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README.md
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Ensemble approach to predicting outcomes in lower grade glioma based on GSL gene expression and metabolic simulation
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Models trained on TCGA and CGGA LGG data (Initial models trained on TCGA and validated against CGGA).
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- `ANN_pipeline.pkl` — full sklearn Pipeline with skorch wrapper
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- `ANN_params.pt` — PyTorch weights for ANN (optional if pipeline already includes)
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- `ensemble/`:
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- `scaler.pkl` — StandardScaler used for ensemble logits
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- `beta_vec.npy` — Cox coefficients for ensemble
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- `ens_threshold.json` — tuned ensemble threshold
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- `thresholds/per_model_thresholds.json`
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---
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Ensemble approach to predicting outcomes in lower grade glioma based on GSL gene expression and metabolic simulation
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Models trained on TCGA and CGGA LGG data (Initial models trained on TCGA and validated against CGGA).
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Will update repo contents information.
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