2.0.3
|
| 403 |
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typeguard==4.4.1
|
| 404 |
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google-cloud-bigquery==3.25.0
|
| 405 |
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triton==3.1.0
|
| 406 |
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nltk==3.9.1
|
| 407 |
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shapely==2.0.7
|
| 408 |
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blosc2==3.0.0
|
| 409 |
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peewee==3.17.9
|
| 410 |
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nbconvert==7.16.6
|
| 411 |
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glob2==0.7
|
| 412 |
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ipywidgets==7.7.1
|
| 413 |
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h11==0.14.0
|
| 414 |
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Deprecated==1.2.18
|
| 415 |
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pyarrow==17.0.0
|
| 416 |
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rich==13.9.4
|
| 417 |
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toml==0.10.2
|
| 418 |
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marisa-trie==1.2.1
|
| 419 |
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nvidia-cuda-runtime-cu12==12.5.82
|
| 420 |
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packaging==24.2
|
| 421 |
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parso==0.8.4
|
| 422 |
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wandb==0.19.6
|
| 423 |
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missingno==0.5.2
|
| 424 |
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etils==1.12.0
|
| 425 |
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langchain==0.3.18
|
| 426 |
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pymystem3==0.2.0
|
| 427 |
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gspread-dataframe==4.0.0
|
| 428 |
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mizani==0.13.1
|
| 429 |
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earthengine-api==1.5.2
|
| 430 |
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bokeh==3.6.3
|
| 431 |
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idna==3.10
|
| 432 |
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gensim==4.3.3
|
| 433 |
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cramjam==2.9.1
|
| 434 |
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aiosignal==1.3.2
|
| 435 |
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narwhals==1.26.0
|
| 436 |
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cymem==2.0.11
|
| 437 |
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cvxopt==1.3.2
|
| 438 |
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psutil==5.9.5
|
| 439 |
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tensorflow-io-gcs-filesystem==0.37.1
|
| 440 |
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sympy==1.13.1
|
| 441 |
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blis==0.7.11
|
| 442 |
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tifffile==2025.1.10
|
| 443 |
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hyperframe==6.1.0
|
| 444 |
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pycparser==2.22
|
| 445 |
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SQLAlchemy==2.0.38
|
| 446 |
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db-dtypes==1.4.1
|
| 447 |
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tbb==2022.0.0
|
| 448 |
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pytz==2025.1
|
| 449 |
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geocoder==1.38.1
|
| 450 |
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Cython==3.0.12
|
| 451 |
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jsonpatch==1.33
|
| 452 |
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astunparse==1.6.3
|
| 453 |
