"""HF-Hub-compatible model for Stoicheia-tagger-parser (JointModel: tagger + biaffine parser). Self-contained: vendors the transformer primitives (RMSNorm/RoPE/Attention/GeGLU/Block/ build_attn_mask) verbatim from modeling_char_bert.py, plus the tagger/parser primitives (pool_words, MLP, Biaffine) verbatim from tagger/model.py and parser/biaffine.py. SDPA-only attention path (same portability tradeoff as the base CharBertModel wrapper). Architecture mirrors, exactly, the original training-time module tree so a real checkpoint's state dict loads with strict=True (this is the acid test the conversion script relies on): tagger.encoder.* CharBertEncoder (+ a fine-tune-only `cap_emb` channel) tagger.mix_w (depth+1,) ELMo-style scalar-mix weights over layer outputs tagger.xpos_heads.{0..8} 9 factored XPOS position heads tagger.head_flat flat full-XPOS-tag head (attested tags only) tagger.head_script lemma edit-script head tagger.head_upos UPOS head biaffine.root learnable ROOT vector (head-candidate column 0) biaffine.{arc,rel}_{dep,head} MLPs projecting pooled word vectors for arc/label scoring biaffine.{arc,rel}_biaf bilinear (Dozat & Manning) scorers One notable, documented simplification vs. the original training code: the original packs several sentences into shared, fixed-length rows for compute efficiency during training/eval (tagger/dataset.py's pack_rows + parser/joint_model.py's JointModel._regroup step, which un-packs pooled word vectors back into one (n_sent, max_w, D) tensor per sentence before the biaffine head). For a standalone inference wrapper there is no efficiency reason to pack multiple sentences per row, so this module processes exactly one sentence per batch row -- this makes the `_regroup` step an identity (sent_ids = range(B), no gather needed) while remaining architecturally identical: forward() still pools per-character hidden states into per-word vectors via a `word_id` tensor, exactly as during training, before every head. """ from __future__ import annotations from dataclasses import dataclass from typing import Optional import torch import torch.nn as nn import torch.nn.functional as F from transformers import PreTrainedModel from transformers.modeling_outputs import ModelOutput from .configuration_char_bert_joint import CharBertJointConfig # ============================================================================================ # Vendored CharBertEncoder primitives (verbatim from modeling_char_bert.py) # ============================================================================================ class RMSNorm(nn.Module): def __init__(self, d, eps=1e-6): super().__init__() self.w = nn.Parameter(torch.ones(d)) self.eps = eps def forward(self, x): x = x * torch.rsqrt(x.pow(2).mean(-1, keepdim=True) + self.eps) return x * self.w class RoPE(nn.Module): def __init__(self, dim, base=10000.0): super().__init__() self.dim = dim self.base = base def cos_sin(self, pos): # Recomputed on every call rather than cached in a registered buffer: a # persistent=False buffer is never covered by the checkpoint's state dict, # so it depends entirely on __init__-time materialization -- which some # transformers versions' meta-device/low_cpu_mem_usage loading path can # skip, silently leaving this tensor uninitialized. Recomputing here is # immune to that regardless of how the model was constructed/loaded. inv = 1.0 / (self.base ** (torch.arange(0, self.dim, 2, device=pos.device).float() / self.dim)) f = torch.outer(pos.float(), inv) emb = torch.cat([f, f], -1) return emb.cos(), emb.sin() def _rotate_half(x): d = x.shape[-1] // 2 return torch.cat([-x[..., d:], x[..., :d]], -1) def apply_rope(q, k, cos, sin): cos = cos[None, None] sin = sin[None, None] return q * cos + _rotate_half(q) * sin, k * cos + _rotate_half(k) * sin class Attention(nn.Module): def __init__(self, d, n_heads, rope: RoPE, qk_norm=False): super().