Daniel Eddie Rollins commited on
Commit ·
ce45a3b
1
Parent(s): 57d7d49
Update model card.
Browse files
README.md
CHANGED
|
@@ -34,7 +34,8 @@ The afMLevel repository includes tools for:
|
|
| 34 |
- integrating the model into AFM anasis workflows.
|
| 35 |
|
| 36 |
- **Developed by:** Maya Tekchandani
|
| 37 |
-
- **
|
|
|
|
| 38 |
- **Principal Investigator:** Dr George R. Heath
|
| 39 |
- **Affiliation:** University of Leeds
|
| 40 |
- **Funded by [optional]:** [More Information Needed]
|
|
@@ -47,7 +48,7 @@ The afMLevel repository includes tools for:
|
|
| 47 |
|
| 48 |
- **Repository:** https://github.com/mayatek1/afMLevel
|
| 49 |
- **Paper:** In preparation
|
| 50 |
-
- **Demo
|
| 51 |
|
| 52 |
## Uses
|
| 53 |
|
|
@@ -61,8 +62,8 @@ The model has been primarily tested on **biological AFM data**. It may generalis
|
|
| 61 |
|
| 62 |
### Downstream Use
|
| 63 |
|
| 64 |
-
- Integration into
|
| 65 |
-
-
|
| 66 |
- Preprocessing for segmentation, particle detection, or other AFM analysis tools.
|
| 67 |
|
| 68 |
### Out‑of‑Scope Use
|
|
@@ -88,7 +89,8 @@ This model is **not** intended for:
|
|
| 88 |
|
| 89 |
## How to Get Started with the Model
|
| 90 |
|
| 91 |
-
Use the model through the [afMLevel](https://github.com/mayatek1/afMLevel) repository, which handles background prediction, subtraction, and output generation. Demonstration notebooks are
|
|
|
|
| 92 |
|
| 93 |
## Training Details
|
| 94 |
|
|
|
|
| 34 |
- integrating the model into AFM anasis workflows.
|
| 35 |
|
| 36 |
- **Developed by:** Maya Tekchandani
|
| 37 |
+
- **Developed by:** Maya Tekchandani
|
| 38 |
+
- **Maintained by:** Dr Daniel E. Rollins, Dr George R. Heath
|
| 39 |
- **Principal Investigator:** Dr George R. Heath
|
| 40 |
- **Affiliation:** University of Leeds
|
| 41 |
- **Funded by [optional]:** [More Information Needed]
|
|
|
|
| 48 |
|
| 49 |
- **Repository:** https://github.com/mayatek1/afMLevel
|
| 50 |
- **Paper:** In preparation
|
| 51 |
+
- **Demo:** [Demonstration notebooks](https://github.com/mayatek1/afMLevel/tree/main/notebooks)
|
| 52 |
|
| 53 |
## Uses
|
| 54 |
|
|
|
|
| 62 |
|
| 63 |
### Downstream Use
|
| 64 |
|
| 65 |
+
- Integration into [playnano](https://github.com/derollins/playNano), enabling end‑to‑end reading and levelling of **high‑speed AFM videos**,
|
| 66 |
+
- The `afMLevel` package works as plugin for `playnano` for easy integration,
|
| 67 |
- Preprocessing for segmentation, particle detection, or other AFM analysis tools.
|
| 68 |
|
| 69 |
### Out‑of‑Scope Use
|
|
|
|
| 89 |
|
| 90 |
## How to Get Started with the Model
|
| 91 |
|
| 92 |
+
Use the model through the [afMLevel](https://github.com/mayatek1/afMLevel) repository, which handles background prediction, subtraction, and output generation. Demonstration notebooks are available
|
| 93 |
+
[within the GitHUb repository](https://github.com/mayatek1/afMLevel/tree/main/notebooks).
|
| 94 |
|
| 95 |
## Training Details
|
| 96 |
|