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pyogrio==0.10.0
|
| 454 |
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inflect==7.5.0
|
| 455 |
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tweepy==4.15.0
|
| 456 |
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jiter==0.8.2
|
| 457 |
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multipledispatch==1.0.0
|
| 458 |
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google-cloud-resource-manager==1.14.0
|
| 459 |
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notebook==6.5.5
|
| 460 |
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dopamine_rl==4.1.2
|
| 461 |
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librosa==0.10.2.post1
|
| 462 |
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slicer==0.0.8
|
| 463 |
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sqlglot==25.6.1
|
| 464 |
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ipyparallel==8.8.0
|
| 465 |
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tornado==6.4.2
|
| 466 |
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cyipopt==1.5.0
|
| 467 |
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more-itertools==10.6.0
|
| 468 |
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holidays==0.66
|
| 469 |
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tensorflow==2.18.0
|
| 470 |
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proto-plus==1.26.0
|
| 471 |
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albucore==0.0.23
|
| 472 |
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terminado==0.18.1
|
| 473 |
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jupyter-console==6.1.0
|
| 474 |
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google-cloud-iam==2.17.0
|
| 475 |
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docutils==0.21.2
|
| 476 |
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lightgbm==4.5.0
|
| 477 |
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cudf-cu12==24.12.0
|
| 478 |
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debugpy==1.8.0
|
| 479 |
+
pyerfa==2.0.1.5
|
| 480 |
+
nx-cugraph-cu12==24.12.0
|
| 481 |
+
fsspec==2024.10.0
|
| 482 |
+
clarabel==0.10.0
|
| 483 |
+
tabulate==0.9.0
|
| 484 |
+
rmm-cu12==24.12.1
|
| 485 |
+
peft==0.14.0
|
| 486 |
+
fastcore==1.7.29
|
| 487 |
+
jsonschema==4.23.0
|
| 488 |
+
backcall==0.2.0
|
| 489 |
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pytest==8.3.4
|
| 490 |
+
Werkzeug==3.1.3
|
| 491 |
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nvidia-cudnn-cu12==9.3.0.75
|
| 492 |
+
model-signing==0.2.0
|
| 493 |
+
blinker==1.9.0
|
| 494 |
+
imutils==0.5.4
|
| 495 |
+
audioread==3.0.1
|
| 496 |
+
traittypes==0.2.1
|
| 497 |
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scipy==1.13.1
|
| 498 |
+
google-cloud-translate==3.19.0
|
| 499 |
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gym-notices==0.0.8
|
| 500 |
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xyzservices==2025.1.0
|
| 501 |
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h5netcdf==1.5.0
|
| 502 |
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in-toto-attestation==0.9.3
|
| 503 |
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rfc3161-client==0.1.2
|
| 504 |
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pyasn1_modules==0.4.1
|
| 505 |
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widgetsnbextension==3.6.10
|
| 506 |
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cuda-python==12.6.0
|
| 507 |
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sphinxcontrib-htmlhelp==2.1.0
|
| 508 |
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nvidia-cusparse-cu12==12.5.1.3
|
| 509 |
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annotated-types==0.7.0
|
| 510 |
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cloudpathlib==0.20.0
|
| 511 |
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jellyfish==1.1.0
|
| 512 |
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gdown==5.2.0
