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- .gitattributes +4 -0
- biomistral_7b_dare_lora/README.md +207 -0
- biomistral_7b_dare_lora/adapter_config.json +43 -0
- biomistral_7b_dare_lora/adapter_model.safetensors +3 -0
- biomistral_7b_dare_lora/chat_template.jinja +1 -0
- biomistral_7b_dare_lora/tokenizer.json +0 -0
- biomistral_7b_dare_lora/tokenizer_config.json +17 -0
- checkpoints/full_training_biomistral/checkpoint-1000/README.md +207 -0
- checkpoints/full_training_biomistral/checkpoint-1000/adapter_config.json +43 -0
- checkpoints/full_training_biomistral/checkpoint-1000/adapter_model.safetensors +3 -0
- checkpoints/full_training_biomistral/checkpoint-1000/chat_template.jinja +1 -0
- checkpoints/full_training_biomistral/checkpoint-1000/optimizer.pt +3 -0
- checkpoints/full_training_biomistral/checkpoint-1000/rng_state.pth +3 -0
- checkpoints/full_training_biomistral/checkpoint-1000/scheduler.pt +3 -0
- checkpoints/full_training_biomistral/checkpoint-1000/tokenizer.json +0 -0
- checkpoints/full_training_biomistral/checkpoint-1000/tokenizer_config.json +17 -0
- checkpoints/full_training_biomistral/checkpoint-1000/trainer_state.json +190 -0
- checkpoints/full_training_biomistral/checkpoint-1000/training_args.bin +3 -0
- checkpoints/full_training_biomistral/checkpoint-1500/README.md +207 -0
- checkpoints/full_training_biomistral/checkpoint-1500/adapter_config.json +43 -0
- checkpoints/full_training_biomistral/checkpoint-1500/adapter_model.safetensors +3 -0
- checkpoints/full_training_biomistral/checkpoint-1500/chat_template.jinja +1 -0
- checkpoints/full_training_biomistral/checkpoint-1500/optimizer.pt +3 -0
- checkpoints/full_training_biomistral/checkpoint-1500/rng_state.pth +3 -0
- checkpoints/full_training_biomistral/checkpoint-1500/scheduler.pt +3 -0
- checkpoints/full_training_biomistral/checkpoint-1500/tokenizer.json +0 -0
- checkpoints/full_training_biomistral/checkpoint-1500/tokenizer_config.json +17 -0
- checkpoints/full_training_biomistral/checkpoint-1500/trainer_state.json +268 -0
- checkpoints/full_training_biomistral/checkpoint-1500/training_args.bin +3 -0
- checkpoints/full_training_biomistral/checkpoint-500/README.md +207 -0
- checkpoints/full_training_biomistral/checkpoint-500/adapter_config.json +43 -0
- checkpoints/full_training_biomistral/checkpoint-500/adapter_model.safetensors +3 -0
- checkpoints/full_training_biomistral/checkpoint-500/chat_template.jinja +1 -0
- checkpoints/full_training_biomistral/checkpoint-500/optimizer.pt +3 -0
- checkpoints/full_training_biomistral/checkpoint-500/rng_state.pth +3 -0
- checkpoints/full_training_biomistral/checkpoint-500/scheduler.pt +3 -0
- checkpoints/full_training_biomistral/checkpoint-500/tokenizer.json +0 -0
- checkpoints/full_training_biomistral/checkpoint-500/tokenizer_config.json +17 -0
- checkpoints/full_training_biomistral/checkpoint-500/trainer_state.json +112 -0
- checkpoints/full_training_biomistral/checkpoint-500/training_args.bin +3 -0
- checkpoints/full_training_llama3/checkpoint-1000/README.md +207 -0
- checkpoints/full_training_llama3/checkpoint-1000/adapter_config.json +43 -0
- checkpoints/full_training_llama3/checkpoint-1000/adapter_model.safetensors +3 -0
- checkpoints/full_training_llama3/checkpoint-1000/optimizer.pt +3 -0
- checkpoints/full_training_llama3/checkpoint-1000/rng_state.pth +3 -0
- checkpoints/full_training_llama3/checkpoint-1000/scheduler.pt +3 -0
- checkpoints/full_training_llama3/checkpoint-1000/tokenizer.json +3 -0
- checkpoints/full_training_llama3/checkpoint-1000/tokenizer_config.json +15 -0
- checkpoints/full_training_llama3/checkpoint-1000/trainer_state.json +190 -0
- checkpoints/full_training_llama3/checkpoint-1000/training_args.bin +3 -0
.gitattributes
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checkpoints/full_training_llama3/checkpoint-1000/tokenizer.json filter=lfs diff=lfs merge=lfs -text
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checkpoints/full_training_llama3/checkpoint-1500/tokenizer.json filter=lfs diff=lfs merge=lfs -text
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checkpoints/full_training_llama3/checkpoint-500/tokenizer.json filter=lfs diff=lfs merge=lfs -text
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openbiollm_8b_lora/tokenizer.json filter=lfs diff=lfs merge=lfs -text
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biomistral_7b_dare_lora/README.md
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| 1 |
+
---
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| 2 |
+
base_model: BioMistral/BioMistral-7B-DARE
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| 3 |
+
library_name: peft
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| 4 |
+
pipeline_tag: text-generation
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+
tags:
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+
- base_model:adapter:BioMistral/BioMistral-7B-DARE
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+
- lora
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| 8 |
+
- transformers
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| 9 |
+
---
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| 10 |
+
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| 11 |
+
# Model Card for Model ID
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| 12 |
+
|
| 13 |
+
<!-- Provide a quick summary of what the model is/does. -->
|
| 14 |
+
|
| 15 |
+
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| 16 |
+
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| 17 |
+
## Model Details
|
| 18 |
+
|
| 19 |
+
### Model Description
|
| 20 |
+
|
| 21 |
+
<!-- Provide a longer summary of what this model is. -->
|
| 22 |
+
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| 23 |
+
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| 24 |
+
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| 25 |
+
- **Developed by:** [More Information Needed]
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| 26 |
+
- **Funded by [optional]:** [More Information Needed]
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| 27 |
+
- **Shared by [optional]:** [More Information Needed]
|
| 28 |
+
- **Model type:** [More Information Needed]
|
| 29 |
+
- **Language(s) (NLP):** [More Information Needed]
|
| 30 |
+
- **License:** [More Information Needed]
|
| 31 |
+
- **Finetuned from model [optional]:** [More Information Needed]
|
| 32 |
+
|
| 33 |
+
### Model Sources [optional]
|
| 34 |
+
|
| 35 |
+
<!-- Provide the basic links for the model. -->
|
| 36 |
+
|
| 37 |
+
- **Repository:** [More Information Needed]
|
| 38 |
+
- **Paper [optional]:** [More Information Needed]
|
| 39 |
+
- **Demo [optional]:** [More Information Needed]
|
| 40 |
+
|
| 41 |
+
## Uses
|
| 42 |
+
|
| 43 |
+
<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
|
| 44 |
+
|
| 45 |
+
### Direct Use
|
| 46 |
+
|
| 47 |
+
<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
|
| 48 |
+
|
| 49 |
+
[More Information Needed]
|
| 50 |
+
|
| 51 |
+
### Downstream Use [optional]
|
| 52 |
+
|
| 53 |
+
<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
|
| 54 |
+
|
| 55 |
+
[More Information Needed]
|
| 56 |
+
|
| 57 |
+
### Out-of-Scope Use
|
| 58 |
+
|
| 59 |
+
<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
|
| 60 |
+
|
| 61 |
+
[More Information Needed]
|
| 62 |
+
|
| 63 |
+
## Bias, Risks, and Limitations
|
| 64 |
+
|
| 65 |
+
<!-- This section is meant to convey both technical and sociotechnical limitations. -->
|
| 66 |
+
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| 67 |
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[More Information Needed]
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| 68 |
+
|
| 69 |
+
### Recommendations
|
| 70 |
+
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| 71 |
+
<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
|
| 72 |
+
|
| 73 |
+
Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
|
| 74 |
+
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| 75 |
+
## How to Get Started with the Model
|
| 76 |
+
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| 77 |
+
Use the code below to get started with the model.
