| | from setuptools import find_packages, setup |
| |
|
| | setup( |
| | name='TransfoRNA', |
| | version='0.0.1', |
| | description='TransfoRNA: Navigating the Uncertainties of Small RNA Annotation with an Adaptive Machine Learning Strategy', |
| | url='https://github.com/gitHBDX/TransfoRNA', |
| | author='YasserTaha,JuliaJehn', |
| | author_email='ytaha@hb-dx.com,jjehn@hb-dx.com,tsikosek@hb-dx.com', |
| | classifiers=[ |
| | 'Development Status :: 4 - Beta', |
| | 'Intended Audience :: Biological Researchers', |
| | 'License :: OSI Approved :: MIT License', |
| | 'Programming Language :: Python :: 3.9', |
| | ], |
| | packages=find_packages(include=['transforna', 'transforna.*']), |
| | install_requires=[ |
| | "anndata==0.8.0", |
| | "dill==0.3.6", |
| | "hydra-core==1.3.0", |
| | "imbalanced-learn==0.9.1", |
| | "matplotlib==3.5.3", |
| | "numpy==1.22.3", |
| | "omegaconf==2.2.2", |
| | "pandas==1.5.2", |
| | "plotly==5.10.0", |
| | "PyYAML==6.0", |
| | "rich==12.6.0", |
| | "viennarna>=2.5.0a5", |
| | "scanpy==1.9.1", |
| | "scikit_learn==1.2.0", |
| | "skorch==0.12.1", |
| | "torch==1.10.1", |
| | "tensorboard==2.16.2", |
| | "Levenshtein==0.21.0" |
| | ], |
| | python_requires='>=3.9', |
| | |
| | package_data={'': ['*.yaml']}, |
| | ) |
| |
|