|
| 513 |
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msgpack==1.1.0
|
| 514 |
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pooch==1.8.2
|
| 515 |
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sigstore==3.6.1
|
| 516 |
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beautifulsoup4==4.13.3
|
| 517 |
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cufflinks==0.17.3
|
| 518 |
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h2==4.2.0
|
| 519 |
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bqplot==0.12.44
|
| 520 |
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numba==0.61.0
|
| 521 |
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shellingham==1.5.4
|
| 522 |
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Bottleneck==1.4.2
|
| 523 |
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mdurl==0.1.2
|
| 524 |
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soxr==0.5.0.post1
|
| 525 |
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confection==0.1.5
|
| 526 |
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securesystemslib==1.2.0
|
| 527 |
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ale-py==0.10.1
|
| 528 |
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google-cloud-language==2.16.0
|
| 529 |
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osqp==0.6.7.post3
|
| 530 |
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gspread==6.1.4
|
| 531 |
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treescope==0.1.8
|
| 532 |
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frozendict==2.4.6
|
| 533 |
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nbclassic==1.2.0
|
| 534 |
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tqdm==4.67.1
|
| 535 |
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websockets==14.2
|
| 536 |
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pydot==3.0.4
|
| 537 |
+
array_record==0.6.0
|
| 538 |
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PyOpenGL==3.1.9
|
| 539 |
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google-generativeai==0.8.4
|
| 540 |
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httpimport==1.4.0
|
| 541 |
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colorcet==3.1.0
|
| 542 |
+
tf_keras==2.18.0
|
| 543 |
+
scikit-image==0.25.1
|
| 544 |
+
vega-datasets==0.9.0
|
| 545 |
+
PyYAML==6.0.2
|
| 546 |
+
proglog==0.1.10
|
| 547 |
+
yfinance==0.2.52
|
| 548 |
+
ipykernel==5.5.6
|
| 549 |
+
tzlocal==5.2
|
| 550 |
+
filelock==3.17.0
|
| 551 |
+
Farama-Notifications==0.0.4
|
| 552 |
+
spacy==3.7.5
|
| 553 |
+
Flask==3.1.0
|
| 554 |
+
nbformat==5.10.4
|
| 555 |
+
google-cloud-bigtable==2.28.1
|
| 556 |
+
nvidia-cusolver-cu12==11.6.3.83
|
| 557 |
+
fastdownload==0.0.7
|
| 558 |
+
nvidia-cufft-cu12==11.2.3.61
|
| 559 |
+
oauth2client==4.1.3
|
| 560 |
+
nvidia-nccl-cu12==2.21.5
|
| 561 |
+
libcudf-cu12==24.12.0
|
| 562 |
+
tables==3.10.2
|
| 563 |
+
google-resumable-media==2.7.2
|
| 564 |
+
jax-cuda12-pjrt==0.4.33
|
| 565 |
+
xarray-einstats==0.8.0
|
| 566 |
+
sqlparse==0.5.3
|
| 567 |
+
tokenizers==0.21.0
|
| 568 |
+
ratelim==0.1.6
|
| 569 |
+
sphinxcontrib-jsmath==1.0.1
|
| 570 |
+
ipython-genutils==0.2.0
|
| 571 |
+
seaborn==0.13.2
|
| 572 |
+
pandocfilters==1.5.1
|
| 573 |
+
python-apt==0.0.0
|
| 574 |
+
requirements-parser==0.9.0
|
| 575 |
+
pip==24.1.2
|
| 576 |
+
setuptools==75.1.0
|
| 577 |
+
types-setuptools==75.8.0.20250210
|
| 578 |
+
dbus-python==1.2.18
|
| 579 |
+
SecretStorage==3.3.1
|
| 580 |
+
oauthlib==3.2.0
|
| 581 |
+
httplib2==0.20.2
|
| 582 |
+
importlib-metadata==4.6.4
|
| 583 |
+
PyJWT==2.3.0
|
| 584 |
+
keyring==23.5.0
|
| 585 |
+
zipp==1.0.0
|
| 586 |
+
pyparsing==2.4.7
|
| 587 |
+
distro==1.7.0
|
| 588 |
+
more-itertools==8.10.0
|
| 589 |
+
python-apt==2.4.0+ubuntu4
|
| 590 |
+
launchpadlib==1.10.16
|
| 591 |
+
six==1.16.0
|
| 592 |
+
blinker==1.4
|
| 593 |
+
jeepney==0.7.1
|
| 594 |
+
PyGObject==3.42.1
|
| 595 |
+
lazr.uri==1.0.6
|
| 596 |
+
lazr.restfulclient==0.14.4
|
