wangzhonghua commited on
Commit
08d2938
·
1 Parent(s): 5b09132

download update

Browse files
Files changed (2) hide show
  1. README.md +73 -50
  2. config.json +8 -0
README.md CHANGED
@@ -1,50 +1,73 @@
1
- ---
2
- license: mit
3
- tags:
4
- - medical-imaging
5
- - segmentation
6
- - retinal
7
- - pytorch
8
- library_name: pytorch
9
- inference: true
10
- ---
11
-
12
- # RetSAM
13
-
14
- <p align="left">
15
- <a href="https://arxiv.org/abs/2602.07012"><img src="https://img.shields.io/badge/arXiv-PDF-red" alt="arXiv"></a>
16
- <a href="https://wzhjerry.github.io/RetSAM/"><img src="https://img.shields.io/badge/Project-Page-blue" alt="Project Page"></a>
17
- <a href="https://huggingface.co/JerryWzh/RetSAM_public"><img src="https://img.shields.io/badge/Model-RetSAM-green" alt="Model"></a>
18
- </p>
19
-
20
-
21
- Overview
22
- --------
23
- Official repository for "A General Model for Retinal Segmentation and Quantification".
24
-
25
- > **Note**: Publicly released models are trained on public datasets only and may differ from the paper-reported results.
26
-
27
- Checkpoint
28
- ----------
29
- - `--out_channels`: `"(2,3,2,4,6)"`.
30
- - `--patch_size`: `4`.
31
- - `--window_size`: `10`.
32
- - `--depths`: `"(2, 2, 18, 2)"`.
33
- - `--num_heads`: `"(4, 8, 16, 32)"`.
34
- - `--feature_size`: `128`.
35
- - `--size`: `640`.
36
-
37
- Citation
38
- --------
39
- ```bibtex
40
- @article{wang2026general,
41
- title={A General Model for Retinal Segmentation and Quantification},
42
- author={Wang, Zhonghua and Ju, Lie and Li, Sijia and Feng, Wei and Zhou, Sijin and Hu, Ming and Xiong, Jianhao and Tang, Xiaoying and Peng, Yifan and Lin, Mingquan and others},
43
- journal={arXiv preprint arXiv:2602.07012},
44
- year={2026}
45
- }
46
- ```
47
-
48
- Contact
49
- -------
50
- For questions or access to full RetSAM models, email: zhonghua.wang@monash.edu
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ---
2
+ license: mit
3
+ tags:
4
+ - medical-imaging
5
+ - segmentation
6
+ - retinal
7
+ - pytorch
8
+ library_name: pytorch
9
+ inference: true
10
+ ---
11
+
12
+ # RetSAM
13
+
14
+ <p align="left">
15
+ <a href="https://arxiv.org/abs/2602.07012"><img src="https://img.shields.io/badge/arXiv-PDF-red" alt="arXiv"></a>
16
+ <a href="https://wzhjerry.github.io/RetSAM/"><img src="https://img.shields.io/badge/Project-Page-blue" alt="Project Page"></a>
17
+ <a href="https://huggingface.co/JerryWzh/RetSAM_public"><img src="https://img.shields.io/badge/Model-RetSAM-green" alt="Model"></a>
18
+ </p>
19
+
20
+
21
+ Overview
22
+ --------
23
+ Official repository for "A General Model for Retinal Segmentation and Quantification".
24
+
25
+ > **Note**: Publicly released models are trained on public datasets only and may differ from the paper-reported results.
26
+
27
+ Checkpoint
28
+ ----------
29
+ - `--out_channels`: `"(2,3,2,4,6)"`.
30
+ - `--patch_size`: `4`.
31
+ - `--window_size`: `10`.
32
+ - `--depths`: `"(2, 2, 18, 2)"`.
33
+ - `--num_heads`: `"(4, 8, 16, 32)"`.
34
+ - `--feature_size`: `128`.
35
+ - `--size`: `640`.
36
+
37
+ Download from Hugging Face
38
+ --------------------------
39
+ Install `huggingface_hub`:
40
+ ```bash
41
+ pip install -U huggingface_hub
42
+ ```
43
+
44
+ Download the checkpoint with Python:
45
+ ```python
46
+ from huggingface_hub import hf_hub_download
47
+
48
+ ckpt_path = hf_hub_download(
49
+ repo_id="JerryWzh/RetSAM_public",
50
+ filename="retsam_v1_for_public.ckpt",
51
+ )
52
+ print(ckpt_path)
53
+ ```
54
+
55
+ Or download with CLI:
56
+ ```bash
57
+ hf download JerryWzh/RetSAM_public retsam_v1_for_public.ckpt
58
+ ```
59
+
60
+ Citation
61
+ --------
62
+ ```bibtex
63
+ @article{wang2026general,
64
+ title={A General Model for Retinal Segmentation and Quantification},
65
+ author={Wang, Zhonghua and Ju, Lie and Li, Sijia and Feng, Wei and Zhou, Sijin and Hu, Ming and Xiong, Jianhao and Tang, Xiaoying and Peng, Yifan and Lin, Mingquan and others},
66
+ journal={arXiv preprint arXiv:2602.07012},
67
+ year={2026}
68
+ }
69
+ ```
70
+
71
+ Contact
72
+ -------
73
+ For questions or access to full RetSAM models, please contact me at: zhonghua.wang@monash.edu
config.json ADDED
@@ -0,0 +1,8 @@
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "model_type": "retsam",
3
+ "architectures": [
4
+ "RetSAM"
5
+ ],
6
+ "framework": "pytorch",
7
+ "checkpoint_file": "retsam_v1_for_public.ckpt"
8
+ }