IRIS-FLOWER-CLASSIFICATION-using-machine-learning-models / transformers /examples /pytorch /question-answering /run_qa_no_trainer.py
| #!/usr/bin/env python | |
| # coding=utf-8 | |
| # Copyright 2021 The HuggingFace Inc. team. All rights reserved. | |
| # | |
| # Licensed under the Apache License, Version 2.0 (the "License"); | |
| # you may not use this file except in compliance with the License. | |
| # You may obtain a copy of the License at | |
| # | |
| # http://www.apache.org/licenses/LICENSE-2.0 | |
| # | |
| # Unless required by applicable law or agreed to in writing, software | |
| # distributed under the License is distributed on an "AS IS" BASIS, | |
| # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. | |
| # See the License for the specific language governing permissions and | |
| # limitations under the License. | |
| """ | |
| Fine-tuning a 🤗 Transformers model for question answering using 🤗 Accelerate. | |
| """ | |
| # You can also adapt this script on your own question answering task. Pointers for this are left as comments. | |
| import argparse | |
| import json | |
| import logging | |
| import math | |
| import os | |
| import random | |
| from pathlib import Path | |
| import datasets | |
| import evaluate | |
| import numpy as np | |
| import torch | |
| from accelerate import Accelerator | |
| from accelerate.logging import get_logger | |
| from accelerate.utils import set_seed | |
| from datasets import load_dataset | |
| from huggingface_hub import HfApi | |
| from torch.utils.data import DataLoader | |
| from tqdm.auto import tqdm | |
| from utils_qa import postprocess_qa_predictions | |
| import transformers | |
| from transformers import ( | |
| CONFIG_MAPPING, | |
| MODEL_MAPPING, | |
| AutoConfig, | |
| AutoModelForQuestionAnswering, | |
| AutoTokenizer, | |
| DataCollatorWithPadding, | |
| EvalPrediction, | |
| SchedulerType, | |
| default_data_collator, | |
| get_scheduler, | |
| ) | |
| from transformers.utils import check_min_version, send_example_telemetry | |
| from transformers.utils.versions import require_version | |
| # Will error if the minimal version of Transformers is not installed. Remove at your own risks. | |
| check_min_version("4.40.0.dev0") | |
| require_version("datasets>=1.8.0", "To fix: pip install -r examples/pytorch/question-answering/requirements.txt") | |
| logger = get_logger(__name__) | |
| # You should update this to your particular problem to have better documentation of `model_type` | |
| MODEL_CONFIG_CLASSES = list(MODEL_MAPPING.keys()) | |
| MODEL_TYPES = tuple(conf.model_type for conf in MODEL_CONFIG_CLASSES) | |
| def save_prefixed_metrics(results, output_dir, file_name: str = "all_results.json", metric_key_prefix: str = "eval"): | |
| """ | |
| Save results while prefixing metric names. | |
| Args: | |
| results: (:obj:`dict`): | |
| A dictionary of results. | |
| output_dir: (:obj:`str`): | |
| An output directory. | |
| file_name: (:obj:`str`, `optional`, defaults to :obj:`all_results.json`): | |
| An output file name. | |
| metric_key_prefix: (:obj:`str`, `optional`, defaults to :obj:`eval`): | |
| A metric name prefix. | |
| """ | |
| # Prefix all keys with metric_key_prefix + '_' | |
| for key in list(results.keys()): | |
| if not key.startswith(f"{metric_key_prefix}_"): | |
| results[f"{metric_key_prefix}_{key}"] = results.pop(key) | |
| with open(os.path.join(output_dir, file_name), "w") as f: | |
| json.dump(results, f, indent=4) | |
| def parse_args(): | |
| parser = argparse.ArgumentParser(description="Finetune a transformers model on a Question Answering task") | |
| parser.add_argument( | |
| "--dataset_name", | |
| type=str, | |
| default=None, | |
| help="The name of the dataset to use (via the datasets library).", | |
| ) | |
| parser.add_argument( | |
| "--dataset_config_name", | |
| type=str, | |
| default=None, | |
| help="The configuration name of the dataset to use (via the datasets library).", | |
| ) | |
| parser.add_argument( | |
| "--train_file", type=str, default=None, help="A csv or a json file containing the training data." | |
| ) | |
| parser.add_argument( | |
| "--preprocessing_num_workers", type=int, default=1, help="A csv or a json file containing the training data." | |
| ) | |
| parser.add_argument("--do_predict", action="store_true", help="To do prediction on the question answering model") | |
| parser.add_argument( | |
| "--validation_file", type=str, default=None, help="A csv or a json file containing the validation data." | |
| ) | |
| parser.add_argument( | |
| "--test_file", type=str, default=None, help="A csv or a json file containing the Prediction data." | |
| ) | |
| parser.add_argument( | |
| "--max_seq_length", | |
| type=int, | |
| default=384, | |
| help=( | |
| "The maximum total input sequence length after tokenization. Sequences longer than this will be truncated," | |
| " sequences shorter will be padded if `--pad_to_max_length` is passed." | |
| ), | |
| ) | |
| parser.add_argument( | |
| "--pad_to_max_length", | |
| action="store_true", | |
| help="If passed, pad all samples to `max_seq_length`. Otherwise, dynamic padding is used.", | |
| ) | |
| parser.add_argument( | |
| "--model_name_or_path", | |
| type=str, | |
| help="Path to pretrained model or model identifier from huggingface.co/models.", | |
| required=False, | |
| ) | |
| parser.add_argument( | |
| "--config_name", | |
| type=str, | |
| default=None, | |
| help="Pretrained config name or path if not the same as model_name", | |
| ) | |
| parser.add_argument( | |