| 597 |
+
wadllib==1.3.6
|
| 598 |
+
cryptography==3.4.8
|
| 599 |
+
importlib_metadata==8.0.0
|
| 600 |
+
backports.tarfile==1.2.0
|
| 601 |
+
typeguard==4.3.0
|
| 602 |
+
packaging==24.1
|
| 603 |
+
typing_extensions==4.12.2
|
| 604 |
+
jaraco.collections==5.1.0
|
| 605 |
+
autocommand==2.2.2
|
| 606 |
+
wheel==0.43.0
|
| 607 |
+
platformdirs==4.2.2
|
| 608 |
+
tomli==2.0.1
|
| 609 |
+
importlib_resources==6.4.0
|
| 610 |
+
jaraco.functools==4.0.1
|
| 611 |
+
jaraco.context==5.3.0
|
| 612 |
+
zipp==3.19.2
|
| 613 |
+
more-itertools==10.3.0
|
| 614 |
+
jaraco.text==3.12.1
|
| 615 |
+
inflect==7.3.1
|
wandb/run-20250216_113712-ypm5ne5j/files/wandb-metadata.json
ADDED
|
@@ -0,0 +1,37 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"os": "Linux-6.1.85+-x86_64-with-glibc2.35",
|
| 3 |
+
"python": "CPython 3.11.11",
|
| 4 |
+
"startedAt": "2025-02-16T11:37:13.201201Z",
|
| 5 |
+
"program": "DiagnosisPredictor.ipynb",
|
| 6 |
+
"email": "drsyedfaizan1987@gmail.com",
|
| 7 |
+
"root": "/content",
|
| 8 |
+
"host": "697d7dc81256",
|
| 9 |
+
"executable": "/usr/bin/python3",
|
| 10 |
+
"colab": "https://colab.research.google.com/notebook#fileId=1H0jGicwNpMGoUFXTDmKWpvq0U2xvekLG",
|
| 11 |
+
"cpu_count": 6,
|
| 12 |
+
"cpu_count_logical": 12,
|
| 13 |
+
"gpu": "NVIDIA A100-SXM4-40GB",
|
| 14 |
+
"gpu_count": 1,
|
| 15 |
+
"disk": {
|
| 16 |
+
"/": {
|
| 17 |
+
"total": "120942624768",
|
| 18 |
+
"used": "31777460224"
|
| 19 |
+
}
|
| 20 |
+
},
|
| 21 |
+
"memory": {
|
| 22 |
+
"total": "89632796672"
|
| 23 |
+
},
|
| 24 |
+
"cpu": {
|
| 25 |
+
"count": 6,
|
| 26 |
+
"countLogical": 12
|
| 27 |
+
},
|
| 28 |
+
"gpu_nvidia": [
|
| 29 |
+
{
|
| 30 |
+
"name": "NVIDIA A100-SXM4-40GB",
|
| 31 |
+
"memoryTotal": "42949672960",
|
| 32 |
+
"cudaCores": 6912,
|
| 33 |
+
"architecture": "Ampere"
|
| 34 |
+
}
|
| 35 |
+
],
|
| 36 |
+
"cudaVersion": "12.4"
|
| 37 |
+
}
|
wandb/run-20250216_113712-ypm5ne5j/logs/debug-core.log
ADDED
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@@ -0,0 +1,6 @@
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| 1 |
+
{"time":"2025-02-16T11:37:13.142848876Z","level":"INFO","msg":"main: starting server","port-filename":"/tmp/tmpijry80e6/port-424.txt","pid":424,"log-level":0,"disable-analytics":false,"shutdown-on-parent-exit":false}
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| 2 |
+
{"time":"2025-02-16T11:37:13.14727149Z","level":"INFO","msg":"Will exit if parent process dies.","ppid":424}
|
| 3 |
+
{"time":"2025-02-16T11:37:13.147383449Z","level":"INFO","msg":"server is running","addr":{"IP":"127.0.0.1","Port":43451,"Zone":""}}
|
| 4 |
+
{"time":"2025-02-16T11:37:13.192212515Z","level":"INFO","msg":"connection: ManageConnectionData: new connection created","id":"127.0.0.1:52898"}
|
| 5 |
+
{"time":"2025-02-16T11:37:13.202961759Z","level":"INFO","msg":"handleInformInit: received","streamId":"ypm5ne5j","id":"127.0.0.1:52898"}
|
| 6 |
+
{"time":"2025-02-16T11:37:13.310348007Z","level":"INFO","msg":"handleInformInit: stream started","streamId":"ypm5ne5j","id":"127.0.0.1:52898"}
|
wandb/run-20250216_113712-ypm5ne5j/logs/debug-internal.log
ADDED
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@@ -0,0 +1,59 @@
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| 1 |
+
{"time":"2025-02-16T11:37:13.203113118Z","level":"INFO","msg":"stream: starting","core version":"0.19.6","symlink path":"/content/wandb/run-20250216_113712-ypm5ne5j/logs/debug-core.log"}
|
| 2 |
+
{"time":"2025-02-16T11:37:13.310296735Z","level":"INFO","msg":"created new stream","id":"ypm5ne5j"}
|
| 3 |
+
{"time":"2025-02-16T11:37:13.310341207Z","level":"INFO","msg":"stream: started","id":"ypm5ne5j"}
|
| 4 |
+
{"time":"2025-02-16T11:37:13.310368478Z","level":"INFO","msg":"writer: Do: started","stream_id":"ypm5ne5j"}
|
| 5 |
+
{"time":"2025-02-16T11:37:13.310522121Z","level":"INFO","msg":"handler: started","stream_id":"ypm5ne5j"}
|
| 6 |
+
{"time":"2025-02-16T11:37:13.310555821Z","level":"INFO","msg":"sender: started","stream_id":"ypm5ne5j"}
|
| 7 |
+
