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.gitattributes CHANGED
@@ -33,3 +33,4 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
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  *.zip filter=lfs diff=lfs merge=lfs -text
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  *.zst filter=lfs diff=lfs merge=lfs -text
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  *tfevents* filter=lfs diff=lfs merge=lfs -text
 
 
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  *.zip filter=lfs diff=lfs merge=lfs -text
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  *.zst filter=lfs diff=lfs merge=lfs -text
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  *tfevents* filter=lfs diff=lfs merge=lfs -text
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+ tokenizer.json filter=lfs diff=lfs merge=lfs -text
README.md ADDED
@@ -0,0 +1,72 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ ---
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+ license: apache-2.0
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+ base_model: Qwen/Qwen3.6-35B-A3B
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+ pipeline_tag: image-text-to-text
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+ tags:
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+ - vision-language-model
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+ - medical
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+ - brain-ct
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+ - stroke
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+ - lora-merged
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+ language:
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+ - en
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+ - ko
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+ library_name: transformers
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+ ---
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+
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+ # Stroke CT Region Classifier — Qwen3.6-35B-A3B (v5, coarse labels)
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+
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+ 뇌 CT summary 영상에서 병변의 **해부학적 영역(anatomical)** 과 **혈관 영역(vascular)** 을
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+ coarse 라벨로 분류해 구조화 JSON으로 출력하는 의료 특화 Vision-Language Model.
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+
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+ - **Base model**: `Qwen/Qwen3.6-35B-A3B` (MoE VLM, 35B total / ~3B active, `qwen3_5_moe`)
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+ - **Method**: LoRA (r=8, α=16, attention `q/k/v/o_proj`) → **베이스에 병합된 풀모델**
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+ - **Input**: PNG (CT summary 영상) · **Output**: `{"anatomical_regions": [...], "vascular_territories": [...]}`
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+ - **Labels (coarse, L/R 유지)**: anatomical 23그룹 / vascular 14그룹
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+ - **과제**: RQT-25-090047 (㈜제이엘케이) — 다중 모달 AI 뇌졸중 특화 임상지원 LLM
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+
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+ ## 성능 (CTI subset, n=2,108)
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+
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+ | 지표 | 값 |
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+ |---|---|
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+ | Anatomical F1 | **0.741** |
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+ | Vascular F1 | **0.802** |
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+ | 평균 F1 | **0.771** |
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+ | Empty Acc | 1.000 |
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+
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+ 전체 test(n=12,140): anatomical 0.641 / vascular 0.757.
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+
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+ > 참고: BLEU/METEOR/BERTScore/G-Eval은 영역 라벨을 텍스트로 직렬화해 측정한 보조 지표로,
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+ > 자유텍스트 판독문 평가와 측정 대상이 다름.
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+
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+ ## 사용법
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+
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+ ```python
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+ from transformers import AutoModelForImageTextToText, AutoProcessor
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+ from PIL import Image
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+
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+ model_id = "<this-repo>"
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+ model = AutoModelForImageTextToText.from_pretrained(model_id, torch_dtype="bfloat16", device_map="auto")
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+ processor = AutoProcessor.from_pretrained(model_id)
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+
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+ img = Image.open("ct_summary.png").convert("RGB")
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+ prompt = "주어진 CT summary 이미지에서 병변이 속하는 anatomical region과 vascular territory를 JSON으로 답하라."
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+ messages = [{"role": "user", "content": [{"type": "image", "image": img}, {"type": "text", "text": prompt}]}]
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+ text = processor.apply_chat_template(messages, tokenize=False, add_generation_prompt=True, enable_thinking=False)
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+ inputs = processor(text=[text], images=[img], return_tensors="pt").to(model.device)
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+ out = model.generate(**inputs, max_new_tokens=256, do_sample=False)
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+ print(processor.tokenizer.decode(out[0, inputs["input_ids"].shape[1]:], skip_special_tokens=True))
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+ ```
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+
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+ > 추론 시 `enable_thinking=False` 권장 (학습 템플릿과 일치).