| "--tokenizer_name", | |
| type=str, | |
| default=None, | |
| help="Pretrained tokenizer name or path if not the same as model_name", | |
| ) | |
| parser.add_argument( | |
| "--use_slow_tokenizer", | |
| action="store_true", | |
| help="If passed, will use a slow tokenizer (not backed by the 🤗 Tokenizers library).", | |
| ) | |
| parser.add_argument( | |
| "--per_device_train_batch_size", | |
| type=int, | |
| default=8, | |
| help="Batch size (per device) for the training dataloader.", | |
| ) | |
| parser.add_argument( | |
| "--per_device_eval_batch_size", | |
| type=int, | |
| default=8, | |
| help="Batch size (per device) for the evaluation dataloader.", | |
| ) | |
| parser.add_argument( | |
| "--learning_rate", | |
| type=float, | |
| default=5e-5, | |
| help="Initial learning rate (after the potential warmup period) to use.", | |
| ) | |
| parser.add_argument("--weight_decay", type=float, default=0.0, help="Weight decay to use.") | |
| parser.add_argument("--num_train_epochs", type=int, default=3, help="Total number of training epochs to perform.") | |
| parser.add_argument( | |
| "--max_train_steps", | |
| type=int, | |
| default=None, | |
| help="Total number of training steps to perform. If provided, overrides num_train_epochs.", | |
| ) | |
| parser.add_argument( | |
| "--gradient_accumulation_steps", | |
| type=int, | |
| default=1, | |
| help="Number of updates steps to accumulate before performing a backward/update pass.", | |
| ) | |
| parser.add_argument( | |
| "--lr_scheduler_type", | |
| type=SchedulerType, | |
| default="linear", | |
| help="The scheduler type to use.", | |
| choices=["linear", "cosine", "cosine_with_restarts", "polynomial", "constant", "constant_with_warmup"], | |
| ) | |
| parser.add_argument( | |
| "--num_warmup_steps", type=int, default=0, help="Number of steps for the warmup in the lr scheduler." | |
| ) | |
| parser.add_argument("--output_dir", type=str, default=None, help="Where to store the final model.") | |
| parser.add_argument("--seed", type=int, default=None, help="A seed for reproducible training.") | |
| parser.add_argument( | |
| "--doc_stride", | |
| type=int, | |
| default=128, | |
| help="When splitting up a long document into chunks how much stride to take between chunks.", | |
| ) | |
| parser.add_argument( | |
| "--n_best_size", | |
| type=int, | |
| default=20, | |
| help="The total number of n-best predictions to generate when looking for an answer.", | |
| ) | |
| parser.add_argument( | |
| "--null_score_diff_threshold", | |
| type=float, | |
| default=0.0, | |
| help=( | |
| "The threshold used to select the null answer: if the best answer has a score that is less than " | |
| "the score of the null answer minus this threshold, the null answer is selected for this example. " | |
| "Only useful when `version_2_with_negative=True`." | |
| ), | |
| ) | |
| parser.add_argument( | |
| "--version_2_with_negative", | |
| action="store_true", | |
| help="If true, some of the examples do not have an answer.", | |
| ) | |
| parser.add_argument( | |
| "--max_answer_length", | |
| type=int, | |
| default=30, | |
| help=( | |
| "The maximum length of an answer that can be generated. This is needed because the start " | |
| "and end predictions are not conditioned on one another." | |
| ), | |
| ) | |
| parser.add_argument( | |
| "--max_train_samples", | |
| type=int, | |
| default=None, | |
| help=( | |
| "For debugging purposes or quicker training, truncate the number of training examples to this " | |
| "value if set." | |
| ), | |
| ) | |
| parser.add_argument( | |
| "--max_eval_samples", | |
| type=int, | |
| default=None, | |
| help=( | |
| "For debugging purposes or quicker training, truncate the number of evaluation examples to this " | |
| "value if set." | |
| ), | |
| ) | |
| parser.add_argument( | |
| "--overwrite_cache", action="store_true", help="Overwrite the cached training and evaluation sets" | |
| ) | |
| parser.add_argument( | |
| "--max_predict_samples", | |
| type=int, | |
| default=None, | |
| help="For debugging purposes or quicker training, truncate the number of prediction examples to this", | |
| ) | |
| parser.add_argument( | |
| "--model_type", | |
| type=str, | |
| default=None, | |
| help="Model type to use if training from scratch.", | |
| choices=MODEL_TYPES, | |
| ) | |
| parser.add_argument("--push_to_hub", action="store_true", help="Whether or not to push the model to the Hub.") | |
| parser.add_argument( | |
| "--hub_model_id", type=str, help="The name of the repository to keep in sync with the local `output_dir`." | |
| ) | |
| parser.add_argument("--hub_token", type=str, help="The token to use to push to the Model Hub.") | |
| parser.add_argument( | |
| "--trust_remote_code", | |
| type=bool, | |
| default=False, | |
| help=( | |
| "Whether or not to allow for custom models defined on the Hub in their own modeling files. This option " | |
| "should only be set to `True` for repositories you trust and in which you have read the code, as it will " | |
| "execute code present on the Hub on your local machine." | |
| ), | |
| ) | |
| parser.add_argument( | |
| "--checkpointing_steps", | |
| type=str, | |
| default=None, | |
| help="Whether the various states should be saved at the end of every n steps, or 'epoch' for each epoch.", | |
| ) | |
| parser.add_argument( | |
| "--resume_from_checkpoint", | |
| type=str, | |
| default=None, | |
| help="If the training should continue from a checkpoint folder.", | |
| ) | |
| parser.add_argument( | |
| "--with_tracking", | |
