Text Generation
Transformers
Safetensors
English
qwen3
dna
genomics
biology
variant-effect-prediction
conversational
text-generation-inference
Instructions to use HuggingFaceBio/Carbon-X with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- Transformers
How to use HuggingFaceBio/Carbon-X with Transformers:
# Use a pipeline as a high-level helper from transformers import pipeline pipe = pipeline("text-generation", model="HuggingFaceBio/Carbon-X") messages = [ {"role": "user", "content": "Who are you?"}, ] pipe(messages)# pip install -U transformers accelerate # Load model directly from transformers import AutoTokenizer, AutoModelForCausalLM tokenizer = AutoTokenizer.from_pretrained("HuggingFaceBio/Carbon-X") model = AutoModelForCausalLM.from_pretrained("HuggingFaceBio/Carbon-X", device_map="auto") messages = [ {"role": "user", "content": "Who are you?"}, ] inputs = tokenizer.apply_chat_template( messages, add_generation_prompt=True, tokenize=True, return_dict=True, return_tensors="pt", ).to(model.device) outputs = model.generate(**inputs, max_new_tokens=256) print(tokenizer.decode(outputs[0][inputs["input_ids"].shape[-1]:])) - Notebooks
- Google Colab
- Kaggle
- Local Apps Settings
- vLLM
How to use HuggingFaceBio/Carbon-X with vLLM:
Install from pip and serve model
# Install vLLM from pip: pip install vllm # Start the vLLM server: vllm serve "HuggingFaceBio/Carbon-X" # Call the server using curl (OpenAI-compatible API): curl -X POST "http://localhost:8000/v1/chat/completions" \ -H "Content-Type: application/json" \ --data '{ "model": "HuggingFaceBio/Carbon-X", "messages": [ { "role": "user", "content": "What is the capital of France?" } ] }'Use Docker
docker model run hf.co/HuggingFaceBio/Carbon-X
- SGLang
How to use HuggingFaceBio/Carbon-X with SGLang:
Install from pip and serve model
# Install SGLang from pip: pip install sglang # Start the SGLang server: python3 -m sglang.launch_server \ --model-path "HuggingFaceBio/Carbon-X" \ --host 0.0.0.0 \ --port 30000 # Call the server using curl (OpenAI-compatible API): curl -X POST "http://localhost:30000/v1/chat/completions" \ -H "Content-Type: application/json" \ --data '{ "model": "HuggingFaceBio/Carbon-X", "messages": [ { "role": "user", "content": "What is the capital of France?" } ] }'Use Docker images
docker run --gpus all \ --shm-size 32g \ -p 30000:30000 \ -v ~/.cache/huggingface:/root/.cache/huggingface \ --env "HF_TOKEN=<secret>" \ --ipc=host \ lmsysorg/sglang:latest \ python3 -m sglang.launch_server \ --model-path "HuggingFaceBio/Carbon-X" \ --host 0.0.0.0 \ --port 30000 # Call the server using curl (OpenAI-compatible API): curl -X POST "http://localhost:30000/v1/chat/completions" \ -H "Content-Type: application/json" \ --data '{ "model": "HuggingFaceBio/Carbon-X", "messages": [ { "role": "user", "content": "What is the capital of France?" } ] }' - Docker Model Runner
How to use HuggingFaceBio/Carbon-X with Docker Model Runner:
docker model run hf.co/HuggingFaceBio/Carbon-X
Commit History
Yesterday
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Model card: move the agent-tool section before Limitations; add examples and the carbon-dna skill
Verified signatureFollow-up to #1, which was merged before these changes: - Moves **Using Carbon-X as a tool for an agent** before Limitations (and in the table of contents). - Keeps only the short `ask_carbon` function inline and links ready-to-run examples instead of inlining them. - Removes the A/C/G/T tip. New files: - `examples/agent_tool.py`: an OpenAI-style tool that passes DNA by reference, plus a minimal agent loop, for any chat model with tool calling. - `examples/inspect_agent.py`: an Inspect `@tool` and `react()` agent, with each sample's DNA kept in metadata. - `skills/carbon-dna/`: a skill for Claude Code and Codex CLI. `SKILL.md` plus a standard-library script with `ask` and `compare`, configured with `CARBON_BASE_URL`.b3f11f8