|
| 78 |
+
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| 79 |
+
[More Information Needed]
|
| 80 |
+
|
| 81 |
+
## Training Details
|
| 82 |
+
|
| 83 |
+
### Training Data
|
| 84 |
+
|
| 85 |
+
<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
|
| 86 |
+
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| 87 |
+
[More Information Needed]
|
| 88 |
+
|
| 89 |
+
### Training Procedure
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| 90 |
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| 91 |
+
<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
|
| 92 |
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#### Preprocessing [optional]
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| 95 |
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[More Information Needed]
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| 96 |
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| 97 |
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| 98 |
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#### Training Hyperparameters
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| 99 |
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| 100 |
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- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
|
| 101 |
+
|
| 102 |
+
#### Speeds, Sizes, Times [optional]
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| 103 |
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| 104 |
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<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
|
| 105 |
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| 106 |
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[More Information Needed]
|
| 107 |
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| 108 |
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## Evaluation
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| 109 |
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| 110 |
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<!-- This section describes the evaluation protocols and provides the results. -->
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| 111 |
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| 112 |
+
### Testing Data, Factors & Metrics
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| 113 |
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| 114 |
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#### Testing Data
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| 115 |
+
|
| 116 |
+
<!-- This should link to a Dataset Card if possible. -->
|
| 117 |
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|
| 118 |
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[More Information Needed]
|
| 119 |
+
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| 120 |
+
#### Factors
|
| 121 |
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|
| 122 |
+
<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
|
| 123 |
+
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| 124 |
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[More Information Needed]
|
| 125 |
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|
| 126 |
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#### Metrics
|
| 127 |
+
|
| 128 |
+
<!-- These are the evaluation metrics being used, ideally with a description of why. -->
|
| 129 |
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[More Information Needed]
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| 132 |
+
### Results
|
| 133 |
+
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| 134 |
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[More Information Needed]
|
| 135 |
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| 136 |
+
#### Summary
|
| 137 |
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| 138 |
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| 139 |
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## Model Examination [optional]
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| 141 |
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| 142 |
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<!-- Relevant interpretability work for the model goes here -->
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| 143 |
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| 144 |
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[More Information Needed]
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| 145 |
+
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| 146 |
+
## Environmental Impact
|
| 147 |
+
|
| 148 |
+
<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
|
| 149 |
+
|
| 150 |
+
Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
|
| 151 |
+
|
| 152 |
+
- **Hardware Type:** [More Information Needed]
|
| 153 |
+
- **Hours used:** [More Information Needed]
|
| 154 |
+
- **Cloud Provider:** [More Information Needed]
|
| 155 |
+
- **Compute Region:** [More Information Needed]
|
| 156 |
+
- **Carbon Emitted:** [More Information Needed]
|
| 157 |
+
|
| 158 |
+
## Technical Specifications [optional]
|
| 159 |
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| 160 |
+
### Model Architecture and Objective
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| 161 |
+
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| 162 |
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[More Information Needed]
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| 163 |
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| 164 |
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### Compute Infrastructure
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| 165 |
+
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| 166 |
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[More Information Needed]
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| 167 |
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| 168 |
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#### Hardware
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| 169 |
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| 170 |
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[More Information Needed]
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| 171 |
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| 172 |
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#### Software
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| 173 |
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| 174 |
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[More Information Needed]
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| 175 |
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| 176 |
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## Citation [optional]
|
| 177 |
+
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| 178 |
+
<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
|
| 179 |
+
|
| 180 |
+
**BibTeX:**
|
| 181 |
+
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| 182 |
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[More Information Needed]
|
| 183 |
+
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| 184 |
+
**APA:**
|
| 185 |
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| 186 |
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[More Information Needed]
|
| 187 |
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|
| 188 |
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## Glossary [optional]
|
| 189 |
+
|
| 190 |
+
<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
|
| 191 |
+
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| 192 |
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[More Information Needed]
|
| 193 |
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| 194 |
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## More Information [optional]
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| 195 |
+
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| 196 |
+
[More Information Needed]
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| 197 |
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| 198 |