| action="store_true", | |
| help="Whether to enable experiment trackers for logging.", | |
| ) | |
| parser.add_argument( | |
| "--report_to", | |
| type=str, | |
| default="all", | |
| help=( | |
| 'The integration to report the results and logs to. Supported platforms are `"tensorboard"`,' | |
| ' `"wandb"`, `"comet_ml"` and `"clearml"`. Use `"all"` (default) to report to all integrations. ' | |
| "Only applicable when `--with_tracking` is passed." | |
| ), | |
| ) | |
| args = parser.parse_args() | |
| # Sanity checks | |
| if ( | |
| args.dataset_name is None | |
| and args.train_file is None | |
| and args.validation_file is None | |
| and args.test_file is None | |
| ): | |
| raise ValueError("Need either a dataset name or a training/validation/test file.") | |
| else: | |
| if args.train_file is not None: | |
| extension = args.train_file.split(".")[-1] | |
| assert extension in ["csv", "json"], "`train_file` should be a csv or a json file." | |
| if args.validation_file is not None: | |
| extension = args.validation_file.split(".")[-1] | |
| assert extension in ["csv", "json"], "`validation_file` should be a csv or a json file." | |
| if args.test_file is not None: | |
| extension = args.test_file.split(".")[-1] | |
| assert extension in ["csv", "json"], "`test_file` should be a csv or a json file." | |
| if args.push_to_hub: | |
| assert args.output_dir is not None, "Need an `output_dir` to create a repo when `--push_to_hub` is passed." | |
| return args | |
| def main(): | |
| args = parse_args() | |
| # Sending telemetry. Tracking the example usage helps us better allocate resources to maintain them. The | |
| # information sent is the one passed as arguments along with your Python/PyTorch versions. | |
| send_example_telemetry("run_qa_no_trainer", args) | |
| # Initialize the accelerator. We will let the accelerator handle device placement for us in this example. | |
| # If we're using tracking, we also need to initialize it here and it will by default pick up all supported trackers | |
| # in the environment | |
| accelerator_log_kwargs = {} | |
| if args.with_tracking: | |
| accelerator_log_kwargs["log_with"] = args.report_to | |
| accelerator_log_kwargs["project_dir"] = args.output_dir | |
| accelerator = Accelerator(gradient_accumulation_steps=args.gradient_accumulation_steps, **accelerator_log_kwargs) | |
| # Make one log on every process with the configuration for debugging. | |
| logging.basicConfig( | |
| format="%(asctime)s - %(levelname)s - %(name)s - %(message)s", | |
| datefmt="%m/%d/%Y %H:%M:%S", | |
| level=logging.INFO, | |
| ) | |
| logger.info(accelerator.state, main_process_only=False) | |
| if accelerator.is_local_main_process: | |
| datasets.utils.logging.set_verbosity_warning() | |
| transformers.utils.logging.set_verbosity_info() | |
| else: | |
| datasets.utils.logging.set_verbosity_error() | |
| transformers.utils.logging.set_verbosity_error() | |
| # If passed along, set the training seed now. | |
| if args.seed is not None: | |
| set_seed(args.seed) | |
| # Handle the repository creation | |
| if accelerator.is_main_process: | |
| if args.push_to_hub: | |
| # Retrieve of infer repo_name | |
| repo_name = args.hub_model_id | |
| if repo_name is None: | |
| repo_name = Path(args.output_dir).absolute().name | |
| # Create repo and retrieve repo_id | |
| api = HfApi() | |
| repo_id = api.create_repo(repo_name, exist_ok=True, token=args.hub_token).repo_id | |
| with open(os.path.join(args.output_dir, ".gitignore"), "w+") as gitignore: | |
| if "step_*" not in gitignore: | |
| gitignore.write("step_*\n") | |
| if "epoch_*" not in gitignore: | |
| gitignore.write("epoch_*\n") | |
| elif args.output_dir is not None: | |
| os.makedirs(args.output_dir, exist_ok=True) | |
| accelerator.wait_for_everyone() | |
| # Get the datasets: you can either provide your own CSV/JSON/TXT training and evaluation files (see below) | |
| # or just provide the name of one of the public datasets available on the hub at https://huggingface.co/datasets/ | |
| # (the dataset will be downloaded automatically from the datasets Hub). | |
| # | |
| # For CSV/JSON files, this script will use the column called 'text' or the first column if no column called | |
| # 'text' is found. You can easily tweak this behavior (see below). | |
| # | |
| # In distributed training, the load_dataset function guarantee that only one local process can concurrently | |
| # download the dataset. | |
| if args.dataset_name is not None: | |
| # Downloading and loading a dataset from the hub. | |
| raw_datasets = load_dataset(args.dataset_name, args.dataset_config_name) | |
| else: | |
| data_files = {} | |
| if args.train_file is not None: | |
| data_files["train"] = args.train_file | |
| extension = args.train_file.split(".")[-1] | |
| if args.validation_file is not None: | |
| data_files["validation"] = args.validation_file | |
| extension = args.validation_file.split(".")[-1] | |
| if args.test_file is not None: | |
| data_files["test"] = args.test_file | |
| extension = args.test_file.split(".")[-1] | |
| raw_datasets = load_dataset(extension, data_files=data_files, field="data") | |
| # See more about loading any type of standard or custom dataset (from files, python dict, pandas DataFrame, etc) at | |
| # https://huggingface.co/docs/datasets/loading_datasets. | |
| # Load pretrained model and tokenizer | |
| # | |
| # In distributed training, the .from_pretrained methods guarantee that only one local process can concurrently | |
| # download model & vocab. | |