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+
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+ ## 학습 정보
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+
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+ - 1 epoch (6,778 steps), bf16, 4×H100, DeepSpeed ZeRO-2
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+ - 학습 데이터: CT summary PNG + 영역 라벨 JSON (positive 216,874 샘플)
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+ - train_loss 0.90 → 0.13
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+
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+ ## 한계
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+
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+ - 심부·소형 구조(ventricle/occipital/limbic/brainstem)의 recall이 상대적으로 낮음 (영상 해상도 영향).
72
+ - 의료용 연구 모델로, 임상 의사결정의 단독 근거로 사용 금지.
chat_template.jinja ADDED
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1
+ {%- set image_count = namespace(value=0) %}
2
+ {%- set video_count = namespace(value=0) %}
3
+ {%- macro render_content(content, do_vision_count, is_system_content=false) %}
4
+ {%- if content is string %}
5
+ {{- content }}
6
+ {%- elif content is iterable and content is not mapping %}
7
+ {%- for item in content %}
8
+ {%- if 'image' in item or 'image_url' in item or item.type == 'image' %}
9
+ {%- if is_system_content %}
10
+ {{- raise_exception('System message cannot contain images.') }}
11
+ {%- endif %}
12
+ {%- if do_vision_count %}
13
+ {%- set image_count.value = image_count.value + 1 %}
14
+ {%- endif %}
15
+ {%- if add_vision_id %}
16
+ {{- 'Picture ' ~ image_count.value ~ ': ' }}
17
+ {%- endif %}
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+ {{- '<|vision_start|><|image_pad|><|vision_end|>' }}
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+ {%- elif 'video' in item or item.type == 'video' %}
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+ {%- if is_system_content %}
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+ {{- raise_exception('System message cannot contain videos.') }}
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+ {%- endif %}
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+ {%- if do_vision_count %}
24
+ {%- set video_count.value = video_count.value + 1 %}
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+ {%- endif %}
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+ {%- if add_vision_id %}
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+ {{- 'Video ' ~ video_count.value ~ ': ' }}
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+ {%- endif %}
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+ {{- '<|vision_start|><|video_pad|><|vision_end|>' }}
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+ {%- elif 'text' in item %}
31
+ {{- item.text }}
32
+ {%- else %}
33
+ {{- raise_exception('Unexpected item type in content.') }}
34
+ {%- endif %}
35
+ {%- endfor %}
36
+ {%- elif content is none or content is undefined %}
37
+ {{- '' }}
38
+ {%- else %}
39
+ {{- raise_exception('Unexpected content type.') }}
40
+ {%- endif %}
41
+ {%- endmacro %}
42
+ {%- if not messages %}
43
+ {{- raise_exception('No messages provided.') }}
44
+ {%- endif %}
45
+ {%- if tools and tools is iterable and tools is not mapping %}
46
+ {{- '<|im_start|>system\n' }}
47
+ {{- "# Tools\n\nYou have access to the following functions:\n\n<tools>" }}
48
+ {%- for tool in tools %}
49
+ {{- "\n" }}
50
+ {{- tool | tojson }}
51
+ {%- endfor %}
52
+ {{- "\n</tools>" }}
53
+ {{- '\n\nIf you choose to call a function ONLY reply in the following format with NO suffix:\n\n<tool_call>\n<function=example_function_name>\n<parameter=example_parameter_1>\nvalue_1\n</parameter>\n<parameter=example_parameter_2>\nThis is the value for the second parameter\nthat can span\nmultiple lines\n</parameter>\n</function>\n</tool_call>\n\n<IMPORTANT>\nReminder:\n- Function calls MUST follow the specified format: an inner <function=...></function> block must be nested within <tool_call></tool_call> XML tags\n- Required parameters MUST be specified\n- You may provide optional reasoning for your function call in natural language BEFORE the function call, but NOT after\n- If there is no function call available, answer the question like normal with your current knowledge and do not tell the user about function calls\n</IMPORTANT>' }}
54
+ {%- if messages[0].role == 'system' %}
55
+ {%- set content = render_content(messages[0].content, false, true)|trim %}
56
+ {%- if content %}
57
+ {{- '\n\n' + content }}
58
+ {%- endif %}
59
+ {%- endif %}
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+ {{- '<|im_end|>\n' }}
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+ {%- else %}
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+ {%- if messages[0].role == 'system' %}
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+ {%- set content = render_content(messages[0].content, false, true)|trim %}
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+ {{- '<|im_start|>system\n' + content + '<|im_end|>\n' }}
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+ {%- endif %}
66
+ {%- endif %}
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+ {%- set ns = namespace(multi_step_tool=true, last_query_index=messages|length - 1) %}
68
+ {%- for message in messages[::-1] %}
69
+ {%- set index = (messages|length - 1) - loop.index0 %}
70
+ {%- if ns.multi_step_tool and message.role == "user" %}
71
+ {%- set content = render_content(message.content, false)|trim %}
72
+ {%- if not(content.startswith('<tool_response>') and content.endswith('</tool_response>')) %}
73
+ {%- set ns.multi_step_tool = false %}
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+ {%- set ns.last_query_index = index %}
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+ {%- endif %}
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+ {%- endif %}
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+ {%- endfor %}
78
+ {%- if ns.multi_step_tool %}
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+ {{- raise_exception('No user query found in messages.') }}
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+ {%- endif %}
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+ {%- for message in messages %}
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+ {%- set content = render_content(message.content, true)|trim %}
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+ {%- if message.role == "system" %}