{"time":"2025-02-16T11:37:13.57563722Z","level":"INFO","msg":"Starting system monitor"}
|
| 8 |
+
{"time":"2025-02-16T11:38:48.230013602Z","level":"INFO","msg":"Pausing system monitor"}
|
| 9 |
+
{"time":"2025-02-16T11:39:39.363077937Z","level":"INFO","msg":"Resuming system monitor"}
|
| 10 |
+
{"time":"2025-02-16T11:39:41.894171188Z","level":"INFO","msg":"Pausing system monitor"}
|
| 11 |
+
{"time":"2025-02-16T11:39:54.593959928Z","level":"INFO","msg":"Resuming system monitor"}
|
| 12 |
+
{"time":"2025-02-16T11:39:56.811973137Z","level":"INFO","msg":"Pausing system monitor"}
|
| 13 |
+
{"time":"2025-02-16T11:41:06.824737344Z","level":"INFO","msg":"Resuming system monitor"}
|
| 14 |
+
{"time":"2025-02-16T11:41:07.752589846Z","level":"INFO","msg":"Pausing system monitor"}
|
| 15 |
+
{"time":"2025-02-16T11:42:12.192009247Z","level":"INFO","msg":"Resuming system monitor"}
|
| 16 |
+
{"time":"2025-02-16T11:42:12.283338284Z","level":"INFO","msg":"Pausing system monitor"}
|
| 17 |
+
{"time":"2025-02-16T11:42:41.350463962Z","level":"INFO","msg":"Resuming system monitor"}
|
| 18 |
+
{"time":"2025-02-16T11:42:41.351631132Z","level":"INFO","msg":"Pausing system monitor"}
|
| 19 |
+
{"time":"2025-02-16T11:53:23.916312558Z","level":"INFO","msg":"Resuming system monitor"}
|
| 20 |
+
{"time":"2025-02-16T11:53:23.959638233Z","level":"INFO","msg":"Pausing system monitor"}
|
| 21 |
+
{"time":"2025-02-16T11:54:40.152995725Z","level":"INFO","msg":"Resuming system monitor"}
|
| 22 |
+
{"time":"2025-02-16T11:54:43.075039915Z","level":"INFO","msg":"Pausing system monitor"}
|
| 23 |
+
{"time":"2025-02-16T11:54:47.046873779Z","level":"INFO","msg":"Resuming system monitor"}
|
| 24 |
+
{"time":"2025-02-16T11:54:47.451262319Z","level":"INFO","msg":"Pausing system monitor"}
|
| 25 |
+
{"time":"2025-02-16T11:55:29.495399044Z","level":"INFO","msg":"Resuming system monitor"}
|
| 26 |
+
{"time":"2025-02-16T11:55:33.323768484Z","level":"INFO","msg":"Pausing system monitor"}
|
| 27 |
+
{"time":"2025-02-16T11:55:43.660000555Z","level":"INFO","msg":"Resuming system monitor"}
|
| 28 |
+
{"time":"2025-02-16T11:55:45.972122336Z","level":"INFO","msg":"Pausing system monitor"}
|
| 29 |
+
{"time":"2025-02-16T11:55:51.874951337Z","level":"INFO","msg":"Resuming system monitor"}
|
| 30 |
+
{"time":"2025-02-16T11:55:51.924534755Z","level":"INFO","msg":"Pausing system monitor"}
|
| 31 |
+
{"time":"2025-02-16T11:56:38.941974077Z","level":"INFO","msg":"Resuming system monitor"}
|
| 32 |
+
{"time":"2025-02-16T11:56:39.033349828Z","level":"INFO","msg":"Pausing system monitor"}
|
| 33 |
+
{"time":"2025-02-16T11:57:37.134643021Z","level":"INFO","msg":"Resuming system monitor"}
|
| 34 |
+
{"time":"2025-02-16T11:57:37.174702019Z","level":"INFO","msg":"Pausing system monitor"}
|
| 35 |
+
{"time":"2025-02-16T11:57:56.326580512Z","level":"INFO","msg":"Resuming system monitor"}
|
| 36 |
+
{"time":"2025-02-16T11:57:56.366694865Z","level":"INFO","msg":"Pausing system monitor"}
|
| 37 |
+
{"time":"2025-02-16T11:58:22.002434393Z","level":"INFO","msg":"Resuming system monitor"}
|
| 38 |
+
{"time":"2025-02-16T11:58:22.005014763Z","level":"INFO","msg":"Pausing system monitor"}
|
| 39 |
+
{"time":"2025-02-16T11:58:46.666815014Z","level":"INFO","msg":"Resuming system monitor"}
|
| 40 |
+
{"time":"2025-02-16T11:58:46.707699134Z","level":"INFO","msg":"Pausing system monitor"}
|
| 41 |
+
{"time":"2025-02-16T11:59:06.144104823Z","level":"INFO","msg":"Resuming system monitor"}
|
| 42 |
+
{"time":"2025-02-16T11:59:06.184688106Z","level":"INFO","msg":"Pausing system monitor"}
|
| 43 |
+
{"time":"2025-02-16T11:59:33.234535747Z","level":"INFO","msg":"Resuming system monitor"}
|
| 44 |
+
{"time":"2025-02-16T11:59:33.274699837Z","level":"INFO","msg":"Pausing system monitor"}
|
| 45 |
+
{"time":"2025-02-16T12:00:42.093946696Z","level":"INFO","msg":"Resuming system monitor"}
|
| 46 |
+
{"time":"2025-02-16T12:00:44.510320305Z","level":"INFO","msg":"Pausing system monitor"}
|
| 47 |
+
{"time":"2025-02-16T12:00:46.116547873Z","level":"INFO","msg":"Resuming system monitor"}
