File size: 42,297 Bytes
a07ef96 |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 667 668 669 670 671 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687 688 689 690 691 692 693 694 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 715 716 717 718 719 720 721 722 723 724 725 726 727 728 729 730 731 732 733 734 735 736 737 738 739 740 741 742 743 744 745 746 747 748 749 750 751 752 753 754 755 756 757 758 759 760 761 762 763 764 765 766 767 768 769 770 771 772 773 774 775 776 777 778 779 780 781 782 783 784 785 786 787 788 789 790 791 792 793 794 795 796 797 798 799 800 801 802 803 804 805 806 807 808 809 810 811 812 813 814 815 816 817 818 819 820 821 822 823 824 825 826 827 828 829 830 831 832 833 834 835 836 837 838 839 840 841 842 843 844 845 846 847 848 849 850 851 852 853 854 855 856 857 858 859 860 861 862 863 864 865 866 867 868 869 870 871 872 873 874 875 876 877 878 879 880 881 882 883 884 885 886 887 888 889 890 891 892 893 894 895 896 897 898 899 900 901 902 903 904 905 906 907 908 909 910 911 912 913 914 915 916 917 918 919 920 921 922 923 924 925 926 927 928 929 930 931 932 933 934 935 936 937 938 939 940 941 942 943 944 945 946 947 948 949 950 951 952 953 954 955 956 957 958 959 960 961 962 963 964 965 966 967 968 969 970 971 972 973 974 975 976 977 978 979 980 981 982 983 984 985 986 987 988 989 990 991 992 993 994 995 996 997 998 999 1000 1001 1002 1003 1004 1005 1006 1007 1008 1009 1010 1011 1012 1013 1014 1015 1016 1017 1018 1019 1020 1021 1022 1023 1024 1025 1026 1027 1028 1029 1030 1031 1032 1033 1034 1035 1036 1037 1038 1039 1040 1041 1042 1043 1044 1045 1046 1047 1048 1049 1050 1051 1052 1053 1054 1055 1056 1057 1058 1059 1060 1061 1062 1063 1064 1065 1066 1067 1068 1069 1070 1071 1072 1073 1074 1075 1076 1077 1078 1079 1080 1081 1082 1083 1084 1085 1086 1087 1088 1089 1090 1091 1092 1093 1094 1095 1096 1097 1098 1099 1100 1101 1102 1103 1104 1105 1106 1107 1108 1109 1110 1111 1112 1113 1114 1115 1116 1117 1118 1119 1120 1121 1122 1123 1124 1125 1126 1127 1128 1129 1130 1131 1132 1133 1134 1135 1136 1137 1138 1139 1140 1141 1142 1143 1144 1145 1146 1147 1148 1149 1150 1151 1152 1153 1154 1155 1156 1157 1158 1159 1160 1161 1162 1163 1164 1165 1166 1167 1168 1169 1170 1171 1172 1173 1174 1175 1176 1177 1178 1179 1180 1181 1182 1183 |
# -*- coding: utf-8 -*-
"""2.2.2.2.2.ipynb
Automatically generated by Colab.
Original file is located at
https://colab.research.google.com/drive/1igY4MKIJJTPHgEkdLFI_T5H6sLUoTaLr
"""
#heat map video and metrics
"""## CODE"""
pip install torchmetrics lpips
import torch
import torch.nn as nn
import torch.nn.functional as F
from torch.utils.data import Dataset, DataLoader
from torchvision import transforms
from pathlib import Path
from PIL import Image
import numpy as np
import matplotlib.pyplot as plt
from torchmetrics.image import PeakSignalNoiseRatio, StructuralSimilarityIndexMeasure
from torchmetrics.image.fid import FrechetInceptionDistance
import lpips
import os
import random
import shutil
from huggingface_hub import HfApi, hf_hub_download
import tarfile
import json
import cv2
from tqdm import tqdm
def download_sequential_data(repo_id="Amar-S/MOVi-MC-AC", sample_ratio=0.01, base_dir="/content/data"):
"""
Download data while preserving video sequences
"""
api = HfApi()
# Create directories
os.makedirs(f"{base_dir}/train", exist_ok=True)
os.makedirs(f"{base_dir}/test", exist_ok=True)
# List all files in the repo
files = api.list_repo_files(repo_id=repo_id, repo_type="dataset")
# Separate train and test archives (each archive contains a complete scene sequence)
#train_files = [f for f in files if f.startswith("train/") and f.endswith(".tar.gz")]
test_files = [f for f in files if f.startswith("test/") and f.endswith(".tar.gz")]
#print(f"Found {len(train_files)} train archives and {len(test_files)} test archives.")