| if args.config_name: | |
| config = AutoConfig.from_pretrained(args.config_name, trust_remote_code=args.trust_remote_code) | |
| elif args.model_name_or_path: | |
| config = AutoConfig.from_pretrained(args.model_name_or_path, trust_remote_code=args.trust_remote_code) | |
| else: | |
| config = CONFIG_MAPPING[args.model_type]() | |
| logger.warning("You are instantiating a new config instance from scratch.") | |
| if args.tokenizer_name: | |
| tokenizer = AutoTokenizer.from_pretrained( | |
| args.tokenizer_name, use_fast=True, trust_remote_code=args.trust_remote_code | |
| ) | |
| elif args.model_name_or_path: | |
| tokenizer = AutoTokenizer.from_pretrained( | |
| args.model_name_or_path, use_fast=True, trust_remote_code=args.trust_remote_code | |
| ) | |
| else: | |
| raise ValueError( | |
| "You are instantiating a new tokenizer from scratch. This is not supported by this script. " | |
| "You can do it from another script, save it, and load it from here, using --tokenizer_name." | |
| ) | |
| if args.model_name_or_path: | |
| model = AutoModelForQuestionAnswering.from_pretrained( | |
| args.model_name_or_path, | |
| from_tf=bool(".ckpt" in args.model_name_or_path), | |
| config=config, | |
| trust_remote_code=args.trust_remote_code, | |
| ) | |
| else: | |
| logger.info("Training new model from scratch") | |
| model = AutoModelForQuestionAnswering.from_config(config, trust_remote_code=args.trust_remote_code) | |
| # Preprocessing the datasets. | |
| # Preprocessing is slightly different for training and evaluation. | |
| column_names = raw_datasets["train"].column_names | |
| question_column_name = "question" if "question" in column_names else column_names[0] | |
| context_column_name = "context" if "context" in column_names else column_names[1] | |
| answer_column_name = "answers" if "answers" in column_names else column_names[2] | |
| # Padding side determines if we do (question|context) or (context|question). | |
| pad_on_right = tokenizer.padding_side == "right" | |
| if args.max_seq_length > tokenizer.model_max_length: | |
| logger.warning( | |
| f"The max_seq_length passed ({args.max_seq_length}) is larger than the maximum length for the " | |
| f"model ({tokenizer.model_max_length}). Using max_seq_length={tokenizer.model_max_length}." | |
| ) | |
| max_seq_length = min(args.max_seq_length, tokenizer.model_max_length) | |
| # Training preprocessing | |
| def prepare_train_features(examples): | |
| # Some of the questions have lots of whitespace on the left, which is not useful and will make the | |
| # truncation of the context fail (the tokenized question will take a lots of space). So we remove that | |
| # left whitespace | |
| examples[question_column_name] = [q.lstrip() for q in examples[question_column_name]] | |
| # Tokenize our examples with truncation and maybe padding, but keep the overflows using a stride. This results | |
| # in one example possible giving several features when a context is long, each of those features having a | |
| # context that overlaps a bit the context of the previous feature. | |
| tokenized_examples = tokenizer( | |
| examples[question_column_name if pad_on_right else context_column_name], | |
| examples[context_column_name if pad_on_right else question_column_name], | |
| truncation="only_second" if pad_on_right else "only_first", | |
| max_length=max_seq_length, | |
| stride=args.doc_stride, | |
| return_overflowing_tokens=True, | |
| return_offsets_mapping=True, | |
| padding="max_length" if args.pad_to_max_length else False, | |
| ) | |
| # Since one example might give us several features if it has a long context, we need a map from a feature to | |
| # its corresponding example. This key gives us just that. | |
| sample_mapping = tokenized_examples.pop("overflow_to_sample_mapping") | |
| # The offset mappings will give us a map from token to character position in the original context. This will | |
| # help us compute the start_positions and end_positions. | |
| offset_mapping = tokenized_examples.pop("offset_mapping") | |
| # Let's label those examples! | |
| tokenized_examples["start_positions"] = [] | |
| tokenized_examples["end_positions"] = [] | |
| for i, offsets in enumerate(offset_mapping): | |
| # We will label impossible answers with the index of the CLS token. | |
| input_ids = tokenized_examples["input_ids"][i] | |
| cls_index = input_ids.index(tokenizer.cls_token_id) | |
| # Grab the sequence corresponding to that example (to know what is the context and what is the question). | |
| sequence_ids = tokenized_examples.sequence_ids(i) | |
| # One example can give several spans, this is the index of the example containing this span of text. | |
| sample_index = sample_mapping[i] | |
| answers = examples[answer_column_name][sample_index] | |
| # If no answers are given, set the cls_index as answer. | |
| if len(answers["answer_start"]) == 0: | |
| tokenized_examples["start_positions"].append(cls_index) | |
| tokenized_examples["end_positions"].append(cls_index) | |
| else: | |
| # Start/end character index of the answer in the text. | |
| start_char = answers["answer_start"][0] | |
| end_char = start_char + len(answers["text"][0]) | |
| # Start token index of the current span in the text. | |
| token_start_index = 0 | |
| while sequence_ids[token_start_index] != (1 if pad_on_right else 0): | |
| token_start_index += 1 | |
| # End token index of the current span in the text. | |
| token_end_index = len(input_ids) - 1 | |
| while sequence_ids[token_end_index] != (1 if pad_on_right else 0): | |