|
| 48 |
+
{"time":"2025-02-16T12:00:46.137061562Z","level":"INFO","msg":"Pausing system monitor"}
|
| 49 |
+
{"time":"2025-02-16T12:03:44.000976091Z","level":"INFO","msg":"Resuming system monitor"}
|
| 50 |
+
{"time":"2025-02-16T12:03:46.418849162Z","level":"INFO","msg":"Pausing system monitor"}
|
| 51 |
+
{"time":"2025-02-16T12:07:03.642233368Z","level":"INFO","msg":"Resuming system monitor"}
|
| 52 |
+
{"time":"2025-02-16T12:07:03.664948521Z","level":"INFO","msg":"Pausing system monitor"}
|
| 53 |
+
{"time":"2025-02-16T12:08:06.937381173Z","level":"INFO","msg":"Resuming system monitor"}
|
| 54 |
+
{"time":"2025-02-16T12:08:09.151566112Z","level":"INFO","msg":"Pausing system monitor"}
|
| 55 |
+
{"time":"2025-02-16T12:08:13.875342495Z","level":"INFO","msg":"Resuming system monitor"}
|
| 56 |
+
{"time":"2025-02-16T12:08:13.901174957Z","level":"INFO","msg":"Pausing system monitor"}
|
| 57 |
+
{"time":"2025-02-16T12:08:18.486956036Z","level":"INFO","msg":"Resuming system monitor"}
|
| 58 |
+
{"time":"2025-02-16T12:08:19.959282115Z","level":"INFO","msg":"Pausing system monitor"}
|
| 59 |
+
{"time":"2025-02-16T12:17:23.135555028Z","level":"INFO","msg":"Resuming system monitor"}
|
wandb/run-20250216_113712-ypm5ne5j/logs/debug.log
ADDED
|
@@ -0,0 +1,105 @@
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|
| 1 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_setup.py:_flush():68] Current SDK version is 0.19.6
|
| 2 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_setup.py:_flush():68] Configure stats pid to 424
|
| 3 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_setup.py:_flush():68] Loading settings from /root/.config/wandb/settings
|
| 4 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_setup.py:_flush():68] Loading settings from /content/wandb/settings
|
| 5 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_setup.py:_flush():68] Loading settings from environment variables
|
| 6 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_init.py:setup_run_log_directory():637] Logging user logs to /content/wandb/run-20250216_113712-ypm5ne5j/logs/debug.log
|
| 7 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_init.py:setup_run_log_directory():638] Logging internal logs to /content/wandb/run-20250216_113712-ypm5ne5j/logs/debug-internal.log
|
| 8 |
+
2025-02-16 11:37:12,772 INFO MainThread:424 [wandb_init.py:monkeypatch_ipython():589] configuring jupyter hooks <wandb.sdk.wandb_init._WandbInit object at 0x7b854f1c3f90>
|
| 9 |
+
2025-02-16 11:37:12,773 INFO MainThread:424 [wandb_init.py:init():756] calling init triggers
|
| 10 |
+
2025-02-16 11:37:12,773 INFO MainThread:424 [wandb_init.py:init():761] wandb.init called with sweep_config: {}
|
| 11 |
+
config: {'_wandb': {}}
|
| 12 |
+
2025-02-16 11:37:12,773 INFO MainThread:424 [wandb_init.py:init():789] starting backend
|
| 13 |
+
2025-02-16 11:37:13,192 INFO MainThread:424 [wandb_init.py:init():793] sending inform_init request
|
| 14 |
+
2025-02-16 11:37:13,200 INFO MainThread:424 [backend.py:_multiprocessing_setup():97] multiprocessing start_methods=fork,spawn,forkserver, using: spawn
|
| 15 |
+
2025-02-16 11:37:13,201 INFO MainThread:424 [wandb_init.py:init():808] backend started and connected
|
| 16 |
+
2025-02-16 11:37:13,207 INFO MainThread:424 [wandb_run.py:_label_probe_notebook():1196] probe notebook
|
| 17 |
+
2025-02-16 11:37:13,461 INFO MainThread:424 [wandb_init.py:init():901] updated telemetry
|
| 18 |
+
2025-02-16 11:37:13,462 INFO MainThread:424 [wandb_init.py:init():936] communicating run to backend with 90.0 second timeout
|
| 19 |
+
2025-02-16 11:37:13,572 INFO MainThread:424 [wandb_init.py:init():994] starting run threads in backend
|
| 20 |
+
2025-02-16 11:37:13,961 INFO MainThread:424 [wandb_run.py:_console_start():2385] atexit reg
|
| 21 |
+
2025-02-16 11:37:13,961 INFO MainThread:424 [wandb_run.py:_redirect():2235] redirect: wrap_raw
|
| 22 |
+
2025-02-16 11:37:13,961 INFO MainThread:424 [wandb_run.py:_redirect():2300] Wrapping output streams.