# Sample complete archives (not individual files) to preserve sequences
#subset_train = random.sample(train_files, max(1, int(len(train_files) * sample_ratio)))
subset_test = random.sample(test_files, max(1, int(len(test_files) * sample_ratio)))
#print(f"Downloading {len(subset_train)} train archives and {len(subset_test)} test archives...")
# Download training archives
# for file in subset_train:
# print(f"Downloading {file}...")
# out_path = hf_hub_download(repo_id=repo_id, repo_type="dataset", filename=file)
# dest_path = f"{base_dir}/train/{os.path.basename(file)}"
# shutil.copyfile(out_path, dest_path)
# Download test archives
for file in subset_test:
print(f"Downloading {file}...")
out_path = hf_hub_download(repo_id=repo_id, repo_type="dataset", filename=file)
dest_path = f"{base_dir}/test/{os.path.basename(file)}"
shutil.copyfile(out_path, dest_path)
# Extract all archives
extract_archives(f"{base_dir}/train")
extract_archives(f"{base_dir}/test")
print("Download and extraction complete!")
def extract_archives(directory):
"""Extract all tar.gz files in a directory"""
for file in os.listdir(directory):
if file.endswith(".tar.gz"):
filepath = os.path.join(directory, file)
print(f"Extracting {filepath}...")
with tarfile.open(filepath, 'r:gz') as tar:
tar.extractall(path=directory)
# Remove the archive after extraction
os.remove(filepath)
download_sequential_data()
#extract_archives('/content/data/train')
extract_archives('/content/data/test')
def extract_archives(directory):
"""Extract all tar.gz files in a directory"""
for file in os.listdir(directory):
if file.endswith(".tar.gz"):
filepath = os.path.join(directory, file)
print(f"Extracting {filepath}...")
with tarfile.open(filepath, 'r:gz') as tar:
print(filepath)
tar.extractall(path=directory)
# Remove the archive after extraction
os.remove(filepath)
#extract_archives('/content/data/train')
extract_archives('/content/data/test')
class VideoAmodalDataset(Dataset):
def __init__(self, root_dir, split='train', seq_len=8, img_size=(256,256),
max_scenes=4, samples_per_scene=3, max_samples=None):
self.root_dir = Path(root_dir)
self.split = split
self.seq_len = seq_len
self.img_size = img_size
self.max_scenes = max_scenes
self.samples_per_scene = samples_per_scene
self.samples = self._build_sample_index(max_samples)
self.transform = transforms.Compose([
transforms.Resize(img_size),
transforms.ToTensor(),
])
def _build_sample_index(self, max_samples):
samples = []
scene_paths = sorted((self.root_dir / self.split).glob('scene_*'))[:self.max_scenes]
for scene_path in scene_paths:
camera_paths = sorted(scene_path.glob('camera_*'))
for camera_path in camera_paths:
obj_paths = sorted(camera_path.glob('obj_*'))
selected_objs = random.sample(obj_paths, min(self.samples_per_scene, len(obj_paths)))
for obj_path in selected_objs:
rgba_files = sorted(camera_path.glob('rgba_*.png'))
frame_ids = [int(p.stem.split('_')[1]) for p in rgba_files]
# Create non-overlapping sequences
for i in range(0, len(frame_ids) - self.seq_len + 1, self.seq_len):
samples.append({
'scene': scene_path.name,
'camera': camera_path.name,
'obj_folder': obj_path.name,
'frame_ids': frame_ids[i:i+self.seq_len],
'obj_id': int(obj_path.name.split('_')[1])
})
if max_samples and len(samples) >= max_samples:
return samples
return samples
def __getitem__(self, idx):
sample = self.samples[idx]
base_path = self.root_dir / self.split / sample['scene'] / sample['camera']
obj_path = base_path / sample['obj_folder']
rgb_frames = []
modal_mask_frames = []
amodal_mask_frames = []
amodal_rgb_frames = []
for fid in sample['frame_ids']:
fid_str = f"{fid:05d}"
try:
# Load scene RGB
rgb = Image.open(base_path / f'rgba_{fid_str}.png').convert('RGB')
rgb = self.transform(rgb)
# Load scene segmentation to compute modal mask
seg_map = np.array(Image.open(base_path / f'segmentation_{fid_str}.png'))
modal_mask_np = (seg_map == sample['obj_id']).astype(np.uint8) * 255
