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Initial config export (README, examples) (#1)
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{
"_serializing": true,
"activation_recompute": false,
"adapter_config": null,
"adapter_type": null,
"allow_tf32": false,
"anatomical_regions": [
"head"
],
"attention_impl": null,
"batch_size": 16,
"cache_ttl": 3600,
"classification_labels": [
"diagnosis",
"treatment",
"follow-up"
],
"config_version": "1.0.0",
"cudnn_benchmark": null,
"document_types": [
"clinical_note",
"discharge_summary",
"radiology_report"
],
"domain_adaptation": false,
"domain_adaptation_lambda": 0.1,
"domain_specific_vocab": null,
"emit_trace": false,
"enable_flash_attention": null,
"enable_memory_pooling": false,
"enable_mixed_precision": false,
"enable_profiling": false,
"enable_uncertainty_estimation": false,
"enforce_eager": false,
"entity_linking": {
"confidence_threshold": 0.8,
"enabled": false,
"knowledge_bases": [
"umls",
"snomed_ct",
"loinc"
]
},
"eos": -1,
"file_path": null,
"flash_attention_config": null,
"gpu_memory_utilization": 0.9,
"grad_checkpointing": false,
"hf_config": "namespace(model_type='unknown', max_position_embeddings=4096)",
"imaging_modalities": [
"xray"
],
"kvcache_block_size": 256,
"max_entity_span_length": 10,
"max_medical_seq_length": 4096,
"max_model_len": 4096,
"max_num_batched_tokens": 32768,
"max_num_seqs": 512,
"max_retries": 3,
"medical_entity_types": [
"disease"
],
"medical_specialties": [
"cardiology"
],
"memory_efficient": true,
"mixed_precision_dtype": "fp16",
"model": "emilyalsentzer/Bio_ClinicalBERT",
"model_type": "medical_llm",
"ner_confidence_threshold": 0.5,
"num_kvcache_blocks": -1,
"pool_device": "auto",
"pool_max_bytes": null,
"pretrained_model_name_or_path": "emilyalsentzer/Bio_ClinicalBERT",
"profiler_device": "auto",
"quantization_bits": null,
"quantization_method": null,
"recompute_granularity": null,
"regulatory_compliance": [
"hipaa",
"gdpr"
],
"request_timeout": 30,
"section_headers": [
"history_of_present_illness",
"past_medical_history",
"medications",
"allergies",
"family_history",
"social_history",
"review_of_systems",
"physical_exam",
"assessment_and_plan"
],
"task_type": "classification",
"tensor_parallel_size": 1,
"torch_matmul_precision": null,
"trace_dir": "profiles",
"uncertainty_threshold": 0.7,
"use_cuda_graphs": false,
"use_medical_adapter": true,
"version": "0.1.0"
}