|
| 23 |
+
2025-02-16 11:37:13,962 INFO MainThread:424 [wandb_run.py:_redirect():2325] Redirects installed.
|
| 24 |
+
2025-02-16 11:37:13,967 INFO MainThread:424 [wandb_init.py:init():1036] run started, returning control to user process
|
| 25 |
+
2025-02-16 11:37:13,970 INFO MainThread:424 [wandb_run.py:_config_callback():1253] config_cb None None {'return_dict': True, 'output_hidden_states': False, 'output_attentions': False, 'torchscript': False, 'torch_dtype': None, 'use_bfloat16': False, 'tf_legacy_loss': False, 'pruned_heads': {}, 'tie_word_embeddings': True, 'chunk_size_feed_forward': 0, 'is_encoder_decoder': False, 'is_decoder': False, 'cross_attention_hidden_size': None, 'add_cross_attention': False, 'tie_encoder_decoder': False, 'max_length': 20, 'min_length': 0, 'do_sample': False, 'early_stopping': False, 'num_beams': 1, 'num_beam_groups': 1, 'diversity_penalty': 0.0, 'temperature': 1.0, 'top_k': 50, 'top_p': 1.0, 'typical_p': 1.0, 'repetition_penalty': 1.0, 'length_penalty': 1.0, 'no_repeat_ngram_size': 0, 'encoder_no_repeat_ngram_size': 0, 'bad_words_ids': None, 'num_return_sequences': 1, 'output_scores': False, 'return_dict_in_generate': False, 'forced_bos_token_id': None, 'forced_eos_token_id': None, 'remove_invalid_values': False, 'exponential_decay_length_penalty': None, 'suppress_tokens': None, 'begin_suppress_tokens': None, 'architectures': ['BertForMaskedLM'], 'finetuning_task': None, 'id2label': {0: 'LABEL_0', 1: 'LABEL_1', 2: 'LABEL_2', 3: 'LABEL_3', 4: 'LABEL_4', 5: 'LABEL_5', 6: 'LABEL_6', 7: 'LABEL_7', 8: 'LABEL_8', 9: 'LABEL_9', 10: 'LABEL_10', 11: 'LABEL_11', 12: 'LABEL_12', 13: 'LABEL_13', 14: 'LABEL_14', 15: 'LABEL_15', 16: 'LABEL_16', 17: 'LABEL_17', 18: 'LABEL_18', 19: 'LABEL_19'}, 'label2id': {'LABEL_0': 0, 'LABEL_1': 1, 'LABEL_2': 2, 'LABEL_3': 3, 'LABEL_4': 4, 'LABEL_5': 5, 'LABEL_6': 6, 'LABEL_7': 7, 'LABEL_8': 8, 'LABEL_9': 9, 'LABEL_10': 10, 'LABEL_11': 11, 'LABEL_12': 12, 'LABEL_13': 13, 'LABEL_14': 14, 'LABEL_15': 15, 'LABEL_16': 16, 'LABEL_17': 17, 'LABEL_18': 18, 'LABEL_19': 19}, 'tokenizer_class': None, 'prefix': None, 'bos_token_id': None, 'pad_token_id': 0, 'eos_token_id': None, 'sep_token_id': None, 'decoder_start_token_id': None, 'task_specific_params': None, 'problem_type': None, '_name_or_path': 'monologg/biobert_v1.1_pubmed', '_attn_implementation_autoset': True, 'transformers_version': '4.48.3', 'model_type': 'bert', 'vocab_size': 28996, 'hidden_size': 768, 'num_hidden_layers': 12, 'num_attention_heads': 12, 'hidden_act': 'gelu', 'intermediate_size': 3072, 'hidden_dropout_prob': 0.1, 'attention_probs_dropout_prob': 0.1, 'max_position_embeddings': 512, 'type_vocab_size': 2, 'initializer_range': 0.02, 'layer_norm_eps': 1e-12, 'position_embedding_type': 'absolute', 'use_cache': True, 'classifier_dropout': None, 'output_dir': './results', 'overwrite_output_dir': False, 'do_train': False, 'do_eval': True, 'do_predict': False, 'eval_strategy': 'epoch', 'prediction_loss_only': False, 'per_device_train_batch_size': 16, 'per_device_eval_batch_size': 16, 'per_gpu_train_batch_size': None, 'per_gpu_eval_batch_size': None, 'gradient_accumulation_steps': 2, 'eval_accumulation_steps': None, 'eval_delay': 0, 'torch_empty_cache_steps': None, 'learning_rate': 2e-05, 'weight_decay': 0.01, 'adam_beta1': 0.9, 'adam_beta2': 0.999, 'adam_epsilon': 1e-08, 'max_grad_norm': 1.0, 'num_train_epochs': 5, 'max_steps': -1, 'lr_scheduler_type': 'linear', 'lr_scheduler_kwargs': {}, 'warmup_ratio': 0.0, 'warmup_steps': 