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## Model Card Authors [optional]
|
| 199 |
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| 200 |
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[More Information Needed]
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## Model Card Contact
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| 203 |
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| 204 |
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[More Information Needed]
|
| 205 |
+
### Framework versions
|
| 206 |
+
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| 207 |
+
- PEFT 0.18.1
|
biomistral_7b_dare_lora/adapter_config.json
ADDED
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@@ -0,0 +1,43 @@
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{
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| 2 |
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"alora_invocation_tokens": null,
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| 3 |
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"alpha_pattern": {},
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| 4 |
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"arrow_config": null,
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| 5 |
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"auto_mapping": null,
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| 6 |
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"base_model_name_or_path": "BioMistral/BioMistral-7B-DARE",
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| 7 |
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"bias": "none",
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| 8 |
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"corda_config": null,
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| 9 |
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"ensure_weight_tying": false,
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| 10 |
+
"eva_config": null,
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| 11 |
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"exclude_modules": null,
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| 12 |
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"fan_in_fan_out": false,
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| 13 |
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"inference_mode": true,
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| 14 |
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"init_lora_weights": true,
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| 15 |
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"layer_replication": null,
|
| 16 |
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|
| 17 |
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|
| 18 |
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"loftq_config": {},
|
| 19 |
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"lora_alpha": 64,
|
| 20 |
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"lora_bias": false,
|
| 21 |
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"lora_dropout": 0.05,
|
| 22 |
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| 23 |
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"megatron_core": "megatron.core",
|
| 24 |
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"modules_to_save": null,
|
| 25 |
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"peft_type": "LORA",
|
| 26 |
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"peft_version": "0.18.1",
|
| 27 |
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"qalora_group_size": 16,
|
| 28 |
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"r": 32,
|
| 29 |
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"rank_pattern": {},
|
| 30 |
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"revision": null,
|
| 31 |
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"target_modules": [
|
| 32 |
+
"o_proj",
|
| 33 |
+
"v_proj",
|
| 34 |
+
"q_proj",
|
| 35 |
+
"k_proj"
|
| 36 |
+
],
|
| 37 |
+
"target_parameters": null,
|
| 38 |
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"task_type": "CAUSAL_LM",
|
| 39 |
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"trainable_token_indices": null,
|
| 40 |
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"use_dora": false,
|
| 41 |
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"use_qalora": false,
|
| 42 |
+
"use_rslora": true
|
| 43 |
+
}
|
biomistral_7b_dare_lora/adapter_model.safetensors
ADDED
|
@@ -0,0 +1,3 @@
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|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
+
oid sha256:e626522ead10840dd0205c4a8d4a16585ae5cff9399f651c8ae0d07018c134e1
|
| 3 |
+
size 109086416
|
biomistral_7b_dare_lora/chat_template.jinja
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{{ bos_token }}{% for message in messages %}{% if (message['role'] == 'user') != (loop.index0 % 2 == 0) %}{{ raise_exception('Conversation roles must alternate user/assistant/user/assistant/...') }}{% endif %}{% if message['role'] == 'user' %}{{ '[INST] ' + message['content'] + ' [/INST]' }}{% elif message['role'] == 'assistant' %}{{ message['content'] + eos_token + ' ' }}{% else %}{{ raise_exception('Only user and assistant roles are supported!') }}{% endif %}{% endfor %}
|
biomistral_7b_dare_lora/tokenizer.json
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
biomistral_7b_dare_lora/tokenizer_config.json
ADDED
|
@@ -0,0 +1,17 @@
|
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|
| 1 |
+
{
|
| 2 |
+
"backend": "tokenizers",
|
| 3 |
+
"bos_token": "<s>",
|
| 4 |
+
"clean_up_tokenization_spaces": false,
|
| 5 |
+
"eos_token": "</s>",
|
| 6 |
+
"extra_special_tokens": [],
|
| 7 |
+
"is_local": false,
|
| 8 |
+
"legacy": true,
|
| 9 |
+
"model_max_length": 1000000000000000019884624838656,
|
| 10 |
+
"pad_token": "</s>",
|
| 11 |
+
"padding_side": "right",
|
| 12 |
+
"sp_model_kwargs": {},
|
| 13 |
+
"spaces_between_special_tokens": false,
|
| 14 |
+
"tokenizer_class": "TokenizersBackend",
|
| 15 |
+
"unk_token": "<unk>",
|
| 16 |
+
"use_default_system_prompt": false
|
| 17 |
+
}
|
checkpoints/full_training_biomistral/checkpoint-1000/README.md
ADDED
|
@@ -0,0 +1,207 @@
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|
|
|
|
|
|
|
|
|
| 1 |
+
---
|
| 2 |
+
base_model: BioMistral/BioMistral-7B-DARE
|
| 3 |
+
library_name: peft
|
| 4 |
+
pipeline_tag: text-generation
|
| 5 |
+
tags:
|
| 6 |
+
- base_model:adapter:BioMistral/BioMistral-7B-DARE
|
| 7 |
+
- lora
|
| 8 |
+
- transformers
|
| 9 |
+
---
|
| 10 |
+
|
| 11 |
+
# Model Card for Model ID
|
| 12 |
+
|
| 13 |
+
<!-- Provide a quick summary of what the model is/does. -->
|
| 14 |
+
|
| 15 |
+
|
| 16 |
+
|
| 17 |
+
## Model Details
|
| 18 |
+
|
| 19 |
+
### Model Description
|
| 20 |
+
|
| 21 |
+
<!-- Provide a longer summary of what this model is. -->
|
| 22 |
+
|
| 23 |
+
|
| 24 |
+
|
| 25 |
+
- **Developed by:** [More Information Needed]
|
| 26 |
+
- **Funded by [optional]:** [More Information Needed]
|
| 27 |
+
- **Shared by [optional]:** [More Information Needed]
|
| 28 |
+
- **Model type:** [More Information Needed]
|
| 29 |
+
- **Language(s) (NLP):** [More Information Needed]
|
| 30 |
+
- **License:** [More Information Needed]
|
| 31 |
+
- **Finetuned from model [optional]:** [More Information Needed]
|
| 32 |
+
|
| 33 |
+
### Model Sources [optional]
|
| 34 |
+
|
| 35 |
+
<!-- Provide the basic links for the model. -->
|
| 36 |
+
|
| 37 |
+
- **Repository:** [More Information Needed]
|
| 38 |
+
- **Paper [optional]:** [More Information Needed]
|
| 39 |
+
- **Demo [optional]:** [More Information Needed]
|
| 40 |
+
|
| 41 |
+
## Uses
|
| 42 |
+
|
| 43 |
+
<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
|
| 44 |
+
|
| 45 |
+
### Direct Use
|
| 46 |
+
|
| 47 |
+
<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
|
| 48 |
+
|
| 49 |
+
[More Information Needed]
|
| 50 |
+
|
| 51 |
+
### Downstream Use [optional]
|
| 52 |
+
|
| 53 |
+
<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
|
| 54 |
+
|
| 55 |
+
[More Information Needed]
|
| 56 |
+
|
| 57 |
+
### Out-of-Scope Use
|
| 58 |
+
|
| 59 |
