Text Classification
Transformers
PyTorch
bert
protein language model
biology
text-embeddings-inference
Instructions to use GleghornLab/SYNTERACT with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- Transformers
How to use GleghornLab/SYNTERACT with Transformers:
# Use a pipeline as a high-level helper from transformers import pipeline pipe = pipeline("text-classification", model="GleghornLab/SYNTERACT")# Load model directly from transformers import AutoTokenizer, AutoModelForSequenceClassification tokenizer = AutoTokenizer.from_pretrained("GleghornLab/SYNTERACT") model = AutoModelForSequenceClassification.from_pretrained("GleghornLab/SYNTERACT") - Notebooks
- Google Colab
- Kaggle
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README.md
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The [Gleghorn lab](https://www.gleghornlab.com/) is an interdiciplinary research group at the University of Delaware that focuses on solving translational problems with our expertise in engineering, biology, and chemistry. We develop inexpensive and reliable tools to study organ development, maternal-fetal health, and drug delivery. Recently we have begun exploration into protein language models and strive to make protein design and annotation accessible.
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## Please cite
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@article {
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author = {Logan Hallee and Jason P. Gleghorn},
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title = {Protein-Protein Interaction Prediction is Achievable with Large Language Models},
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elocation-id = {2023.06.07.544109},
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year = {2023},
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doi = {10.1101/2023.06.07.544109},
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publisher = {Cold Spring Harbor Laboratory},
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The [Gleghorn lab](https://www.gleghornlab.com/) is an interdiciplinary research group at the University of Delaware that focuses on solving translational problems with our expertise in engineering, biology, and chemistry. We develop inexpensive and reliable tools to study organ development, maternal-fetal health, and drug delivery. Recently we have begun exploration into protein language models and strive to make protein design and annotation accessible.
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## Please cite
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@article {Hallee_ppi_2023,
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author = {Logan Hallee and Jason P. Gleghorn},
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title = {Protein-Protein Interaction Prediction is Achievable with Large Language Models},
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year = {2023},
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doi = {10.1101/2023.06.07.544109},
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publisher = {Cold Spring Harbor Laboratory},
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