500, 'log_level': 'passive', 'log_level_replica': 'warning', 'log_on_each_node': True, 'logging_dir': './logs', 'logging_strategy': 'steps', 'logging_first_step': False, 'logging_steps': 10, 'logging_nan_inf_filter': True, 'save_strategy': 'epoch', 'save_steps': 500, 'save_total_limit': 3, 'save_safetensors': True, 'save_on_each_node': False, 'save_only_model': False, 'restore_callback_states_from_checkpoint': False, 'no_cuda': False, 'use_cpu': False, 'use_mps_device': False, 'seed': 42, 'data_seed': None, 'jit_mode_eval': False, 'use_ipex': False, 'bf16': False, 'fp16': False, 'fp16_opt_level': 'O1', 'half_precision_backend': 'auto', 'bf16_full_eval': False, 'fp16_full_eval': False, 'tf32': None, 'local_rank': 0, 'ddp_backend': None, 'tpu_num_cores': None, 'tpu_metrics_debug': False, 'debug': [], 'dataloader_drop_last': False, 'eval_steps': None, 'dataloader_num_workers': 0, 'dataloader_prefetch_factor': None, 'past_index': -1, 'run_name': './results', 'disable_tqdm': False, 'remove_unused_columns': True, 'label_names': None, 'load_best_model_at_end': True, 'metric_for_best_model': 'eval_loss', 'greater_is_better': False, 'ignore_data_skip': False, 'fsdp': [], 'fsdp_min_num_params': 0, 'fsdp_config': {'min_num_params': 0, 'xla': False, 'xla_fsdp_v2': False, 'xla_fsdp_grad_ckpt': False}, 'fsdp_transformer_layer_cls_to_wrap': None, 'accelerator_config': {'split_batches': False, 'dispatch_batches': None, 'even_batches': True, 'use_seedable_sampler': True, 'non_blocking': False, 'gradient_accumulation_kwargs': None}, 'deepspeed': None, 'label_smoothing_factor': 0.0, 'optim': 'adamw_torch', 'optim_args': None, 'adafactor': False, 'group_by_length': False, 'length_column_name': 'length', 'report_to': ['tensorboard', 'wandb'], 'ddp_find_unused_parameters': None, 'ddp_bucket_cap_mb': None, 'ddp_broadcast_buffers': None, 'dataloader_pin_memory': True, 'dataloader_persistent_workers': False, 'skip_memory_metrics': True, 'use_legacy_prediction_loop': False, 'push_to_hub': False, 'resume_from_checkpoint': None, 'hub_model_id': None, 'hub_strategy': 'every_save', 'hub_token': '<HUB_TOKEN>', 'hub_private_repo': None, 'hub_always_push': False, 'gradient_checkpointing': False, 'gradient_checkpointing_kwargs': None, 'include_inputs_for_metrics': False, 'include_for_metrics': [], 'eval_do_concat_batches': True, 'fp16_backend': 'auto', 'evaluation_strategy': 'epoch', 'push_to_hub_model_id': None, 'push_to_hub_organization': None, 'push_to_hub_token': '<PUSH_TO_HUB_TOKEN>', 'mp_parameters': '', 'auto_find_batch_size': False, 'full_determinism': False, 'torchdynamo': None, 'ray_scope': 'last', 'ddp_timeout': 1800, 'torch_compile': False, 'torch_compile_backend': None, 'torch_compile_mode': None, 'dispatch_batches': None, 'split_batches': None, 'include_tokens_per_second': False, 'include_num_input_tokens_seen': False, 'neftune_noise_alpha': None, 'optim_target_modules': None, 'batch_eval_metrics': False, 'eval_on_start': False, 'use_liger_kernel': False, 'eval_use_gather_object': False, 'average_tokens_across_devices': False}
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2025-02-16 11:37:13,973 INFO MainThread:424 [wandb_config.py:__setitem__():154] config set model/num_parameters = 108325652 - <bound method Run._config_callback of <wandb.sdk.wandb_run.Run object at 0x7b854e7497d0>>
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wandb/run-20250216_113712-ypm5ne5j/run-ypm5ne5j.wandb
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