+
<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
|
| 60 |
+
|
| 61 |
+
[More Information Needed]
|
| 62 |
+
|
| 63 |
+
## Bias, Risks, and Limitations
|
| 64 |
+
|
| 65 |
+
<!-- This section is meant to convey both technical and sociotechnical limitations. -->
|
| 66 |
+
|
| 67 |
+
[More Information Needed]
|
| 68 |
+
|
| 69 |
+
### Recommendations
|
| 70 |
+
|
| 71 |
+
<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
|
| 72 |
+
|
| 73 |
+
Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
|
| 74 |
+
|
| 75 |
+
## How to Get Started with the Model
|
| 76 |
+
|
| 77 |
+
Use the code below to get started with the model.
|
| 78 |
+
|
| 79 |
+
[More Information Needed]
|
| 80 |
+
|
| 81 |
+
## Training Details
|
| 82 |
+
|
| 83 |
+
### Training Data
|
| 84 |
+
|
| 85 |
+
<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
|
| 86 |
+
|
| 87 |
+
[More Information Needed]
|
| 88 |
+
|
| 89 |
+
### Training Procedure
|
| 90 |
+
|
| 91 |
+
<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
|
| 92 |
+
|
| 93 |
+
#### Preprocessing [optional]
|
| 94 |
+
|
| 95 |
+
[More Information Needed]
|
| 96 |
+
|
| 97 |
+
|
| 98 |
+
#### Training Hyperparameters
|
| 99 |
+
|
| 100 |
+
- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
|
| 101 |
+
|
| 102 |
+
#### Speeds, Sizes, Times [optional]
|
| 103 |
+
|
| 104 |
+
<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
|
| 105 |
+
|
| 106 |
+
[More Information Needed]
|
| 107 |
+
|
| 108 |
+
## Evaluation
|
| 109 |
+
|
| 110 |
+
<!-- This section describes the evaluation protocols and provides the results. -->
|
| 111 |
+
|
| 112 |
+
### Testing Data, Factors & Metrics
|
| 113 |
+
|
| 114 |
+
#### Testing Data
|
| 115 |
+
|
| 116 |
+
<!-- This should link to a Dataset Card if possible. -->
|
| 117 |
+
|
| 118 |
+
[More Information Needed]
|
| 119 |
+
|
| 120 |
+
#### Factors
|
| 121 |
+
|
| 122 |
+
<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
|
| 123 |
+
|
| 124 |
+
[More Information Needed]
|
| 125 |
+
|
| 126 |
+
#### Metrics
|
| 127 |
+
|
| 128 |
+
<!-- These are the evaluation metrics being used, ideally with a description of why. -->
|
| 129 |
+
|
| 130 |
+
[More Information Needed]
|
| 131 |
+
|
| 132 |
+
### Results
|
| 133 |
+
|
| 134 |
+
[More Information Needed]
|
| 135 |
+
|
| 136 |
+
#### Summary
|
| 137 |
+
|
| 138 |
+
|
| 139 |
+
|
| 140 |
+
## Model Examination [optional]
|
| 141 |
+
|
| 142 |
+
<!-- Relevant interpretability work for the model goes here -->
|
| 143 |
+
|
| 144 |
+
[More Information Needed]
|
| 145 |
+
|
| 146 |
+
## Environmental Impact
|
| 147 |
+
|
| 148 |
+
<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
|
| 149 |
+
|
| 150 |
+
Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
|
| 151 |
+
|
| 152 |
+
- **Hardware Type:** [More Information Needed]
|
| 153 |
+
- **Hours used:** [More Information Needed]
|
| 154 |
+
- **Cloud Provider:** [More Information Needed]
|
| 155 |
+
- **Compute Region:** [More Information Needed]
|
| 156 |
+
- **Carbon Emitted:** [More Information Needed]
|
| 157 |
+
|
| 158 |
+
## Technical Specifications [optional]
|
| 159 |
+
|
| 160 |
+
### Model Architecture and Objective
|
| 161 |
+
|
| 162 |
+
[More Information Needed]
|
| 163 |
+
|
| 164 |
+
### Compute Infrastructure
|
| 165 |
+
|
| 166 |
+
[More Information Needed]
|
| 167 |
+
|
| 168 |
+
#### Hardware
|
| 169 |
+
|
| 170 |
+
[More Information Needed]
|
| 171 |
+
|
| 172 |
+
#### Software
|
| 173 |
+
|
| 174 |
+
[More Information Needed]
|
| 175 |
+
|
| 176 |
+
## Citation [optional]
|
| 177 |
+
|
| 178 |
+
<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
|
| 179 |
+
|
| 180 |
+
**BibTeX:**
|
| 181 |
+
|
| 182 |
+
[More Information Needed]
|
| 183 |
+
|
| 184 |
+
**APA:**
|
| 185 |
+
|
| 186 |
+
[More Information Needed]
|
| 187 |
+
|
| 188 |
+
## Glossary [optional]
|
| 189 |
+
|
| 190 |
+
<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
|
| 191 |
+
|
| 192 |
+
[More Information Needed]
|
| 193 |
+
|
| 194 |
+
## More Information [optional]
|
| 195 |
+
|
| 196 |
+
[More Information Needed]
|
| 197 |
+
|
| 198 |
+
## Model Card Authors [optional]
|
| 199 |
+
|
| 200 |
+
[More Information Needed]
|
| 201 |
+
|
| 202 |
+
## Model Card Contact
|
| 203 |
+
|
| 204 |
+
[More Information Needed]
|
| 205 |
+
### Framework versions
|
| 206 |
+
|
| 207 |
+
- PEFT 0.18.1
|
checkpoints/full_training_biomistral/checkpoint-1000/adapter_config.json
ADDED
|
@@ -0,0 +1,43 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
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|
|
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|
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|
|
|
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|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"alora_invocation_tokens": null,
|
| 3 |
+
"alpha_pattern": {},
|
| 4 |
+
"arrow_config": null,
|
| 5 |
+
"auto_mapping": null,
|
| 6 |
+
"base_model_name_or_path": "BioMistral/BioMistral-7B-DARE",
|
| 7 |
+
"bias": "none",
|
| 8 |
+
"corda_config": null,
|
| 9 |
+
"ensure_weight_tying": false,
|
| 10 |
+
"eva_config": null,
|
| 11 |
+
"exclude_modules": null,
|
| 12 |
+
"fan_in_fan_out": false,
|
| 13 |
+
"inference_mode": true,
|
| 14 |
+
"init_lora_weights": true,
|
| 15 |
+
"layer_replication": null,
|
| 16 |
+
"layers_pattern": null,
|
| 17 |
+
"layers_to_transform": null,
|
| 18 |
+
"loftq_config": {},
|
| 19 |
+
"lora_alpha": 64,
|
| 20 |
+
"lora_bias": false,
|
| 21 |
+
"lora_dropout": 0.05,
|
| 22 |
+
"megatron_config": null,
|
| 23 |
+
"megatron_core": "megatron.core",
|
| 24 |
+
"modules_to_save": null,
|
| 25 |
+
"peft_type": "LORA",
|
| 26 |
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|
| 1 |
+
---
|
| 2 |
+
base_model: BioMistral/BioMistral-7B-DARE
|
| 3 |
+
library_name: peft
|
| 4 |
+
pipeline_tag: text-generation
|
| 5 |
+
tags:
|
| 6 |
+
- base_model:adapter:BioMistral/BioMistral-7B-DARE
|
| 7 |
+
- lora
|
| 8 |
+
- transformers
|
| 9 |
+
---
|
| 10 |
+
|
| 11 |
+
# Model Card for Model ID
|
| 12 |
+
|
| 13 |
+
<!-- Provide a quick summary of what the model is/does. -->
|
| 14 |
+
|
| 15 |
+
|
| 16 |
+
|
| 17 |
+
## Model Details
|
| 18 |
+
|
| 19 |
+
### Model Description
|
| 20 |
+
|
| 21 |
+
<!-- Provide a longer summary of what this model is. -->
|
| 22 |
+
|
| 23 |
+
|
| 24 |
+
|
| 25 |
+
- **Developed by:** [More Information Needed]
|
| 26 |
+
- **Funded by [optional]:** [More Information Needed]
|
| 27 |
+
- **Shared by [optional]:** [More Information Needed]
|
| 28 |
+
- **Model type:** [More Information Needed]
|
| 29 |
+
- **Language(s) (NLP):** [More Information Needed]
|
| 30 |
+
- **License:** [More Information Needed]
|
| 31 |
+
- **Finetuned from model [optional]:** [More Information Needed]
|
| 32 |
+
|
| 33 |
+
### Model Sources [optional]
|
| 34 |
+
|
| 35 |
+
<!-- Provide the basic links for the model. -->
|
| 36 |
+
|
| 37 |
+
- **Repository:** [More Information Needed]
|
| 38 |
+
- **Paper [optional]:** [More Information Needed]
|
| 39 |
+
- **Demo [optional]:** [More Information Needed]
|
| 40 |
+
|
| 41 |
+
## Uses
|
| 42 |
+
|
| 43 |
+
<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
|
| 44 |
+
|
| 45 |
+
### Direct Use
|
| 46 |
+
|
| 47 |
+
<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
|
| 48 |
+
|
| 49 |
+
[More Information Needed]
|
| 50 |
+
|
| 51 |
+
### Downstream Use [optional]
|
| 52 |
+
|
| 53 |
+
<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
|
| 54 |
+
|
| 55 |
+
[More Information Needed]
|
| 56 |
+
|
| 57 |
+
### Out-of-Scope Use
|
| 58 |
+
|
| 59 |
+
<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
|
| 60 |
+
|
| 61 |
+
[More Information Needed]
|
| 62 |
+
|
| 63 |
+
## Bias, Risks, and Limitations
|
| 64 |
+
|
| 65 |
+
<!-- This section is meant to convey both technical and sociotechnical limitations. -->
|
| 66 |
+
|
| 67 |
+
[More Information Needed]
|
| 68 |
+
|
| 69 |
+
### Recommendations
|
| 70 |
+
|
| 71 |
+
<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
|
| 72 |
+
|
| 73 |
+
Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
|
| 74 |
+
|
| 75 |
+
## How to Get Started with the Model
|
| 76 |
+
|
| 77 |
+
Use the code below to get started with the model.