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+ {%- if not loop.first %}
85
+ {{- raise_exception('System message must be at the beginning.') }}
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+ {%- endif %}
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+ {%- elif message.role == "user" %}
88
+ {{- '<|im_start|>' + message.role + '\n' + content + '<|im_end|>' + '\n' }}
89
+ {%- elif message.role == "assistant" %}
90
+ {%- set reasoning_content = '' %}
91
+ {%- if message.reasoning_content is string %}
92
+ {%- set reasoning_content = message.reasoning_content %}
93
+ {%- else %}
94
+ {%- if '</think>' in content %}
95
+ {%- set reasoning_content = content.split('</think>')[0].rstrip('\n').split('<think>')[-1].lstrip('\n') %}
96
+ {%- set content = content.split('</think>')[-1].lstrip('\n') %}
97
+ {%- endif %}
98
+ {%- endif %}
99
+ {%- set reasoning_content = reasoning_content|trim %}
100
+ {%- if (preserve_thinking is defined and preserve_thinking is true) or (loop.index0 > ns.last_query_index) %}
101
+ {{- '<|im_start|>' + message.role + '\n<think>\n' + reasoning_content + '\n</think>\n\n' + content }}
102
+ {%- else %}
103
+ {{- '<|im_start|>' + message.role + '\n' + content }}
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+ {%- endif %}
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+ {%- if message.tool_calls and message.tool_calls is iterable and message.tool_calls is not mapping %}
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+ {%- for tool_call in message.tool_calls %}
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+ {%- if tool_call.function is defined %}
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+ {%- set tool_call = tool_call.function %}
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+ {%- endif %}
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+ {%- if loop.first %}
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+ {%- if content|trim %}
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+ {{- '\n\n<tool_call>\n<function=' + tool_call.name + '>\n' }}
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+ {%- else %}
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+ {{- '<tool_call>\n<function=' + tool_call.name + '>\n' }}
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+ {%- endif %}
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+ {%- else %}
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+ {{- '\n<tool_call>\n<function=' + tool_call.name + '>\n' }}
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+ {%- endif %}
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+ {%- if tool_call.arguments is defined %}
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+ {%- for args_name, args_value in tool_call.arguments|items %}
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+ {{- '<parameter=' + args_name + '>\n' }}
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+ {%- set args_value = args_value | string if args_value is string else args_value | tojson | safe %}
123
+ {{- args_value }}
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+ {{- '\n</parameter>\n' }}
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+ {%- endfor %}
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+ {%- endif %}
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+ {{- '</function>\n</tool_call>' }}
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+ {%- endfor %}
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+ {%- endif %}
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+ {{- '<|im_end|>\n' }}
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+ {%- elif message.role == "tool" %}
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+ {%- if loop.previtem and loop.previtem.role != "tool" %}
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+ {{- '<|im_start|>user' }}
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+ {%- endif %}
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+ {{- '\n<tool_response>\n' }}
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+ {{- content }}
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+ {{- '\n</tool_response>' }}
138
+ {%- if not loop.last and loop.nextitem.role != "tool" %}
139
+ {{- '<|im_end|>\n' }}
140
+ {%- elif loop.last %}
141
+ {{- '<|im_end|>\n' }}
142
+ {%- endif %}
143
+ {%- else %}
144
+ {{- raise_exception('Unexpected message role.') }}
145
+ {%- endif %}
146
+ {%- endfor %}
147
+ {%- if add_generation_prompt %}
148
+ {{- '<|im_start|>assistant\n' }}
149
+ {%- if enable_thinking is defined and enable_thinking is false %}
150
+ {{- '<think>\n\n</think>\n\n' }}
151
+ {%- else %}
152
+ {{- '<think>\n' }}
153
+ {%- endif %}
154
+ {%- endif %}
config.json ADDED
@@ -0,0 +1,121 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ {
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+ "architectures": [
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+ "Qwen3_5MoeForConditionalGeneration"
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+ ],
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+ "dtype": "bfloat16",
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+ "image_token_id": 248056,
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+ "model_type": "qwen3_5_moe",
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+ "text_config": {
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+ "attention_bias": false,
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+ "attention_dropout": 0.0,
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+ "attn_output_gate": true,
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+ "bos_token_id": 248044,
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+ "dtype": "bfloat16",
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+ "eos_token_id": 248044,
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+ "full_attention_interval": 4,
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+ "head_dim": 256,
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+ "hidden_act": "silu",
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+ "hidden_size": 2048,
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+ "initializer_range": 0.02,
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+ "layer_types": [