| token_end_index -= 1 | |
| # Detect if the answer is out of the span (in which case this feature is labeled with the CLS index). | |
| if not (offsets[token_start_index][0] <= start_char and offsets[token_end_index][1] >= end_char): | |
| tokenized_examples["start_positions"].append(cls_index) | |
| tokenized_examples["end_positions"].append(cls_index) | |
| else: | |
| # Otherwise move the token_start_index and token_end_index to the two ends of the answer. | |
| # Note: we could go after the last offset if the answer is the last word (edge case). | |
| while token_start_index < len(offsets) and offsets[token_start_index][0] <= start_char: | |
| token_start_index += 1 | |
| tokenized_examples["start_positions"].append(token_start_index - 1) | |
| while offsets[token_end_index][1] >= end_char: | |
| token_end_index -= 1 | |
| tokenized_examples["end_positions"].append(token_end_index + 1) | |
| return tokenized_examples | |
| if "train" not in raw_datasets: | |
| raise ValueError("--do_train requires a train dataset") | |
| train_dataset = raw_datasets["train"] | |
| if args.max_train_samples is not None: | |
| # We will select sample from whole data if argument is specified | |
| train_dataset = train_dataset.select(range(args.max_train_samples)) | |
| # Create train feature from dataset | |
| with accelerator.main_process_first(): | |
| train_dataset = train_dataset.map( | |
| prepare_train_features, | |
| batched=True, | |
| num_proc=args.preprocessing_num_workers, | |
| remove_columns=column_names, | |
| load_from_cache_file=not args.overwrite_cache, | |
| desc="Running tokenizer on train dataset", | |
| ) | |
| if args.max_train_samples is not None: | |
| # Number of samples might increase during Feature Creation, We select only specified max samples | |
| train_dataset = train_dataset.select(range(args.max_train_samples)) | |
| # Validation preprocessing | |
| def prepare_validation_features(examples): | |
| # Some of the questions have lots of whitespace on the left, which is not useful and will make the | |
| # truncation of the context fail (the tokenized question will take a lots of space). So we remove that | |
| # left whitespace | |
| examples[question_column_name] = [q.lstrip() for q in examples[question_column_name]] | |
| # Tokenize our examples with truncation and maybe padding, but keep the overflows using a stride. This results | |
| # in one example possible giving several features when a context is long, each of those features having a | |
| # context that overlaps a bit the context of the previous feature. | |
| tokenized_examples = tokenizer( | |
| examples[question_column_name if pad_on_right else context_column_name], | |
| examples[context_column_name if pad_on_right else question_column_name], | |
| truncation="only_second" if pad_on_right else "only_first", | |
| max_length=max_seq_length, | |
| stride=args.doc_stride, | |
| return_overflowing_tokens=True, | |
| return_offsets_mapping=True, | |
| padding="max_length" if args.pad_to_max_length else False, | |
| ) | |
| # Since one example might give us several features if it has a long context, we need a map from a feature to | |
| # its corresponding example. This key gives us just that. | |
| sample_mapping = tokenized_examples.pop("overflow_to_sample_mapping") | |
| # For evaluation, we will need to convert our predictions to substrings of the context, so we keep the | |
| # corresponding example_id and we will store the offset mappings. | |
| tokenized_examples["example_id"] = [] | |
| for i in range(len(tokenized_examples["input_ids"])): | |
| # Grab the sequence corresponding to that example (to know what is the context and what is the question). | |
| sequence_ids = tokenized_examples.sequence_ids(i) | |
| context_index = 1 if pad_on_right else 0 | |
| # One example can give several spans, this is the index of the example containing this span of text. | |
| sample_index = sample_mapping[i] | |
| tokenized_examples["example_id"].append(examples["id"][sample_index]) | |
| # Set to None the offset_mapping that are not part of the context so it's easy to determine if a token | |
| # position is part of the context or not. | |
| tokenized_examples["offset_mapping"][i] = [ | |
| (o if sequence_ids[k] == context_index else None) | |
| for k, o in enumerate(tokenized_examples["offset_mapping"][i]) | |
| ] | |
| return tokenized_examples | |
| if "validation" not in raw_datasets: | |
| raise ValueError("--do_eval requires a validation dataset") | |
| eval_examples = raw_datasets["validation"] | |
| if args.max_eval_samples is not None: | |
| # We will select sample from whole data | |
| eval_examples = eval_examples.select(range(args.max_eval_samples)) | |
| # Validation Feature Creation | |
| with accelerator.main_process_first(): | |
| eval_dataset = eval_examples.map( | |
| prepare_validation_features, | |
| batched=True, | |
| num_proc=args.preprocessing_num_workers, | |
| remove_columns=column_names, | |
| load_from_cache_file=not args.overwrite_cache, | |
| desc="Running tokenizer on validation dataset", | |
| ) | |
| if args.max_eval_samples is not None: | |
| # During Feature creation dataset samples might increase, we will select required samples again | |
| eval_dataset = eval_dataset.select(range(args.max_eval_samples)) | |
| if args.do_predict: | |
| if "test" not in raw_datasets: | |
| raise ValueError("--do_predict requires a test dataset") | |
| predict_examples = raw_datasets["test"] | |
| if args.max_predict_samples is not None: | |
| # We will select sample from whole data | |