|
| 78 |
+
|
| 79 |
+
[More Information Needed]
|
| 80 |
+
|
| 81 |
+
## Training Details
|
| 82 |
+
|
| 83 |
+
### Training Data
|
| 84 |
+
|
| 85 |
+
<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
|
| 86 |
+
|
| 87 |
+
[More Information Needed]
|
| 88 |
+
|
| 89 |
+
### Training Procedure
|
| 90 |
+
|
| 91 |
+
<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
|
| 92 |
+
|
| 93 |
+
#### Preprocessing [optional]
|
| 94 |
+
|
| 95 |
+
[More Information Needed]
|
| 96 |
+
|
| 97 |
+
|
| 98 |
+
#### Training Hyperparameters
|
| 99 |
+
|
| 100 |
+
- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
|
| 101 |
+
|
| 102 |
+
#### Speeds, Sizes, Times [optional]
|
| 103 |
+
|
| 104 |
+
<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
|
| 105 |
+
|
| 106 |
+
[More Information Needed]
|
| 107 |
+
|
| 108 |
+
## Evaluation
|
| 109 |
+
|
| 110 |
+
<!-- This section describes the evaluation protocols and provides the results. -->
|
| 111 |
+
|
| 112 |
+
### Testing Data, Factors & Metrics
|
| 113 |
+
|
| 114 |
+
#### Testing Data
|
| 115 |
+
|
| 116 |
+
<!-- This should link to a Dataset Card if possible. -->
|
| 117 |
+
|
| 118 |
+
[More Information Needed]
|
| 119 |
+
|
| 120 |
+
#### Factors
|
| 121 |
+
|
| 122 |
+
<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
|
| 123 |
+
|
| 124 |
+
[More Information Needed]
|
| 125 |
+
|
| 126 |
+
#### Metrics
|
| 127 |
+
|
| 128 |
+
<!-- These are the evaluation metrics being used, ideally with a description of why. -->
|
| 129 |
+
|
| 130 |
+
[More Information Needed]
|
| 131 |
+
|
| 132 |
+
### Results
|
| 133 |
+
|
| 134 |
+
[More Information Needed]
|
| 135 |
+
|
| 136 |
+
#### Summary
|
| 137 |
+
|
| 138 |
+
|
| 139 |
+
|
| 140 |
+
## Model Examination [optional]
|
| 141 |
+
|
| 142 |
+
<!-- Relevant interpretability work for the model goes here -->
|
| 143 |
+
|
| 144 |
+
[More Information Needed]
|
| 145 |
+
|
| 146 |
+
## Environmental Impact
|
| 147 |
+
|
| 148 |
+
<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
|
| 149 |
+
|
| 150 |
+
Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
|
| 151 |
+
|
| 152 |
+
- **Hardware Type:** [More Information Needed]
|
| 153 |
+
- **Hours used:** [More Information Needed]
|
| 154 |
+
- **Cloud Provider:** [More Information Needed]
|
| 155 |
+
- **Compute Region:** [More Information Needed]
|
| 156 |
+
- **Carbon Emitted:** [More Information Needed]
|
| 157 |
+
|
| 158 |
+
## Technical Specifications [optional]
|
| 159 |
+
|
| 160 |
+
### Model Architecture and Objective
|
| 161 |
+
|
| 162 |
+
[More Information Needed]
|
| 163 |
+
|
| 164 |
+
### Compute Infrastructure
|
| 165 |
+
|
| 166 |
+
[More Information Needed]
|
| 167 |
+
|
| 168 |
+
#### Hardware
|
| 169 |
+
|
| 170 |
+
[More Information Needed]
|
| 171 |
+
|
| 172 |
+
#### Software
|
| 173 |
+
|
| 174 |
+
[More Information Needed]
|
| 175 |
+
|
| 176 |
+
## Citation [optional]
|
| 177 |
+
|
| 178 |
+
<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
|
| 179 |
+
|
| 180 |
+
**BibTeX:**
|
| 181 |
+
|
| 182 |
+
[More Information Needed]
|
| 183 |
+
|
| 184 |
+
**APA:**
|
| 185 |
+
|
| 186 |
+
[More Information Needed]
|
| 187 |
+
|
| 188 |
+
## Glossary [optional]
|
| 189 |
+
|
| 190 |
+
<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
|
| 191 |
+
|
| 192 |
+
[More Information Needed]
|
| 193 |
+
|
| 194 |
+
## More Information [optional]
|
| 195 |
+
|
| 196 |
+
[More Information Needed]
|
| 197 |
+
|
| 198 |
+
## Model Card Authors [optional]
|
| 199 |
+
|
| 200 |
+
[More Information Needed]
|
| 201 |
+
|
| 202 |
+
## Model Card Contact
|
| 203 |
+
|
| 204 |
+
[More Information Needed]
|
| 205 |
+
### Framework versions
|
| 206 |
+
|
| 207 |
+
- PEFT 0.18.1
|
checkpoints/full_training_biomistral/checkpoint-1500/adapter_config.json
ADDED
|
@@ -0,0 +1,43 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"alora_invocation_tokens": null,
|
| 3 |
+
"alpha_pattern": {},
|
| 4 |
+
"arrow_config": null,
|
| 5 |
+
"auto_mapping": null,
|
| 6 |
+
"base_model_name_or_path": "BioMistral/BioMistral-7B-DARE",
|
| 7 |
+
"bias": "none",
|
| 8 |
+
"corda_config": null,
|
| 9 |
+
"ensure_weight_tying": false,
|
| 10 |
+
"eva_config": null,
|
| 11 |
+
"exclude_modules": null,
|
| 12 |
+
"fan_in_fan_out": false,
|
| 13 |
+
"inference_mode": true,
|
| 14 |
+
"init_lora_weights": true,
|
| 15 |
+
"layer_replication": null,
|
| 16 |
+
"layers_pattern": null,
|
| 17 |
+
"layers_to_transform": null,
|
| 18 |
+
"loftq_config": {},
|
| 19 |
+
"lora_alpha": 64,
|
| 20 |
+
"lora_bias": false,
|
| 21 |
+
"lora_dropout": 0.05,
|
| 22 |
+
"megatron_config": null,
|
| 23 |
+
"megatron_core": "megatron.core",
|
| 24 |
+
"modules_to_save": null,
|
| 25 |
+
"peft_type": "LORA",
|
| 26 |
+
"peft_version": "0.18.1",
|
| 27 |
+
"qalora_group_size": 16,
|
| 28 |
+
"r": 32,
|
| 29 |
+
"rank_pattern": {},
|
| 30 |
+
"revision": null,
|
| 31 |
+
"target_modules": [
|
| 32 |
+
"o_proj",
|
| 33 |
+
"v_proj",
|
| 34 |
+
"q_proj",
|
| 35 |
+
"k_proj"
|
| 36 |
+
],
|
| 37 |
+
"target_parameters": null,
|
| 38 |
+
"task_type": "CAUSAL_LM",
|
| 39 |
+
"trainable_token_indices": null,
|
| 40 |
+
"use_dora": false,
|
| 41 |
+
"use_qalora": false,
|
| 42 |
+
"use_rslora": true
|
| 43 |
+
}
|
checkpoints/full_training_biomistral/checkpoint-1500/adapter_model.safetensors
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:ed249e88d1c3fe3efb020c486d1b026f370a8d1d981212ae38d0a166d6566b25
|
| 3 |
+
size 109086416
|
checkpoints/full_training_biomistral/checkpoint-1500/chat_template.jinja
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{{ bos_token }}{% for message in messages %}{% if (message['role'] == 'user') != (loop.index0 % 2 == 0) %}{{ raise_exception('Conversation roles must alternate user/assistant/user/assistant/...') }}{% endif %}{% if message['role'] == 'user' %}{{ '[INST] ' + message['content'] + ' [/INST]' }}{% elif message['role'] == 'assistant' %}{{ message['content'] + eos_token + ' ' }}{% else %}{{ raise_exception('Only user and assistant roles are supported!') }}{% endif %}{% endfor %}
|
checkpoints/full_training_biomistral/checkpoint-1500/optimizer.pt
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:c26bf6a027ac71c17a603052d8942ff26cd124e7e4c7de55bedd1f2d3fc31daf
|
| 3 |
+
size 218319354
|