modal_mask = Image.fromarray(modal_mask_np, mode='L')
modal_mask = self.transform(modal_mask)
# Load amodal mask
amodal_mask = Image.open(obj_path / f'segmentation_{fid_str}.png').convert('L')
amodal_mask = self.transform(amodal_mask)
# Load target amodal RGB
amodal_rgb = Image.open(obj_path / f'rgba_{fid_str}.png').convert('RGB')
amodal_rgb = self.transform(amodal_rgb)
rgb_frames.append(rgb)
modal_mask_frames.append(modal_mask)
amodal_mask_frames.append(amodal_mask)
amodal_rgb_frames.append(amodal_rgb)
except Exception as e:
print(f"Error loading {base_path}/rgba_{fid_str}.png: {e}")
# Return empty tensors if loading fails
empty_rgb = torch.zeros(3, self.img_size[0], self.img_size[1])
empty_mask = torch.zeros(1, self.img_size[0], self.img_size[1])
return {
'rgb_sequence': empty_rgb.unsqueeze(0).repeat(self.seq_len, 1, 1, 1),
'modal_masks': empty_mask.unsqueeze(0).repeat(self.seq_len, 1, 1, 1),
'amodal_masks': empty_mask.unsqueeze(0).repeat(self.seq_len, 1, 1, 1),
'amodal_rgb_sequence': empty_rgb.unsqueeze(0).repeat(self.seq_len, 1, 1, 1),
'scene': sample['scene'],
'camera': sample['camera'],
'object_id': sample['obj_id']
}
return {
'rgb_sequence': torch.stack(rgb_frames), # Scene RGB
'modal_masks': torch.stack(modal_mask_frames), # Modal masks (visible parts)
'amodal_masks': torch.stack(amodal_mask_frames), # Amodal masks (complete shape)
'amodal_rgb_sequence': torch.stack(amodal_rgb_frames), # Target: complete object RGB
'scene': sample['scene'],
'camera': sample['camera'],
'object_id': sample['obj_id']
}
def __len__(self):
return len(self.samples)
import wandb
wandb.login()
# Add these imports to your existing imports
import numpy as np
from skimage.metrics import structural_similarity as ssim
from skimage.metrics import peak_signal_noise_ratio as psnr
import torch.nn.functional as F
from scipy import linalg
import matplotlib.pyplot as plt
import matplotlib.cm as cm
from torchvision.models import inception_v3
from torchvision.transforms import Resize, Normalize
import lpips
# Add this class for computing metrics
class VideoAmodalMetrics:
"""Compute various metrics for video amodal completion"""
def __init__(self, device='cuda'):
self.device = device
# Initialize LPIPS model
self.lpips_model = lpips.LPIPS(net='alex').to(device)
# Initialize Inception model for FID
self.inception_model = inception_v3(pretrained=True, transform_input=False).to(device)
self.inception_model.eval()
# Preprocessing for Inception
self.inception_transform = torch.nn.Sequential(
Resize((299, 299)),
Normalize(mean=[0.485, 0.456, 0.406], std=[0.229, 0.224, 0.225])
)
def calculate_psnr(self, pred, target, mask=None):
"""Calculate PSNR between prediction and target"""
if mask is not None:
# Only calculate PSNR in masked regions
pred_masked = pred * mask
target_masked = target * mask
# Convert to numpy and calculate PSNR for each frame
psnr_values = []
for i in range(pred.shape[0]): # Over batch or sequence
if pred.dim() == 5: # (B, C, N, H, W)
for j in range(pred.shape[2]): # Over frames
p = pred_masked[i, :, j].permute(1, 2, 0).cpu().numpy()
t = target_masked[i, :, j].permute(1, 2, 0).cpu().numpy()
m = mask[i, 0, j].cpu().numpy()
if m.sum() > 0: # Only if there are masked pixels
psnr_val = psnr(t, p, data_range=1.0)
psnr_values.append(psnr_val)
else: # (B, C, H, W)
p = pred_masked[i].permute(1, 2, 0).cpu().numpy()
t = target_masked[i].permute(1, 2, 0).cpu().numpy()
m = mask[i, 0].cpu().numpy()
if m.sum() > 0:
psnr_val = psnr(t, p, data_range=1.0)
psnr_values.append(psnr_val)
else:
# Calculate PSNR for entire image
mse = F.mse_loss(pred, target)
psnr_val = 20 * torch.log10(1.0 / torch.sqrt(mse))
return psnr_val.item()
return np.mean(psnr_values) if psnr_values else 0.0
def calculate_ssim(self, pred, target, mask=None):
"""Calculate SSIM between prediction and target"""
ssim_values = []
for i in range(pred.shape[0]): # Over batch
if pred.dim() == 5: # (B, C, N, H, W)