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+ "linear_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "full_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "full_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "full_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "full_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "full_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "full_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "full_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "full_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "full_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "linear_attention",
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+ "full_attention"
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+ ],
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+ "linear_conv_kernel_dim": 4,
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+ "linear_key_head_dim": 128,
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+ "linear_num_key_heads": 16,
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+ "linear_num_value_heads": 32,
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+ "linear_value_head_dim": 128,
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+ "mamba_ssm_dtype": "float32",
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+ "max_position_embeddings": 262144,
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+ "model_type": "qwen3_5_moe_text",
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+ "moe_intermediate_size": 512,
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+ "mtp_num_hidden_layers": 1,
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+ "mtp_use_dedicated_embeddings": false,
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+ "num_attention_heads": 16,
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+ "num_experts": 256,
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+ "num_experts_per_tok": 8,
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+ "num_hidden_layers": 40,
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+ "num_key_value_heads": 2,
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+ "output_router_logits": false,
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+ "pad_token_id": null,
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+ "partial_rotary_factor": 0.25,
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+ "rms_norm_eps": 1e-06,
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+ "rope_parameters": {
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+ "mrope_interleaved": true,
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+ "mrope_section": [
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+ 11,
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+ 11,
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+ 10
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+ ],
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+ "partial_rotary_factor": 0.25,
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+ "rope_theta": 10000000,
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+ "rope_type": "default"
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+ },
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+ "router_aux_loss_coef": 0.001,
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+ "shared_expert_intermediate_size": 512,
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+ "tie_word_embeddings": false,
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+ "use_cache": true,
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+ "vocab_size": 248320
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+ },
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+ "tie_word_embeddings": false,
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+ "transformers_version": "5.5.0",
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+ "video_token_id": 248057,
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+ "vision_config": {
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+ "deepstack_visual_indexes": [],
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+ "depth": 27,
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+ "dtype": "bfloat16",
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+ "hidden_act": "gelu_pytorch_tanh",
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+ "hidden_size": 1152,
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+ "in_channels": 3,
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+ "initializer_range": 0.02,
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+ "intermediate_size": 4304,
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+ "model_type": "qwen3_5_moe",
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+ "num_heads": 16,
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+ "num_position_embeddings": 2304,
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+ "out_hidden_size": 2048,
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+ "patch_size": 16,
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+ "spatial_merge_size": 2,
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+ "temporal_patch_size": 2
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+ },
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+ "vision_end_token_id": 248054,
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+ "vision_start_token_id": 248053
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+ }
generation_config.json ADDED
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1
+ {
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+ "bos_token_id": 248044,
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+ "do_sample": true,
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+ "eos_token_id": [
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+ 248046,
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+ 248044
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+ ],
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+ "pad_token_id": 248044,
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+ "temperature": 1.0,
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+ "top_k": 20,
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+ "top_p": 0.95,
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+ "transformers_version": "5.5.0"
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+ }
merges.txt ADDED
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