checkpoints/full_training_biomistral/checkpoint-1500/rng_state.pth
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:6fe1978919374efd0997761c05a94ff338f4b8cf5e6d9ae89736c3885b082711
|
| 3 |
+
size 14244
|
checkpoints/full_training_biomistral/checkpoint-1500/scheduler.pt
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:fe4e625cf5525cf235a8c7e4c6984ba05d1b5436f9e969799dcec0119a3a6c2a
|
| 3 |
+
size 1064
|
checkpoints/full_training_biomistral/checkpoint-1500/tokenizer.json
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
checkpoints/full_training_biomistral/checkpoint-1500/tokenizer_config.json
ADDED
|
@@ -0,0 +1,17 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"backend": "tokenizers",
|
| 3 |
+
"bos_token": "<s>",
|
| 4 |
+
"clean_up_tokenization_spaces": false,
|
| 5 |
+
"eos_token": "</s>",
|
| 6 |
+
"extra_special_tokens": [],
|
| 7 |
+
"is_local": false,
|
| 8 |
+
"legacy": true,
|
| 9 |
+
"model_max_length": 1000000000000000019884624838656,
|
| 10 |
+
"pad_token": "</s>",
|
| 11 |
+
"padding_side": "right",
|
| 12 |
+
"sp_model_kwargs": {},
|
| 13 |
+
"spaces_between_special_tokens": false,
|
| 14 |
+
"tokenizer_class": "TokenizersBackend",
|
| 15 |
+
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+
"trial_params": null
|
| 268 |
+
}
|
checkpoints/full_training_biomistral/checkpoint-1500/training_args.bin
ADDED
|
@@ -0,0 +1,3 @@
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| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
+
oid sha256:0d6639d9fd4a2b337584447a5bbe411991aadcadc50dc40e7273e44bf4f7c0db
|
| 3 |
+
size 4856
|
checkpoints/full_training_biomistral/checkpoint-500/README.md
ADDED
|
@@ -0,0 +1,207 @@
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|
| 1 |
+
---
|
| 2 |
+
base_model: BioMistral/BioMistral-7B-DARE
|
| 3 |
+
library_name: peft
|
| 4 |
+
pipeline_tag: text-generation
|
| 5 |
+
tags:
|
| 6 |
+
- base_model:adapter:BioMistral/BioMistral-7B-DARE
|
| 7 |
+
- lora
|
| 8 |
+
- transformers
|
| 9 |
+
---
|
| 10 |
+
|
| 11 |
+
# Model Card for Model ID
|
| 12 |
+
|
| 13 |
+
<!-- Provide a quick summary of what the model is/does. -->
|
| 14 |
+
|
| 15 |
+
|
| 16 |
+
|
| 17 |
+
## Model Details
|
| 18 |
+
|
| 19 |
+
### Model Description
|
| 20 |
+
|
| 21 |
+
<!-- Provide a longer summary of what this model is. -->
|
| 22 |
+
|
| 23 |
+
|
| 24 |
+
|
| 25 |
+
- **Developed by:** [More Information Needed]
|
| 26 |
+
- **Funded by [optional]:** [More Information Needed]
|
| 27 |
+
- **Shared by [optional]:** [More Information Needed]
|
| 28 |
+
- **Model type:** [More Information Needed]
|
| 29 |
+
- **Language(s) (NLP):** [More Information Needed]
|
| 30 |
+
- **License:** [More Information Needed]
|
| 31 |
+
- **Finetuned from model [optional]:** [More Information Needed]
|
| 32 |
+
|
| 33 |
+
### Model Sources [optional]
|
| 34 |
+
|
| 35 |
+
<!-- Provide the basic links for the model. -->
|
| 36 |
+
|
| 37 |
+
- **Repository:** [More Information Needed]
|
| 38 |
+
- **Paper [optional]:** [More Information Needed]
|
| 39 |
+
- **Demo [optional]:** [More Information Needed]
|
| 40 |
+
|
| 41 |
+
## Uses
|
| 42 |
+
|
| 43 |
+
<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
|
| 44 |
+
|
| 45 |
+
### Direct Use
|
| 46 |
+
|
| 47 |
+
<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
|
| 48 |
+
|
| 49 |
+
[More Information Needed]
|
| 50 |
+
|
| 51 |
+
### Downstream Use [optional]
|
| 52 |
+
|
| 53 |
+
<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
|
| 54 |
+
|
| 55 |
+
[More Information Needed]
|
| 56 |
+
|
| 57 |
+
### Out-of-Scope Use
|
| 58 |
+
|
| 59 |
+
<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
|
| 60 |
+
|
| 61 |
+
[More Information Needed]
|
| 62 |
+
|
| 63 |
+
## Bias, Risks, and Limitations
|
| 64 |
+
|
| 65 |
+
<!-- This section is meant to convey both technical and sociotechnical limitations. -->
|
| 66 |
+
|
| 67 |
+
[More Information Needed]
|
| 68 |
+
|
| 69 |
+
### Recommendations
|
| 70 |
+
|
| 71 |
+
<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
|
| 72 |
+
|
| 73 |
+
Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
|
| 74 |
+
|
| 75 |
+
## How to Get Started with the Model
|
| 76 |
+
|
| 77 |
+
Use the code below to get started with the model.
|
| 78 |
+
|
| 79 |
+
[More Information Needed]
|
| 80 |
+
|
| 81 |
+
## Training Details
|
| 82 |
+
|
| 83 |
+
### Training Data
|
| 84 |
+
|
| 85 |
+
<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
|
| 86 |
+
|
| 87 |
+
[More Information Needed]
|
| 88 |
+
|
| 89 |
+
### Training Procedure
|
| 90 |
+
|
| 91 |
+
<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
|
| 92 |
+
|
| 93 |
+
#### Preprocessing [optional]
|
| 94 |
+
|
| 95 |
+
[More Information Needed]
|
| 96 |
+
|
| 97 |
+
|
| 98 |
+
#### Training Hyperparameters
|
| 99 |
+
|
| 100 |
+
- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
|
| 101 |
+
|
| 102 |
+
#### Speeds, Sizes, Times [optional]
|
| 103 |
+
|
| 104 |
+
<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
|
| 105 |
+
|
| 106 |
+
[More Information Needed]
|
| 107 |
+
|
| 108 |
+
## Evaluation
|
| 109 |
+
|
| 110 |
+
<!-- This section describes the evaluation protocols and provides the results. -->
|
| 111 |
+
|
| 112 |
+
### Testing Data, Factors & Metrics
|
| 113 |
+
|
| 114 |
+
#### Testing Data
|
| 115 |
+
|
| 116 |
+
<!-- This should link to a Dataset Card if possible. -->
|
| 117 |
+
|
| 118 |
+
[More Information Needed]
|
| 119 |
+
|
| 120 |
+
#### Factors
|
| 121 |
+
|
| 122 |
+
<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
|
| 123 |
+
|
| 124 |
+
[More Information Needed]
|
| 125 |
+
|
| 126 |
+
#### Metrics
|
| 127 |
+
|
| 128 |
+
<!-- These are the evaluation metrics being used, ideally with a description of why. -->
|
| 129 |
+
|
| 130 |
+
[More Information Needed]
|
| 131 |
+
|
| 132 |
+
### Results
|
| 133 |
+
|
| 134 |
+
[More Information Needed]
|
| 135 |
+
|
| 136 |
+
#### Summary
|
| 137 |
+
|
| 138 |
+
|
| 139 |
+
|
| 140 |
+
## Model Examination [optional]
|
| 141 |
+
|
| 142 |
+
<!-- Relevant interpretability work for the model goes here -->
|
| 143 |
+
|
| 144 |
+
[More Information Needed]
|
| 145 |
+
|
| 146 |
+
## Environmental Impact
|
| 147 |
+
|
| 148 |
+
<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
|
| 149 |
+
|
| 150 |
+
Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
|
| 151 |
+
|
| 152 |
+
- **Hardware Type:** [More Information Needed]
|
| 153 |
+
- **Hours used:** [More Information Needed]
|
| 154 |
+
- **Cloud Provider:** [More Information Needed]
|
| 155 |
+
- **Compute Region:** [More Information Needed]
|
| 156 |
+
- **Carbon Emitted:** [More Information Needed]
|
| 157 |
+
|
| 158 |
+
## Technical Specifications [optional]
|
| 159 |
+
|
| 160 |
+
### Model Architecture and Objective
|
| 161 |
+
|
| 162 |
+
[More Information Needed]
|
| 163 |
+
|
| 164 |
+
### Compute Infrastructure
|
| 165 |
+
|
| 166 |
+
[More Information Needed]
|
| 167 |
+
|
| 168 |
+
#### Hardware
|
| 169 |
+
|
| 170 |
+
[More Information Needed]
|
| 171 |
+
|
| 172 |
+
#### Software
|
| 173 |
+
|
| 174 |
+
[More Information Needed]
|
| 175 |
+
|
| 176 |
+
## Citation [optional]
|
| 177 |
+
|
| 178 |
+
<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
|
| 179 |
+
|
| 180 |
+
**BibTeX:**
|
| 181 |
+
|
| 182 |
+
[More Information Needed]
|
| 183 |
+
|
| 184 |
+
**APA:**
|
| 185 |
+
|
| 186 |
+
[More Information Needed]
|
| 187 |
+
|
| 188 |
+
## Glossary [optional]
|
| 189 |
+
|
| 190 |
+
<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
|
| 191 |
+
|
| 192 |
+
[More Information Needed]
|
| 193 |
+
|
| 194 |
+
## More Information [optional]
|
| 195 |
+
|
| 196 |
+
[More Information Needed]
|
| 197 |
+
|
| 198 |
+
## Model Card Authors [optional]
|
| 199 |
+
|
| 200 |
+
[More Information Needed]
|
| 201 |
+
|
| 202 |
+
## Model Card Contact
|
| 203 |
+
|
| 204 |
+
[More Information Needed]
|
| 205 |
+
### Framework versions
|
| 206 |
+
|
| 207 |
+
- PEFT 0.18.1
|
checkpoints/full_training_biomistral/checkpoint-500/adapter_config.json
ADDED
|
@@ -0,0 +1,43 @@
|
|
|
|
|
|
|
|
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|
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|
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|
| 1 |
+
{
|
| 2 |
+
"alora_invocation_tokens": null,
|
| 3 |
+
"alpha_pattern": {},
|
| 4 |
+
"arrow_config": null,
|
| 5 |
+
"auto_mapping": null,
|
| 6 |
+
"base_model_name_or_path": "BioMistral/BioMistral-7B-DARE",
|
| 7 |
+
"bias": "none",
|
| 8 |
+
"corda_config": null,
|
| 9 |
+
"ensure_weight_tying": false,
|
| 10 |
+
"eva_config": null,
|
| 11 |
+
"exclude_modules": null,
|
| 12 |
+
"fan_in_fan_out": false,
|
| 13 |
+
"inference_mode": true,
|
| 14 |
+
"init_lora_weights": true,
|
| 15 |
+
"layer_replication": null,
|
| 16 |
+
"layers_pattern": null,
|
| 17 |
+
"layers_to_transform": null,
|
| 18 |
+
"loftq_config": {},
|
| 19 |
+
"lora_alpha": 64,
|
| 20 |
+
"lora_bias": false,
|
| 21 |
+
"lora_dropout": 0.05,
|
| 22 |
+
"megatron_config": null,
|
| 23 |
+
"megatron_core": "megatron.core",
|
| 24 |
+
"modules_to_save": null,
|
| 25 |
+
"peft_type": "LORA",
|
| 26 |
+
"peft_version": "0.18.1",
|
| 27 |
+
"qalora_group_size": 16,
|
| 28 |
+
"r": 32,
|
| 29 |
+
"rank_pattern": {},
|
| 30 |
+
"revision": null,
|
| 31 |
+
"target_modules": [
|
| 32 |
+
"o_proj",
|
| 33 |
+
"v_proj",
|
| 34 |
+
"q_proj",
|
| 35 |
+
"k_proj"
|
| 36 |
+
],
|
| 37 |
+
"target_parameters": null,
|
| 38 |
+
"task_type": "CAUSAL_LM",
|
| 39 |
+
"trainable_token_indices": null,
|
| 40 |
+
"use_dora": false,
|
| 41 |
+
"use_qalora": false,
|
| 42 |
+
"use_rslora": true
|
| 43 |
+
}
|
checkpoints/full_training_biomistral/checkpoint-500/adapter_model.safetensors
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:6204323279992b5c6fc2d24fdf2cef27faf3b6209f63d0f038340aab19d82cf3
|
| 3 |
+
size 109086416
|
checkpoints/full_training_biomistral/checkpoint-500/chat_template.jinja
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{{ bos_token }}{% for message in messages %}{% if (message['role'] == 'user') != (loop.index0 % 2 == 0) %}{{ raise_exception('Conversation roles must alternate user/assistant/user/assistant/...') }}{% endif %}{% if message['role'] == 'user' %}{{ '[INST] ' + message['content'] + ' [/INST]' }}{% elif message['role'] == 'assistant' %}{{ message['content'] + eos_token + ' ' }}{% else %}{{ raise_exception('Only user and assistant roles are supported!') }}{% endif %}{% endfor %}
|
checkpoints/full_training_biomistral/checkpoint-500/optimizer.pt
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:5babf7fee2a33830ebd6390a7642c28c3f37d27eeeff16bf1466c4c101f4f6d6
|
| 3 |
+
size 218319354
|
checkpoints/full_training_biomistral/checkpoint-500/rng_state.pth
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:c596492a018c7cef2dbfd1400a84c1995bd96ea69ea212fb61301f598a2a0389
|
| 3 |
+
size 14244
|
checkpoints/full_training_biomistral/checkpoint-500/scheduler.pt
ADDED
|
@@ -0,0 +1,3 @@
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|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
+
oid sha256:0485de3bea4b3789196b8fb2a33f53fc4c078162cb5a4ba28365ffa6c77e3227
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| 3 |
+
size 1064
|
checkpoints/full_training_biomistral/checkpoint-500/tokenizer.json
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
checkpoints/full_training_biomistral/checkpoint-500/tokenizer_config.json
ADDED
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|
checkpoints/full_training_biomistral/checkpoint-500/training_args.bin
ADDED
|
@@ -0,0 +1,3 @@
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| 1 |
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version https://git-lfs.github.com/spec/v1
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oid sha256:0d6639d9fd4a2b337584447a5bbe411991aadcadc50dc40e7273e44bf4f7c0db
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| 3 |
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size 4856
|
checkpoints/full_training_llama3/checkpoint-1000/README.md
ADDED
|
@@ -0,0 +1,207 @@
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|
| 1 |
+
---
|
| 2 |
+
base_model: aaditya/Llama3-OpenBioLLM-8B
|
| 3 |
+
library_name: peft
|
| 4 |
+
pipeline_tag: text-generation
|
| 5 |
+
tags:
|
| 6 |
+
- base_model:adapter:aaditya/Llama3-OpenBioLLM-8B
|
| 7 |
+
- lora
|
| 8 |
+
- transformers
|
| 9 |
+
---
|
| 10 |
+
|
| 11 |
+
# Model Card for Model ID
|
| 12 |
+
|
| 13 |
+
<!-- Provide a quick summary of what the model is/does. -->
|
| 14 |
+
|
| 15 |
+
|
| 16 |
+
|
| 17 |
+
## Model Details
|
| 18 |
+