| predict_examples = predict_examples.select(range(args.max_predict_samples)) | |
| # Predict Feature Creation | |
| with accelerator.main_process_first(): | |
| predict_dataset = predict_examples.map( | |
| prepare_validation_features, | |
| batched=True, | |
| num_proc=args.preprocessing_num_workers, | |
| remove_columns=column_names, | |
| load_from_cache_file=not args.overwrite_cache, | |
| desc="Running tokenizer on prediction dataset", | |
| ) | |
| if args.max_predict_samples is not None: | |
| # During Feature creation dataset samples might increase, we will select required samples again | |
| predict_dataset = predict_dataset.select(range(args.max_predict_samples)) | |
| # Log a few random samples from the training set: | |
| for index in random.sample(range(len(train_dataset)), 3): | |
| logger.info(f"Sample {index} of the training set: {train_dataset[index]}.") | |
| # DataLoaders creation: | |
| if args.pad_to_max_length: | |
| # If padding was already done ot max length, we use the default data collator that will just convert everything | |
| # to tensors. | |
| data_collator = default_data_collator | |
| else: | |
| # Otherwise, `DataCollatorWithPadding` will apply dynamic padding for us (by padding to the maximum length of | |
| # the samples passed). When using mixed precision, we add `pad_to_multiple_of=8` to pad all tensors to multiple | |
| # of 8s, which will enable the use of Tensor Cores on NVIDIA hardware with compute capability >= 7.5 (Volta). | |
| data_collator = DataCollatorWithPadding(tokenizer, pad_to_multiple_of=(8 if accelerator.use_fp16 else None)) | |
| train_dataloader = DataLoader( | |
| train_dataset, shuffle=True, collate_fn=data_collator, batch_size=args.per_device_train_batch_size | |
| ) | |
| eval_dataset_for_model = eval_dataset.remove_columns(["example_id", "offset_mapping"]) | |
| eval_dataloader = DataLoader( | |
| eval_dataset_for_model, collate_fn=data_collator, batch_size=args.per_device_eval_batch_size | |
| ) | |
| if args.do_predict: | |
| predict_dataset_for_model = predict_dataset.remove_columns(["example_id", "offset_mapping"]) | |
| predict_dataloader = DataLoader( | |
| predict_dataset_for_model, collate_fn=data_collator, batch_size=args.per_device_eval_batch_size | |
| ) | |
| # Post-processing: | |
| def post_processing_function(examples, features, predictions, stage="eval"): | |
| # Post-processing: we match the start logits and end logits to answers in the original context. | |
| predictions = postprocess_qa_predictions( | |
| examples=examples, | |
| features=features, | |
| predictions=predictions, | |
| version_2_with_negative=args.version_2_with_negative, | |
| n_best_size=args.n_best_size, | |
| max_answer_length=args.max_answer_length, | |
| null_score_diff_threshold=args.null_score_diff_threshold, | |
| output_dir=args.output_dir, | |
| prefix=stage, | |
| ) | |
| # Format the result to the format the metric expects. | |
| if args.version_2_with_negative: | |
| formatted_predictions = [ | |
| {"id": k, "prediction_text": v, "no_answer_probability": 0.0} for k, v in predictions.items() | |
| ] | |
| else: | |
| formatted_predictions = [{"id": k, "prediction_text": v} for k, v in predictions.items()] | |
| references = [{"id": ex["id"], "answers": ex[answer_column_name]} for ex in examples] | |
| return EvalPrediction(predictions=formatted_predictions, label_ids=references) | |
| metric = evaluate.load("squad_v2" if args.version_2_with_negative else "squad") | |
| # Create and fill numpy array of size len_of_validation_data * max_length_of_output_tensor | |
| def create_and_fill_np_array(start_or_end_logits, dataset, max_len): | |
| """ | |
| Create and fill numpy array of size len_of_validation_data * max_length_of_output_tensor | |
| Args: | |
| start_or_end_logits(:obj:`tensor`): | |
| This is the output predictions of the model. We can only enter either start or end logits. | |
| eval_dataset: Evaluation dataset | |
| max_len(:obj:`int`): | |
| The maximum length of the output tensor. ( See the model.eval() part for more details ) | |
| """ | |
| step = 0 | |
| # create a numpy array and fill it with -100. | |
| logits_concat = np.full((len(dataset), max_len), -100, dtype=np.float64) | |
| # Now since we have create an array now we will populate it with the outputs gathered using accelerator.gather_for_metrics | |
| for i, output_logit in enumerate(start_or_end_logits): # populate columns | |
| # We have to fill it such that we have to take the whole tensor and replace it on the newly created array | |
| # And after every iteration we have to change the step | |
| batch_size = output_logit.shape[0] | |
| cols = output_logit.shape[1] | |
| if step + batch_size < len(dataset): | |
| logits_concat[step : step + batch_size, :cols] = output_logit | |
| else: | |
| logits_concat[step:, :cols] = output_logit[: len(dataset) - step] | |
| step += batch_size | |
| return logits_concat | |
| # Optimizer | |
| # Split weights in two groups, one with weight decay and the other not. | |
| no_decay = ["bias", "LayerNorm.weight"] | |
| optimizer_grouped_parameters = [ | |
| { | |
| "params": [p for n, p in model.named_parameters() if not any(nd in n for nd in no_decay)], | |
| "weight_decay": args.weight_decay, | |
| }, | |
| { | |
| "params": [p for n, p in model.named_parameters() if any(nd in n for nd in no_decay)], | |
| "weight_decay": 0.0, | |
| }, | |
| ] | |
| optimizer = torch.optim.AdamW(optimizer_grouped_parameters, lr=args.learning_rate) | |
| # Scheduler and math around the number of training steps. | |
