Fix citation: correct title, full author list, OpenReview URL
Browse files
README.md
CHANGED
|
@@ -15,7 +15,7 @@ pipeline_tag: zero-shot-image-classification
|
|
| 15 |
|
| 16 |
SpatialWhisperer is a trimodal embedding model that aligns hematoxylin & eosin (H&E) image patches, gene-expression profiles, and free-text descriptions into a shared 2048-dimensional space. It enables zero-shot cell-type annotation of H&E patches and natural-language querying over histopathology and spatial transcriptomics data.
|
| 17 |
|
| 18 |
-
This repository hosts the main checkpoint (seed=0) from the ICML 2026 paper *
|
| 19 |
|
| 20 |
## Model architecture
|
| 21 |
|
|
@@ -94,10 +94,16 @@ To compute image–text similarities for zero-shot cell-type annotation, encode
|
|
| 94 |
|
| 95 |
```bibtex
|
| 96 |
@inproceedings{schaefer2026spatialwhisperer,
|
| 97 |
-
title
|
| 98 |
-
author
|
| 99 |
-
booktitle = {Proceedings of the 43rd International Conference on Machine Learning
|
| 100 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 101 |
}
|
| 102 |
```
|
| 103 |
|
|
|
|
| 15 |
|
| 16 |
SpatialWhisperer is a trimodal embedding model that aligns hematoxylin & eosin (H&E) image patches, gene-expression profiles, and free-text descriptions into a shared 2048-dimensional space. It enables zero-shot cell-type annotation of H&E patches and natural-language querying over histopathology and spatial transcriptomics data.
|
| 17 |
|
| 18 |
+
This repository hosts the main checkpoint (seed=0) from the ICML 2026 paper *[Transitive Representation Learning Enhances Histopathology Annotation](https://openreview.net/forum?id=Ze7U293Zw4)* (Schaefer et al., PMLR vol. 306).
|
| 19 |
|
| 20 |
## Model architecture
|
| 21 |
|
|
|
|
| 94 |
|
| 95 |
```bibtex
|
| 96 |
@inproceedings{schaefer2026spatialwhisperer,
|
| 97 |
+
title = {Transitive Representation Learning Enhances Histopathology Annotation},
|
| 98 |
+
author = {Schaefer, Moritz and Piran, Zoe and Walter, Nils Philipp and Awasthi, Animesh and Bock, Christoph and Leskovec, Jure and Good, Zinaida},
|
| 99 |
+
booktitle = {Proceedings of the 43rd International Conference on Machine Learning},
|
| 100 |
+
series = {Proceedings of Machine Learning Research},
|
| 101 |
+
volume = {306},
|
| 102 |
+
publisher = {PMLR},
|
| 103 |
+
address = {Seoul, South Korea},
|
| 104 |
+
month = jul,
|
| 105 |
+
year = {2026},
|
| 106 |
+
url = {https://openreview.net/forum?id=Ze7U293Zw4}
|
| 107 |
}
|
| 108 |
```
|
| 109 |
|