| # Config for sampling symmetric assemblies. | |
| defaults: | |
| - base | |
| inference: | |
| # Symmetry to sample | |
| # Available symmetries: | |
| # - Cyclic symmetry (C_n) # call as c5 | |
| # - Dihedral symmetry (D_n) # call as d5 | |
| # - Tetrahedral symmetry # call as tetrahedral | |
| # - Octahedral symmetry # call as octahedral | |
| # - Icosahedral symmetry # call as icosahedral | |
| symmetry: c2 | |
| # Set to true for computational efficiency | |
| # to avoid memory overhead of modeling all subunits. | |
| model_only_neighbors: False | |
| # Output directory of samples. | |
| output_prefix: samples/c2 | |
| contigmap: | |
| # Specify a single integer value to sample unconditionally. | |
| # Must be evenly divisible by the number of chains in the symmetry. | |
| contigs: ['100'] | |