Sample Dataset
Browse files- Sample Dataset +158 -0
Sample Dataset
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| 1 |
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from pathlib import Path
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# Re-define and save the notebook after kernel reset
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notebook_code = '''
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{
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"cells": [
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{
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"cell_type": "markdown",
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| 9 |
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"metadata": {},
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| 10 |
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"source": [
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| 11 |
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"# 🧠 MedicalChatBot Training Hub (Google Colab T4)\n",
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| 12 |
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"\n",
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| 13 |
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"Fine-tune your MedicalChatBot using LoRA + Hugging Face on a T4 GPU."
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {},
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"outputs": [],
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| 21 |
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"source": [
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| 22 |
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"# ✅ Install required libraries\n",
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"!pip install -q transformers datasets peft accelerate evaluate bitsandbytes"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {},
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"outputs": [],
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"source": [
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"# ✅ Login to Hugging Face\n",
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"from huggingface_hub import notebook_login\n",
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"notebook_login()"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"metadata": {},
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| 41 |
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"outputs": [],
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| 42 |
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"source": [
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"# ✅ Load dataset (MedQuAD or PubMedQA)\n",
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"from datasets import load_dataset\n",
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"\n",
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"# Use medquad or pubmed_qa\n",
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| 47 |
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"dataset = load_dataset('medquad')\n",
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| 48 |
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"dataset = dataset['train'].train_test_split(test_size=0.1)"
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]
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| 50 |
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},
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| 51 |
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{
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| 52 |
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"cell_type": "code",
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| 53 |
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"execution_count": null,
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| 54 |
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"metadata": {},
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| 55 |
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"outputs": [],
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| 56 |
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"source": [
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| 57 |
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"# ✅ Load tokenizer & model (e.g., Mistral 7B or base model)\n",
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| 58 |
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"from transformers import AutoModelForCausalLM, AutoTokenizer\n",
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| 59 |
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"\n",
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| 60 |
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"base_model = 'mistralai/Mistral-7B-v0.1' # change if needed\n",
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"tokenizer = AutoTokenizer.from_pretrained(base_model)\n",
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"model = AutoModelForCausalLM.from_pretrained(base_model, device_map='auto', load_in_4bit=True)"
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]
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},
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| 65 |
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{
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"cell_type": "code",
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| 67 |
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"execution_count": null,
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| 68 |
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"metadata": {},
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| 69 |
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"outputs": [],
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| 70 |
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"source": [
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"# ✅ Apply LoRA with PEFT\n",
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"from peft import get_peft_model, LoraConfig, TaskType\n",
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"\n",
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"peft_config = LoraConfig(\n",
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" task_type=TaskType.CAUSAL_LM,\n",
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" inference_mode=False,\n",
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" r=8,\n",
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" lora_alpha=16,\n",
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" lora_dropout=0.1\n",
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")\n",
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| 81 |
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"model = get_peft_model(model, peft_config)"
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]
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},
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{
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"cell_type": "code",
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| 86 |
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"execution_count": null,
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| 87 |
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"metadata": {},
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| 88 |
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"outputs": [],
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| 89 |
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"source": [
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| 90 |
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"# ✅ Tokenize dataset\n",
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"def tokenize(example):\n",
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| 92 |
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" return tokenizer(example['question'] + ' ' + example['answer'], truncation=True)\n",
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"\n",
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| 94 |
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"tokenized = dataset.map(tokenize, batched=True)"
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]
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},
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{
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"cell_type": "code",
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"execution_count": null,
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| 100 |
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"metadata": {},
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| 101 |
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"outputs": [],
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"source": [
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"# ✅ Train with Trainer\n",
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"from transformers import TrainingArguments, Trainer\n",
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"\n",
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"args = TrainingArguments(\n",
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| 107 |
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" output_dir='./results',\n",
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| 108 |
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" per_device_train_batch_size=2,\n",
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| 109 |
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" per_device_eval_batch_size=2,\n",
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| 110 |
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" num_train_epochs=2,\n",
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| 111 |
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" logging_steps=10,\n",
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| 112 |
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" evaluation_strategy='epoch',\n",
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| 113 |
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" save_strategy='epoch',\n",
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| 114 |
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" fp16=True\n",
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")\n",
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"\n",
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| 117 |
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"trainer = Trainer(\n",
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| 118 |
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" model=model,\n",
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| 119 |
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" args=args,\n",
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| 120 |
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" train_dataset=tokenized['train'],\n",
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| 121 |
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" eval_dataset=tokenized['test']\n",
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")\n",
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"trainer.train()"
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]
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},
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| 126 |
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{
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| 127 |
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"cell_type": "code",
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| 128 |
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"execution_count": null,
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| 129 |
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"metadata": {},
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| 130 |
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"outputs": [],
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| 131 |
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"source": [
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| 132 |
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"# ✅ Save and push model to Hugging Face Hub\n",
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| 133 |
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"model.push_to_hub('kberta2014/MedicalChatBot-Lora')\n",
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| 134 |
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"tokenizer.push_to_hub('kberta2014/MedicalChatBot-Lora')"
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]
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}
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],
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| 138 |
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"metadata": {
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| 139 |
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"kernelspec": {
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| 140 |
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"display_name": "Python 3",
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| 141 |
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"language": "python",
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| 142 |
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"name": "python3"
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| 143 |
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},
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| 144 |
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"language_info": {
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| 145 |
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"name": "python",
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| 146 |
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"version": "3.9"
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| 147 |
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}
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},
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"nbformat": 4,
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"nbformat_minor": 0
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}
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'''
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# Save to notebook file
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notebook_path = Path("/mnt/data/MedicalChatBot_TrainingHub_Colab_T4.ipynb")
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| 156 |
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notebook_path.write_text(notebook_code)
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| 157 |
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| 158 |
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notebook_path.name
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