|
| 19 |
+
### Model Description
|
| 20 |
+
|
| 21 |
+
<!-- Provide a longer summary of what this model is. -->
|
| 22 |
+
|
| 23 |
+
|
| 24 |
+
|
| 25 |
+
- **Developed by:** [More Information Needed]
|
| 26 |
+
- **Funded by [optional]:** [More Information Needed]
|
| 27 |
+
- **Shared by [optional]:** [More Information Needed]
|
| 28 |
+
- **Model type:** [More Information Needed]
|
| 29 |
+
- **Language(s) (NLP):** [More Information Needed]
|
| 30 |
+
- **License:** [More Information Needed]
|
| 31 |
+
- **Finetuned from model [optional]:** [More Information Needed]
|
| 32 |
+
|
| 33 |
+
### Model Sources [optional]
|
| 34 |
+
|
| 35 |
+
<!-- Provide the basic links for the model. -->
|
| 36 |
+
|
| 37 |
+
- **Repository:** [More Information Needed]
|
| 38 |
+
- **Paper [optional]:** [More Information Needed]
|
| 39 |
+
- **Demo [optional]:** [More Information Needed]
|
| 40 |
+
|
| 41 |
+
## Uses
|
| 42 |
+
|
| 43 |
+
<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
|
| 44 |
+
|
| 45 |
+
### Direct Use
|
| 46 |
+
|
| 47 |
+
<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
|
| 48 |
+
|
| 49 |
+
[More Information Needed]
|
| 50 |
+
|
| 51 |
+
### Downstream Use [optional]
|
| 52 |
+
|
| 53 |
+
<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
|
| 54 |
+
|
| 55 |
+
[More Information Needed]
|
| 56 |
+
|
| 57 |
+
### Out-of-Scope Use
|
| 58 |
+
|
| 59 |
+
<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
|
| 60 |
+
|
| 61 |
+
[More Information Needed]
|
| 62 |
+
|
| 63 |
+
## Bias, Risks, and Limitations
|
| 64 |
+
|
| 65 |
+
<!-- This section is meant to convey both technical and sociotechnical limitations. -->
|
| 66 |
+
|
| 67 |
+
[More Information Needed]
|
| 68 |
+
|
| 69 |
+
### Recommendations
|
| 70 |
+
|
| 71 |
+
<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
|
| 72 |
+
|
| 73 |
+
Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
|
| 74 |
+
|
| 75 |
+
## How to Get Started with the Model
|
| 76 |
+
|
| 77 |
+
Use the code below to get started with the model.
|
| 78 |
+
|
| 79 |
+
[More Information Needed]
|
| 80 |
+
|
| 81 |
+
## Training Details
|
| 82 |
+
|
| 83 |
+
### Training Data
|
| 84 |
+
|
| 85 |
+
<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
|
| 86 |
+
|
| 87 |
+
[More Information Needed]
|
| 88 |
+
|
| 89 |
+
### Training Procedure
|
| 90 |
+
|
| 91 |
+
<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
|
| 92 |
+
|
| 93 |
+
#### Preprocessing [optional]
|
| 94 |
+
|
| 95 |
+
[More Information Needed]
|
| 96 |
+
|
| 97 |
+
|
| 98 |
+
#### Training Hyperparameters
|
| 99 |
+
|
| 100 |
+
- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
|
| 101 |
+
|
| 102 |
+
#### Speeds, Sizes, Times [optional]
|
| 103 |
+
|
| 104 |
+
<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
|
| 105 |
+
|
| 106 |
+
[More Information Needed]
|
| 107 |
+
|
| 108 |
+
## Evaluation
|
| 109 |
+
|
| 110 |
+
<!-- This section describes the evaluation protocols and provides the results. -->
|
| 111 |
+
|
| 112 |
+
### Testing Data, Factors & Metrics
|
| 113 |
+
|
| 114 |
+
#### Testing Data
|
| 115 |
+
|
| 116 |
+
<!-- This should link to a Dataset Card if possible. -->
|
| 117 |
+
|
| 118 |
+
[More Information Needed]
|
| 119 |
+
|
| 120 |
+
#### Factors
|
| 121 |
+
|
| 122 |
+
<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
|
| 123 |
+
|
| 124 |
+
[More Information Needed]
|
| 125 |
+
|
| 126 |
+
#### Metrics
|
| 127 |
+
|
| 128 |
+
<!-- These are the evaluation metrics being used, ideally with a description of why. -->
|
| 129 |
+
|
| 130 |
+
[More Information Needed]
|
| 131 |
+
|
| 132 |
+
### Results
|
| 133 |
+
|
| 134 |
+
[More Information Needed]
|
| 135 |
+
|
| 136 |
+
#### Summary
|
| 137 |
+
|
| 138 |
+
|
| 139 |
+
|
| 140 |
+
## Model Examination [optional]
|
| 141 |
+
|
| 142 |
+
<!-- Relevant interpretability work for the model goes here -->
|
| 143 |
+
|
| 144 |
+
[More Information Needed]
|
| 145 |
+
|
| 146 |
+
## Environmental Impact
|
| 147 |
+
|
| 148 |
+
<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
|
| 149 |
+
|
| 150 |
+
Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
|
| 151 |
+
|
| 152 |
+
- **Hardware Type:** [More Information Needed]
|
| 153 |
+
- **Hours used:** [More Information Needed]
|
| 154 |
+
- **Cloud Provider:** [More Information Needed]
|
| 155 |
+
- **Compute Region:** [More Information Needed]
|
| 156 |
+
- **Carbon Emitted:** [More Information Needed]
|
| 157 |
+
|
| 158 |
+
## Technical Specifications [optional]
|
| 159 |
+
|
| 160 |
+
### Model Architecture and Objective
|
| 161 |
+
|
| 162 |
+
[More Information Needed]
|
| 163 |
+
|
| 164 |
+
### Compute Infrastructure
|
| 165 |
+
|
| 166 |
+
[More Information Needed]
|
| 167 |
+
|
| 168 |
+
#### Hardware
|
| 169 |
+
|
| 170 |
+
[More Information Needed]
|
| 171 |
+
|
| 172 |
+
#### Software
|
| 173 |
+
|
| 174 |
+
[More Information Needed]
|
| 175 |
+
|
| 176 |
+
## Citation [optional]
|
| 177 |
+
|
| 178 |
+
<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
|
| 179 |
+
|
| 180 |
+
**BibTeX:**
|
| 181 |
+
|
| 182 |
+
[More Information Needed]
|
| 183 |
+
|
| 184 |
+
**APA:**
|
| 185 |
+
|
| 186 |
+
[More Information Needed]
|
| 187 |
+
|
| 188 |
+
## Glossary [optional]
|
| 189 |
+
|
| 190 |
+
<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
|
| 191 |
+
|
| 192 |
+
[More Information Needed]
|
| 193 |
+
|
| 194 |
+
## More Information [optional]
|
| 195 |
+
|
| 196 |
+
[More Information Needed]
|
| 197 |
+
|
| 198 |
+
## Model Card Authors [optional]
|
| 199 |
+
|
| 200 |
+
[More Information Needed]
|
| 201 |
+
|
| 202 |
+
## Model Card Contact
|
| 203 |
+
|
| 204 |
+
[More Information Needed]
|
| 205 |
+
### Framework versions
|
| 206 |
+
|
| 207 |
+
- PEFT 0.18.1
|
checkpoints/full_training_llama3/checkpoint-1000/adapter_config.json
ADDED
|
@@ -0,0 +1,43 @@
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| 41 |
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| 42 |
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"use_rslora": true
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| 43 |
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checkpoints/full_training_llama3/checkpoint-1000/adapter_model.safetensors
ADDED
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