| overrode_max_train_steps = False | |
| num_update_steps_per_epoch = math.ceil(len(train_dataloader) / args.gradient_accumulation_steps) | |
| if args.max_train_steps is None: | |
| args.max_train_steps = args.num_train_epochs * num_update_steps_per_epoch | |
| overrode_max_train_steps = True | |
| lr_scheduler = get_scheduler( | |
| name=args.lr_scheduler_type, | |
| optimizer=optimizer, | |
| num_warmup_steps=args.num_warmup_steps * accelerator.num_processes, | |
| num_training_steps=args.max_train_steps | |
| if overrode_max_train_steps | |
| else args.max_train_steps * accelerator.num_processes, | |
| ) | |
| # Prepare everything with our `accelerator`. | |
| model, optimizer, train_dataloader, eval_dataloader, lr_scheduler = accelerator.prepare( | |
| model, optimizer, train_dataloader, eval_dataloader, lr_scheduler | |
| ) | |
| # We need to recalculate our total training steps as the size of the training dataloader may have changed. | |
| num_update_steps_per_epoch = math.ceil(len(train_dataloader) / args.gradient_accumulation_steps) | |
| if overrode_max_train_steps: | |
| args.max_train_steps = args.num_train_epochs * num_update_steps_per_epoch | |
| # Afterwards we recalculate our number of training epochs | |
| args.num_train_epochs = math.ceil(args.max_train_steps / num_update_steps_per_epoch) | |
| # Figure out how many steps we should save the Accelerator states | |
| checkpointing_steps = args.checkpointing_steps | |
| if checkpointing_steps is not None and checkpointing_steps.isdigit(): | |
| checkpointing_steps = int(checkpointing_steps) | |
| # We need to initialize the trackers we use, and also store our configuration. | |
| # The trackers initializes automatically on the main process. | |
| if args.with_tracking: | |
| experiment_config = vars(args) | |
| # TensorBoard cannot log Enums, need the raw value | |
| experiment_config["lr_scheduler_type"] = experiment_config["lr_scheduler_type"].value | |
| accelerator.init_trackers("qa_no_trainer", experiment_config) | |
| # Train! | |
| total_batch_size = args.per_device_train_batch_size * accelerator.num_processes * args.gradient_accumulation_steps | |
| logger.info("***** Running training *****") | |
| logger.info(f" Num examples = {len(train_dataset)}") | |
| logger.info(f" Num Epochs = {args.num_train_epochs}") | |
| logger.info(f" Instantaneous batch size per device = {args.per_device_train_batch_size}") | |
| logger.info(f" Total train batch size (w. parallel, distributed & accumulation) = {total_batch_size}") | |
| logger.info(f" Gradient Accumulation steps = {args.gradient_accumulation_steps}") | |
| logger.info(f" Total optimization steps = {args.max_train_steps}") | |
| # Only show the progress bar once on each machine. | |
| progress_bar = tqdm(range(args.max_train_steps), disable=not accelerator.is_local_main_process) | |
| completed_steps = 0 | |
| starting_epoch = 0 | |
| # Potentially load in the weights and states from a previous save | |
| if args.resume_from_checkpoint: | |
| if args.resume_from_checkpoint is not None or args.resume_from_checkpoint != "": | |
| checkpoint_path = args.resume_from_checkpoint | |
| path = os.path.basename(args.resume_from_checkpoint) | |
| else: | |
| # Get the most recent checkpoint | |
| dirs = [f.name for f in os.scandir(os.getcwd()) if f.is_dir()] | |
| dirs.sort(key=os.path.getctime) | |
| path = dirs[-1] # Sorts folders by date modified, most recent checkpoint is the last | |
| checkpoint_path = path | |
| path = os.path.basename(checkpoint_path) | |
| accelerator.print(f"Resumed from checkpoint: {checkpoint_path}") | |
| accelerator.load_state(checkpoint_path) | |
| # Extract `epoch_{i}` or `step_{i}` | |
| training_difference = os.path.splitext(path)[0] | |
| if "epoch" in training_difference: | |
| starting_epoch = int(training_difference.replace("epoch_", "")) + 1 | |
| resume_step = None | |
| completed_steps = starting_epoch * num_update_steps_per_epoch | |
| else: | |
| # need to multiply `gradient_accumulation_steps` to reflect real steps | |
| resume_step = int(training_difference.replace("step_", "")) * args.gradient_accumulation_steps | |
| starting_epoch = resume_step // len(train_dataloader) | |
| completed_steps = resume_step // args.gradient_accumulation_steps | |
| resume_step -= starting_epoch * len(train_dataloader) | |
| # update the progress_bar if load from checkpoint | |
| progress_bar.update(completed_steps) | |
| for epoch in range(starting_epoch, args.num_train_epochs): | |
| model.train() | |
| if args.with_tracking: | |
| total_loss = 0 | |
| if args.resume_from_checkpoint and epoch == starting_epoch and resume_step is not None: | |
| # We skip the first `n` batches in the dataloader when resuming from a checkpoint | |
| active_dataloader = accelerator.skip_first_batches(train_dataloader, resume_step) | |
| else: | |
| active_dataloader = train_dataloader | |
| for step, batch in enumerate(active_dataloader): | |
| with accelerator.accumulate(model): | |
| outputs = model(**batch) | |
| loss = outputs.loss | |
| # We keep track of the loss at each epoch | |
| if args.with_tracking: | |
| total_loss += loss.detach().float() | |
| accelerator.backward(loss) | |
| optimizer.step() | |
| lr_scheduler.step() | |
| optimizer.zero_grad() | |
| # Checks if the accelerator has performed an optimization step behind the scenes | |
| if accelerator.sync_gradients: | |
| progress_bar.update(1) | |
| completed_steps += 1 | |
| if isinstance(checkpointing_steps, int): | |
