Text Generation
Transformers
TensorBoard
Safetensors
biology
genomics
rna
sequence-generation
regression
reinforcement-learning
git-lfs
Instructions to use JoyXiangLab/rnaseek-full with libraries, inference providers, notebooks, and local apps. Follow these links to get started.
- Libraries
- Transformers
How to use JoyXiangLab/rnaseek-full with Transformers:
# Use a pipeline as a high-level helper from transformers import pipeline pipe = pipeline("text-generation", model="JoyXiangLab/rnaseek-full")# Load model directly from transformers import AutoModel model = AutoModel.from_pretrained("JoyXiangLab/rnaseek-full", device_map="auto") - Notebooks
- Google Colab
- Kaggle
- Local Apps Settings
- vLLM
How to use JoyXiangLab/rnaseek-full with vLLM:
Install from pip and serve model
# Install vLLM from pip: pip install vllm # Start the vLLM server: vllm serve "JoyXiangLab/rnaseek-full" # Call the server using curl (OpenAI-compatible API): curl -X POST "http://localhost:8000/v1/completions" \ -H "Content-Type: application/json" \ --data '{ "model": "JoyXiangLab/rnaseek-full", "prompt": "Once upon a time,", "max_tokens": 512, "temperature": 0.5 }'Use Docker
docker model run hf.co/JoyXiangLab/rnaseek-full
- SGLang
How to use JoyXiangLab/rnaseek-full with SGLang:
Install from pip and serve model
# Install SGLang from pip: pip install sglang # Start the SGLang server: python3 -m sglang.launch_server \ --model-path "JoyXiangLab/rnaseek-full" \ --host 0.0.0.0 \ --port 30000 # Call the server using curl (OpenAI-compatible API): curl -X POST "http://localhost:30000/v1/completions" \ -H "Content-Type: application/json" \ --data '{ "model": "JoyXiangLab/rnaseek-full", "prompt": "Once upon a time,", "max_tokens": 512, "temperature": 0.5 }'Use Docker images
docker run --gpus all \ --shm-size 32g \ -p 30000:30000 \ -v ~/.cache/huggingface:/root/.cache/huggingface \ --env "HF_TOKEN=<secret>" \ --ipc=host \ lmsysorg/sglang:latest \ python3 -m sglang.launch_server \ --model-path "JoyXiangLab/rnaseek-full" \ --host 0.0.0.0 \ --port 30000 # Call the server using curl (OpenAI-compatible API): curl -X POST "http://localhost:30000/v1/completions" \ -H "Content-Type: application/json" \ --data '{ "model": "JoyXiangLab/rnaseek-full", "prompt": "Once upon a time,", "max_tokens": 512, "temperature": 0.5 }' - Docker Model Runner
How to use JoyXiangLab/rnaseek-full with Docker Model Runner:
docker model run hf.co/JoyXiangLab/rnaseek-full
| import sys, os | |
| sys.path.append(os.path.dirname(os.path.dirname(os.path.abspath(__file__)))) | |
| from exllamav2 import ExLlamaV2, ExLlamaV2Config, ExLlamaV2Cache, ExLlamaV2Tokenizer, Timer | |
| from exllamav2.generator import ExLlamaV2DynamicGenerator | |
| model_dir = "/mnt/str/models/mistral-7b-exl2/4.0bpw" | |
| config = ExLlamaV2Config(model_dir) | |
| config.arch_compat_overrides() | |
| model = ExLlamaV2(config) | |
| cache = ExLlamaV2Cache(model, max_seq_len = 32768, lazy = True) | |
| model.load_autosplit(cache, progress = True) | |
| print("Loading tokenizer...") | |
| tokenizer = ExLlamaV2Tokenizer(config) | |
| # Initialize the generator with all default parameters | |
| generator = ExLlamaV2DynamicGenerator( | |
| model = model, | |
| cache = cache, | |
| tokenizer = tokenizer, | |
| ) | |
| max_new_tokens = 250 | |
| # Warmup generator. The function runs a small completion job to allow all the kernels to fully initialize and | |
| # autotune before we do any timing measurements. It can be a little slow for larger models and is not needed | |
| # to produce correct output. | |
| generator.warmup() | |
| # Generate one completion, using default settings | |
| prompt = "Once upon a time," | |
| with Timer() as t_single: | |
| output = generator.generate(prompt = prompt, max_new_tokens = max_new_tokens, add_bos = True) | |
| print("-----------------------------------------------------------------------------------") | |
| print("- Single completion") | |
| print("-----------------------------------------------------------------------------------") | |
| print(output) | |
| print() | |
| # Do a batched generation | |
| prompts = [ | |
| "Once upon a time,", | |
| "The secret to success is", | |
| "There's no such thing as", | |
| "Here's why you should adopt a cat:", | |
| ] | |
| with Timer() as t_batched: | |
| outputs = generator.generate(prompt = prompts, max_new_tokens = max_new_tokens, add_bos = True) | |
| for idx, output in enumerate(outputs): | |
| print("-----------------------------------------------------------------------------------") | |
| print(f"- Batched completion #{idx + 1}") | |
| print("-----------------------------------------------------------------------------------") | |
| print(output) | |
| print() | |
| print("-----------------------------------------------------------------------------------") | |
| print(f"speed, bsz 1: {max_new_tokens / t_single.interval:.2f} tokens/second") | |
| print(f"speed, bsz {len(prompts)}: {max_new_tokens * len(prompts) / t_batched.interval:.2f} tokens/second") | |