__init__() self.h = n_heads self.dh = d // n_heads self.qkv = nn.Linear(d, 3 * d, bias=False) self.o = nn.Linear(d, d, bias=False) self.rope = rope self.qk_norm = qk_norm if qk_norm: self.q_norm = RMSNorm(self.dh) self.k_norm = RMSNorm(self.dh) def forward(self, x, pos, attn_mask): B, T, D = x.shape qkv = self.qkv(x).view(B, T, 3, self.h, self.dh).permute(2, 0, 3, 1, 4) q, k, v = qkv[0], qkv[1], qkv[2] if self.qk_norm: q, k = self.q_norm(q), self.k_norm(k) cos, sin = self.rope.cos_sin(pos) cos, sin = cos.to(x.dtype), sin.to(x.dtype) q, k = apply_rope(q, k, cos, sin) out = F.scaled_dot_product_attention(q, k, v, attn_mask=attn_mask) out = out.transpose(1, 2).reshape(B, T, D) return self.o(out) class GeGLU(nn.Module): def __init__(self, d, mult=8 / 3): super().__init__() hidden = int(d * mult) hidden = (hidden + 63) // 64 * 64 self.wi = nn.Linear(d, 2 * hidden, bias=False) self.wo = nn.Linear(hidden, d, bias=False) def forward(self, x): a, b = self.wi(x).chunk(2, -1) return self.wo(F.gelu(a) * b) class Block(nn.Module): def __init__(self, d, n_heads, rope, window=0, qk_norm=False): super().__init__() self.n1 = RMSNorm(d) self.attn = Attention(d, n_heads, rope, qk_norm=qk_norm) self.n2 = RMSNorm(d) self.mlp = GeGLU(d) self.window = window # 0 = global; >0 = local sliding window (characters) def forward(self, x, pos, base_mask): x = x + self.attn(self.n1(x), pos, base_mask) x = x + self.mlp(self.n2(x)) return x def build_attn_mask(seg_id, window, device, dtype): """Additive mask (B,1,T,T): same-segment AND (window==0 or |i-j| 0: idx = torch.arange(T, device=device) near = (idx[None, :] - idx[:, None]).abs() < window same = same & near[None] mask = torch.zeros(B, 1, T, T, dtype=dtype, device=device) mask.masked_fill_(~same[:, None], float("-inf")) return mask # ============================================================================================ # Vendored tagger/parser primitives (verbatim from tagger/model.py and parser/biaffine.py) # ============================================================================================ def pool_words(hidden, word_id, W, mode="mean"): """hidden (B,T,D), word_id (B,T) in [-1,W) -> (B,W,D).""" B, T, D = hidden.shape flat = hidden.reshape(B * T, D) wid = word_id.reshape(B * T) valid = wid >= 0 off = (torch.arange(B, device=hidden.device) * W).repeat_interleave(T) idx = (wid + off)[valid] out = hidden.new_zeros(B * W, D) if mode == "mean": out.index_add_(0, idx, flat[valid]) cnt = hidden.new_zeros(B * W).index_add_( 0, idx, torch.ones_like(idx, dtype=hidden.dtype)) out = out / cnt.clamp(min=1).unsqueeze(-1) elif mode == "last": out.index_copy_(0, idx, flat[valid]) # spans are contiguous: last write = last char else: raise ValueError(mode) return out.reshape(B, W, D) class MLP(nn.Module): def __init__(self, d_in, d_out, dropout=0.33): super().__init__() self.lin = nn.Linear(d_in, d_out) self.act = nn.LeakyReLU(0.1) self.drop = nn.Dropout(dropout) def forward(self, x): return self.drop(self.act(self.lin(x))) class Biaffine(nn.Module): """s(x,y) = [x;1]^T W [y;1] (per output channel). x:(B,Lx,Di) y:(B,Ly,Di) -> (B,n_out,Lx,Ly).""" def __init__(self, d_in, n_out=1, bias_x=True, bias_y=True): super().__init__() self.bias_x, self.bias_y = bias_x, bias_y self.W = nn.Parameter(torch.zeros(n_out, d_in + int(bias_x), d_in + int(bias_y))) nn.init.xavier_uniform_(self.W) def forward(self, x, y): if self.bias_x: x = torch.cat([x, torch.ones_like(x[..., :1])], -1) if self.bias_y: y = torch.cat([y, torch.ones_like(y[..., :1])], -1) s = torch.einsum("bxi,oij,byj->boxy", x, self.W, y) return s.squeeze(1) if s.shape[1] == 1 else s # ============================================================================================ # Encoder (CharBertEncoder + fine-tune-only cap_emb), lives at `model.tagger.encoder.*` # ============================================================================================ class _Encoder(nn.Module): def __init__(self, config: CharBertJointConfig): super().__init__() self.e_char = nn.Embedding(config.n_char_ids, config.d_model) self.e_bnd = nn.Embedding(config.n_boundary, config.d_model) self.e_dia = nn.Embedding(config.n_dia, config.d_model) self.e_punct = nn.Embedding(config.n_punct, config.d_model) rope = RoPE(config.d_model // config.n_heads) blocks = [] for i in range(config.depth): win = 0 if i % 4 == 3 else config.char_window # 3 local : 1 global blocks.append(Block(config.d_model, config.n_heads, rope, window=win, qk_norm=config.qk_norm)) self.blocks = nn.ModuleList(blocks) self.norm_out = RMSNorm(config.d_model) self.head_char = nn.Linear(config.d_model, config.n_char_ids, bias=False) self.head_bnd = nn.Linear(config.d_model, 3, bias=False) self.head_dia = nn.Linear(config.d_model, 48, bias=False) self.head_cap = nn.Linear(config.d_model, 2, bias=False) self.head_punct = nn.Linear(config.d_model, 6, bias=False) if config.use_cap: # fine-tune-only additive capitalization channel (pretraining treats cap as # output-only); zero-init so loading a pretraining checkpoint would be a no-op. self.cap_emb = nn.Embedding(2, config.d_model) def forward(self, input_ids, boundary, dia, punct, cap=None, seg_id=None): B, T = input_ids.shape pos = torch.arange(T, device=input_ids.device) seg = seg_id if seg_id is not None else torch.zeros(B, T, dtype=torch.long, device=input_ids.device) x = self.e_char(input_ids) + self.e_bnd(boundary) + self.e_dia(dia) + self.e_punct(punct) cap_emb = getattr(self, "cap_emb", None) if cap_emb is not None and cap is not None: x = x + cap_emb(cap) char_window = None for blk in self.blocks: if blk.window == 0: continue char_window = blk.window break if char_window is None: char_window = 0 attn_mask = build_attn_mask(seg, char_window, input_ids.device, x.dtype) glob_mask = build_attn_mask(seg, 0, input_ids.device, x.dtype) layers = [] for blk in self.blocks: m = glob_mask if blk.window == 0 else attn_mask x = blk(x, pos, m) layers.append(x) hidden = self.norm_out(x) return dict( layers=tuple(layers), hidden=hidden, char=self.head_char(hidden), boundary=self.head_bnd(hidden), dia=self.head_dia(hidden), cap=self.head_cap(hidden), punct=self.head_punct(hidden), ) # ============================================================================================ # Tagger head bundle: lives at `model.tagger.*` # ============================================================================================ class _Tagger(nn.Module): def __init__(self, config: CharBertJointConfig): super().__init__() self.encoder = _Encoder(config) self.mix_w = nn.Parameter(torch.zeros(config.depth + 1)) self.dropout = nn.Dropout(config.head_dropout) self.xpos_heads = nn.ModuleList( [nn.Linear(config.d_model, n, bias=False) for n in config.n_xpos_classes]) self.head_flat = (nn.Linear(config.d_model, config.n_flat_tags, bias=False) if config.use_flat else None) self.head_script = nn.Linear(config.d_model, config.n_script, bias=False) self.head_upos = nn.Linear(config.d_model, config.n_upos, bias=False) # ============================================================================================ # Biaffine parser head: lives at `model.biaffine.*` # ============================================================================================ class _BiaffineHead(nn.Module): def __init__(self, config: CharBertJointConfig): super().__init__() d = config.d_model self.root = nn.Parameter(torch.zeros(d)) self.arc_dep = MLP(d, config.d_arc, config.parse_dropout) self.arc_head = MLP(d, config.d_arc, config.parse_dropout) self.rel_dep = MLP(d, config.d_rel, config.parse_dropout) self.rel_head = MLP(d, config.d_rel, config.parse_dropout) self.arc_biaf = Biaffine(config.d_arc, n_out=1, bias_x=True, bias_y=False) self.rel_biaf = Biaffine(config.d_rel, n_out=config.n_labels, bias_x=True, bias_y=True) def forward(self, w, word_mask): """w: (B,W,D) word vectors. word_mask: (B,W) bool, True at real words. Returns arc_scores (B,W,W+1) [col0=root], rel_scores (B,W,W+1,n_labels).""" B, W, D = w.shape root = self.root.view(1, 1, D).expand(B, 1, D) heads_in = torch.cat([root, w], 1) # (B,W+1,D): col0=root h_dep_arc = self.arc_dep(w) # (B,W,d_arc) h_head_arc = self.arc_head(heads_in) # (B,W+1,d_arc) arc_scores = self.arc_biaf(h_dep_arc, h_head_arc) # (B,W,W+1) # mask: dependent i cannot pick itself as head (col i+1), and padded cols get -inf pad_head = torch.cat([torch.ones(B, 1, dtype=torch.bool, device=w.device), word_mask], 1) arc_scores = arc_scores.masked_fill(~pad_head[:, None, :], float("-inf")) self_idx = torch.arange(W, device=w.device) arc_scores = arc_scores.clone() arc_scores[:, self_idx, self_idx + 1] = float("-inf") h_dep_rel = self.rel_dep(w) # (B,W,d_rel) h_head_rel = self.rel_head(heads_in) # (B,W+1,d_rel) rel_scores = self.rel_biaf(h_dep_rel, h_head_rel) # (B,n_labels,W,W+1) rel_scores = rel_scores.permute(0, 2, 3, 1) # (B,W,W+1,n_labels) return arc_scores, rel_scores @torch.no_grad() def decode(self, arc_scores, rel_scores): """Greedy per-token argmax head (col 0=root) + label argmax at the chosen head.""" heads_out = arc_scores.argmax(-1) # (B,W) in [0..W], 0=root B, W = heads_out.shape bi = torch.arange(B, device=arc_scores.device)[:, None].expand(B, W) wi = torch.arange(W, device=arc_scores.device)[None, :].expand(B, W) labels_out = rel_scores[bi, wi, heads_out].argmax(-1) return heads_out.cpu(), labels_out.cpu() # ============================================================================================ # Output dataclass # ============================================================================================ @dataclass class CharBertJointOutput(ModelOutput): xpos_logits: Optional[tuple] = None # tuple of 9 (B,W,|A_p|) tensors script_logits: torch.FloatTensor = None # (B,W,n_script) upos_logits: torch.FloatTensor = None # (B,W,n_upos) flat_logits: Optional[torch.FloatTensor] = None # (B,W,n_flat_tags) arc_scores: Optional[torch.FloatTensor] = None # (B,W,W+1), col0 = root rel_scores: Optional[torch.FloatTensor] = None # (B,W,W+1,n_labels) word_mask: Optional[torch.BoolTensor] = None # (B,W) hidden_states: Optional[tuple] = None # ============================================================================================ # Top-level model # ============================================================================================ class CharBertForTaggingAndParsing(PreTrainedModel): config_class = CharBertJointConfig def __init__(self, config: CharBertJointConfig): super().__init__(config) self.tagger = _Tagger(config) self.biaffine = _BiaffineHead(config) self.post_init() def _init_weights(self, module): if isinstance(module, nn.Linear): nn.init.normal_(module.weight, std=0.02) if module.bias is not None: nn.init.zeros_(module.bias) elif isinstance(module, nn.Embedding): nn.init.normal_(module.weight, std=0.02) def forward( self, input_ids: torch.LongTensor, boundary: torch.LongTensor, dia: torch.LongTensor, punct: torch.LongTensor, word_id: torch.LongTensor, cap: Optional[torch.LongTensor] = None, seg_id: Optional[torch.LongTensor] = None, return_dict: bool = True, **kwargs, ): cfg = self.config enc_out = self.tagger.encoder(input_ids, boundary, dia, punct, cap=cap, seg_id=seg_id) layers = (*enc_out["layers"], enc_out["hidden"]) # depth raw block outs + 1 normed final B, T = input_ids.shape device = input_ids.device W = int(word_id.max().item()) + 1 if word_id.numel() and bool((word_id >= 0).any()) else 0 if W == 0: # degenerate: no encodable words anywhere in the batch w = input_ids.new_zeros(B, 0, cfg.d_model, dtype=layers[0].dtype) word_mask = torch.zeros(B, 0, dtype=torch.bool, device=device) else: pooled = torch.stack( [pool_words(h, word_id, W, cfg.pool) for h in layers]) # (L+1,B,W,D) mix = torch.softmax(self.tagger.mix_w, 0) w = torch.einsum("l,lbwd->bwd", mix.to(pooled.dtype), pooled) # (B,W,D), no dropout valid = word_id >= 0 cnt = torch.zeros(B, W, device=device, dtype=torch.float32) if bool(valid.any()): idx_b = torch.arange(B, device=device).unsqueeze(1).expand(B, T)[valid] idx_w = word_id[valid] cnt.index_put_((idx_b, idx_w), torch.ones_like(idx_w, dtype=torch.float32), accumulate=True) word_mask = cnt > 0 # tag heads see a dropped-out copy (a no-op in eval mode); the biaffine head sees the # raw pooled `w`, exactly as parser.joint_model.JointModel separates the two (dropout is # applied inside TaggerModel._tag_heads on a *local* copy, never touching the tensor # that JointModel._regroup / BiaffineHead consume). w_drop = self.tagger.dropout(w) xpos_logits = tuple(hd(w_drop) for hd in self.tagger.xpos_heads) script_logits = self.tagger.head_script(w_drop) upos_logits = self.tagger.head_upos(w_drop) flat_logits = self.tagger.head_flat(w_drop) if self.tagger.head_flat is not None else None if W > 0: arc_scores, rel_scores = self.biaffine(w, word_mask) else: arc_scores, rel_scores = None, None if not return_dict: return (xpos_logits, script_logits, upos_logits, flat_logits, arc_scores, rel_scores, word_mask) return CharBertJointOutput( xpos_logits=xpos_logits, script_logits=script_logits, upos_logits=upos_logits, flat_logits=flat_logits, arc_scores=arc_scores, rel_scores=rel_scores, word_mask=word_mask, hidden_states=layers, )