Commit ·
825d6b3
0
Parent(s):
Duplicate from IDEA-AI4SCI/AbLingua
Browse filesCo-authored-by: C2C <didididadada@users.noreply.huggingface.co>
- .gitattributes +35 -0
- README.md +9 -0
- config.json +24 -0
- model.safetensors +3 -0
- pytorch_model.bin +3 -0
.gitattributes
ADDED
|
@@ -0,0 +1,35 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
*.7z filter=lfs diff=lfs merge=lfs -text
|
| 2 |
+
*.arrow filter=lfs diff=lfs merge=lfs -text
|
| 3 |
+
*.bin filter=lfs diff=lfs merge=lfs -text
|
| 4 |
+
*.bz2 filter=lfs diff=lfs merge=lfs -text
|
| 5 |
+
*.ckpt filter=lfs diff=lfs merge=lfs -text
|
| 6 |
+
*.ftz filter=lfs diff=lfs merge=lfs -text
|
| 7 |
+
*.gz filter=lfs diff=lfs merge=lfs -text
|
| 8 |
+
*.h5 filter=lfs diff=lfs merge=lfs -text
|
| 9 |
+
*.joblib filter=lfs diff=lfs merge=lfs -text
|
| 10 |
+
*.lfs.* filter=lfs diff=lfs merge=lfs -text
|
| 11 |
+
*.mlmodel filter=lfs diff=lfs merge=lfs -text
|
| 12 |
+
*.model filter=lfs diff=lfs merge=lfs -text
|
| 13 |
+
*.msgpack filter=lfs diff=lfs merge=lfs -text
|
| 14 |
+
*.npy filter=lfs diff=lfs merge=lfs -text
|
| 15 |
+
*.npz filter=lfs diff=lfs merge=lfs -text
|
| 16 |
+
*.onnx filter=lfs diff=lfs merge=lfs -text
|
| 17 |
+
*.ot filter=lfs diff=lfs merge=lfs -text
|
| 18 |
+
*.parquet filter=lfs diff=lfs merge=lfs -text
|
| 19 |
+
*.pb filter=lfs diff=lfs merge=lfs -text
|
| 20 |
+
*.pickle filter=lfs diff=lfs merge=lfs -text
|
| 21 |
+
*.pkl filter=lfs diff=lfs merge=lfs -text
|
| 22 |
+
*.pt filter=lfs diff=lfs merge=lfs -text
|
| 23 |
+
*.pth filter=lfs diff=lfs merge=lfs -text
|
| 24 |
+
*.rar filter=lfs diff=lfs merge=lfs -text
|
| 25 |
+
*.safetensors filter=lfs diff=lfs merge=lfs -text
|
| 26 |
+
saved_model/**/* filter=lfs diff=lfs merge=lfs -text
|
| 27 |
+
*.tar.* filter=lfs diff=lfs merge=lfs -text
|
| 28 |
+
*.tar filter=lfs diff=lfs merge=lfs -text
|
| 29 |
+
*.tflite filter=lfs diff=lfs merge=lfs -text
|
| 30 |
+
*.tgz filter=lfs diff=lfs merge=lfs -text
|
| 31 |
+
*.wasm filter=lfs diff=lfs merge=lfs -text
|
| 32 |
+
*.xz filter=lfs diff=lfs merge=lfs -text
|
| 33 |
+
*.zip filter=lfs diff=lfs merge=lfs -text
|
| 34 |
+
*.zst filter=lfs diff=lfs merge=lfs -text
|
| 35 |
+
*tfevents* filter=lfs diff=lfs merge=lfs -text
|
README.md
ADDED
|
@@ -0,0 +1,9 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
---
|
| 2 |
+
license: apache-2.0
|
| 3 |
+
tags:
|
| 4 |
+
- biology
|
| 5 |
+
---
|
| 6 |
+
|
| 7 |
+
# AbLingua
|
| 8 |
+
|
| 9 |
+
AbLigngua is a state-of-the-art antibody language model trained on a masked language modelling objective. It is suitable for fine-tuning on a wide range of tasks that take antibody sequences as input.
|
config.json
ADDED
|
@@ -0,0 +1,24 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"architectures": [
|
| 3 |
+
"BertForMaskedLM"
|
| 4 |
+
],
|
| 5 |
+
"attention_probs_dropout_prob": 0.1,
|
| 6 |
+
"classifier_dropout": null,
|
| 7 |
+
"hidden_act": "gelu",
|
| 8 |
+
"hidden_dropout_prob": 0.1,
|
| 9 |
+
"hidden_size": 1280,
|
| 10 |
+
"initializer_range": 0.01,
|
| 11 |
+
"intermediate_size": 5120,
|
| 12 |
+
"layer_norm_eps": 1e-12,
|
| 13 |
+
"max_position_embeddings": 256,
|
| 14 |
+
"model_type": "bert",
|
| 15 |
+
"num_attention_heads": 20,
|
| 16 |
+
"num_hidden_layers": 30,
|
| 17 |
+
"pad_token_id": 0,
|
| 18 |
+
"position_embedding_type": "relative_key_query",
|
| 19 |
+
"torch_dtype": "float32",
|
| 20 |
+
"transformers_version": "4.23.1",
|
| 21 |
+
"type_vocab_size": 2,
|
| 22 |
+
"use_cache": true,
|
| 23 |
+
"vocab_size": 18950
|
| 24 |
+
}
|
model.safetensors
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:86599a24ef9c3a036980ac4d64efd621ca0e0e5fba194a714b809203c9ae6385
|
| 3 |
+
size 2470282648
|
pytorch_model.bin
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:9a1ff360c3227274bc4575fc95e41635edf8818764622c5c84cd763c37dfdb48
|
| 3 |
+
size 2470387439
|