kevinhyj commited on
Commit ·
9b4b5b0
1
Parent(s): 1acb799
Add unified PhaseFlow checkpoint
Browse files- PhaseFlow.pt +3 -0
- README.md +31 -0
PhaseFlow.pt
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:7fb0091e6dd5a85bd3a6be7a0b606501700c4b8f28ff9b6e309267835a2fdff0
|
| 3 |
+
size 340953234
|
README.md
CHANGED
|
@@ -1,3 +1,34 @@
|
|
| 1 |
---
|
| 2 |
license: apache-2.0
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 3 |
---
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
---
|
| 2 |
license: apache-2.0
|
| 3 |
+
library_name: pytorch
|
| 4 |
+
tags:
|
| 5 |
+
- protein
|
| 6 |
+
- peptide
|
| 7 |
+
- llps
|
| 8 |
+
- dpr
|
| 9 |
---
|
| 10 |
+
|
| 11 |
+
# PhaseFlow checkpoint
|
| 12 |
+
|
| 13 |
+
This repository provides the PhaseFlow runtime checkpoint used for peptide
|
| 14 |
+
phase prediction, full-length protein LLPS prediction, and droplet-promoting
|
| 15 |
+
region (DPR) localization.
|
| 16 |
+
|
| 17 |
+
## Files
|
| 18 |
+
|
| 19 |
+
| File | Description | SHA256 |
|
| 20 |
+
| --- | --- | --- |
|
| 21 |
+
| `PhaseFlow.pt` | Combined PhaseFlow runtime checkpoint (peptide, full-protein, and DPR weights) | `7fb0091e6dd5a85bd3a6be7a0b606501700c4b8f28ff9b6e309267835a2fdff0` |
|
| 22 |
+
|
| 23 |
+
Download it with:
|
| 24 |
+
|
| 25 |
+
```bash
|
| 26 |
+
hf download yanjiehuang/PhaseFlow PhaseFlow.pt --local-dir artifacts/models
|
| 27 |
+
```
|
| 28 |
+
|
| 29 |
+
The checkpoint is loaded by the public PhaseFlow codebase. It contains the
|
| 30 |
+
embedded peptide PhaseFlow state, the full-protein CondenGT state, and the DPR
|
| 31 |
+
stack state; it is not a peptide-only checkpoint.
|
| 32 |
+
|
| 33 |
+
See the [PhaseFlow GitHub repository](https://github.com/kevinhyj/PhaseFlow)
|
| 34 |
+
for installation and inference workflows.
|