| if completed_steps % checkpointing_steps == 0: | |
| output_dir = f"step_{completed_steps}" | |
| if args.output_dir is not None: | |
| output_dir = os.path.join(args.output_dir, output_dir) | |
| accelerator.save_state(output_dir) | |
| if completed_steps >= args.max_train_steps: | |
| break | |
| if args.checkpointing_steps == "epoch": | |
| output_dir = f"epoch_{epoch}" | |
| if args.output_dir is not None: | |
| output_dir = os.path.join(args.output_dir, output_dir) | |
| accelerator.save_state(output_dir) | |
| if args.push_to_hub and epoch < args.num_train_epochs - 1: | |
| accelerator.wait_for_everyone() | |
| unwrapped_model = accelerator.unwrap_model(model) | |
| unwrapped_model.save_pretrained( | |
| args.output_dir, is_main_process=accelerator.is_main_process, save_function=accelerator.save | |
| ) | |
| if accelerator.is_main_process: | |
| tokenizer.save_pretrained(args.output_dir) | |
| api.upload_folder( | |
| commit_message=f"Training in progress epoch {epoch}", | |
| folder_path=args.output_dir, | |
| repo_id=repo_id, | |
| repo_type="model", | |
| token=args.hub_token, | |
| ) | |
| # Evaluation | |
| logger.info("***** Running Evaluation *****") | |
| logger.info(f" Num examples = {len(eval_dataset)}") | |
| logger.info(f" Batch size = {args.per_device_eval_batch_size}") | |
| all_start_logits = [] | |
| all_end_logits = [] | |
| model.eval() | |
| for step, batch in enumerate(eval_dataloader): | |
| with torch.no_grad(): | |
| outputs = model(**batch) | |
| start_logits = outputs.start_logits | |
| end_logits = outputs.end_logits | |
| if not args.pad_to_max_length: # necessary to pad predictions and labels for being gathered | |
| start_logits = accelerator.pad_across_processes(start_logits, dim=1, pad_index=-100) | |
| end_logits = accelerator.pad_across_processes(end_logits, dim=1, pad_index=-100) | |
| all_start_logits.append(accelerator.gather_for_metrics(start_logits).cpu().numpy()) | |
| all_end_logits.append(accelerator.gather_for_metrics(end_logits).cpu().numpy()) | |
| max_len = max([x.shape[1] for x in all_start_logits]) # Get the max_length of the tensor | |
| # concatenate the numpy array | |
| start_logits_concat = create_and_fill_np_array(all_start_logits, eval_dataset, max_len) | |
| end_logits_concat = create_and_fill_np_array(all_end_logits, eval_dataset, max_len) | |
| # delete the list of numpy arrays | |
| del all_start_logits | |
| del all_end_logits | |
| outputs_numpy = (start_logits_concat, end_logits_concat) | |
| prediction = post_processing_function(eval_examples, eval_dataset, outputs_numpy) | |
| eval_metric = metric.compute(predictions=prediction.predictions, references=prediction.label_ids) | |
| logger.info(f"Evaluation metrics: {eval_metric}") | |
| # Prediction | |
| if args.do_predict: | |
| logger.info("***** Running Prediction *****") | |
| logger.info(f" Num examples = {len(predict_dataset)}") | |
| logger.info(f" Batch size = {args.per_device_eval_batch_size}") | |
| all_start_logits = [] | |
| all_end_logits = [] | |
| model.eval() | |
| for step, batch in enumerate(predict_dataloader): | |
| with torch.no_grad(): | |
| outputs = model(**batch) | |
| start_logits = outputs.start_logits | |
| end_logits = outputs.end_logits | |
| if not args.pad_to_max_length: # necessary to pad predictions and labels for being gathered | |
| start_logits = accelerator.pad_across_processes(start_logits, dim=1, pad_index=-100) | |
| end_logits = accelerator.pad_across_processes(end_logits, dim=1, pad_index=-100) | |
| all_start_logits.append(accelerator.gather_for_metrics(start_logits).cpu().numpy()) | |
| all_end_logits.append(accelerator.gather_for_metrics(end_logits).cpu().numpy()) | |
| max_len = max([x.shape[1] for x in all_start_logits]) # Get the max_length of the tensor | |
| # concatenate the numpy array | |
| start_logits_concat = create_and_fill_np_array(all_start_logits, predict_dataset, max_len) | |
| end_logits_concat = create_and_fill_np_array(all_end_logits, predict_dataset, max_len) | |
| # delete the list of numpy arrays | |
| del all_start_logits | |
| del all_end_logits | |
| outputs_numpy = (start_logits_concat, end_logits_concat) | |
| prediction = post_processing_function(predict_examples, predict_dataset, outputs_numpy) | |
| predict_metric = metric.compute(predictions=prediction.predictions, references=prediction.label_ids) | |
| logger.info(f"Predict metrics: {predict_metric}") | |
| if args.with_tracking: | |
| log = { | |
| "squad_v2" if args.version_2_with_negative else "squad": eval_metric, | |
| "train_loss": total_loss.item() / len(train_dataloader), | |
| "epoch": epoch, | |
| "step": completed_steps, | |
| } | |
| if args.do_predict: | |
| log["squad_v2_predict" if args.version_2_with_negative else "squad_predict"] = predict_metric | |
| accelerator.log(log, step=completed_steps) | |
| if args.output_dir is not None: | |
| accelerator.wait_for_everyone() | |
| unwrapped_model = accelerator.unwrap_model(model) | |
| unwrapped_model.save_pretrained( | |
| args.output_dir, is_main_process=accelerator.is_main_process, save_function=accelerator.save | |
| ) | |
| if accelerator.is_main_process: | |
| tokenizer.save_pretrained(args.output_dir) | |
| if args.push_to_hub: | |
| api.upload_folder( | |
| commit_message="End of training", | |
| folder_path=args.output_dir, | |
| repo_id=repo_id, | |
| repo_type="model", | |
| token=args.hub_token, | |
| ) | |
| logger.info(json.dumps(eval_metric, indent=4)) | |
| save_prefixed_metrics(eval_metric, args.output_dir) | |
| if __name__ == "__main__": | |
| main() | |