for j in range(pred.shape[2]): # Over frames
p = pred[i, :, j].permute(1, 2, 0).cpu().numpy()
t = target[i, :, j].permute(1, 2, 0).cpu().numpy()
if mask is not None:
m = mask[i, 0, j].cpu().numpy()
if m.sum() == 0:
continue
ssim_val = ssim(t, p, data_range=1.0, channel_axis=2)
ssim_values.append(ssim_val)
else: # (B, C, H, W)
p = pred[i].permute(1, 2, 0).cpu().numpy()
t = target[i].permute(1, 2, 0).cpu().numpy()
if mask is not None:
m = mask[i, 0].cpu().numpy()
if m.sum() == 0:
continue
ssim_val = ssim(t, p, data_range=1.0, channel_axis=2)
ssim_values.append(ssim_val)
return np.mean(ssim_values) if ssim_values else 0.0
def calculate_lpips(self, pred, target, mask=None):
"""Calculate LPIPS perceptual distance"""
# Ensure inputs are in [-1, 1] range for LPIPS
pred_norm = pred * 2.0 - 1.0
target_norm = target * 2.0 - 1.0
lpips_values = []
if pred.dim() == 5: # (B, C, N, H, W)
for i in range(pred.shape[0]):
for j in range(pred.shape[2]):
p = pred_norm[i, :, j].unsqueeze(0)
t = target_norm[i, :, j].unsqueeze(0)
with torch.no_grad():
lpips_val = self.lpips_model(p, t)
lpips_values.append(lpips_val.item())
else: # (B, C, H, W)
with torch.no_grad():
lpips_val = self.lpips_model(pred_norm, target_norm)
lpips_values.extend(lpips_val.cpu().numpy().tolist())
return np.mean(lpips_values) if lpips_values else 0.0
def calculate_iou(self, pred_mask, target_mask, threshold=0.5):
"""Calculate IoU for binary masks"""
pred_binary = (pred_mask > threshold).float()
target_binary = (target_mask > threshold).float()
intersection = (pred_binary * target_binary).sum()
union = pred_binary.sum() + target_binary.sum() - intersection
iou = intersection / (union + 1e-8)
return iou.item()
def get_inception_features(self, images):
"""Extract features from Inception model for FID calculation"""
with torch.no_grad():
# Preprocess images
images_preprocessed = self.inception_transform(images)
# Get features
features = self.inception_model(images_preprocessed)
return features.cpu().numpy()
def calculate_fid(self, pred, target):
"""Calculate Fréchet Inception Distance"""
# Reshape if needed
if pred.dim() == 5: # (B, C, N, H, W) -> (B*N, C, H, W)
pred = pred.permute(0, 2, 1, 3, 4).reshape(-1, pred.shape[1], pred.shape[3], pred.shape[4])
target = target.permute(0, 2, 1, 3, 4).reshape(-1, target.shape[1], target.shape[3], target.shape[4])
# Get features
pred_features = self.get_inception_features(pred)
target_features = self.get_inception_features(target)
# Calculate statistics
mu1, sigma1 = pred_features.mean(axis=0), np.cov(pred_features, rowvar=False)
mu2, sigma2 = target_features.mean(axis=0), np.cov(target_features, rowvar=False)
# Calculate FID
diff = mu1 - mu2
covmean, _ = linalg.sqrtm(sigma1.dot(sigma2), disp=False)
if np.iscomplexobj(covmean):
covmean = covmean.real
fid = diff.dot(diff) + np.trace(sigma1 + sigma2 - 2 * covmean)
return fid
def calculate_all_metrics(self, pred, target, amodal_mask=None):
"""Calculate all metrics at once"""
metrics = {}
metrics['psnr'] = self.calculate_psnr(pred, target, amodal_mask)
metrics['ssim'] = self.calculate_ssim(pred, target, amodal_mask)
metrics['lpips'] = self.calculate_lpips(pred, target, amodal_mask)
try:
metrics['fid'] = self.calculate_fid(pred, target)
except:
metrics['fid'] = 0.0
# IoU for masks (if available)
if amodal_mask is not None:
# Create predicted mask by thresholding prediction
pred_intensity = pred.mean(dim=1, keepdim=True) # Convert to grayscale
metrics['iou'] = self.calculate_iou(pred_intensity, amodal_mask)
return metrics
# Add this function to create error heatmaps
def create_error_heatmap(pred, target, mask=None):
"""Create error heatmap between prediction and target"""
# Calculate per-pixel error
error = torch.abs(pred - target).mean(dim=0) # Average over color channels
if mask is not None:
error = error * mask.squeeze()
return error.cpu().numpy()
# Enhanced training function with metrics and wandb
def train_video_amodal_with_metrics():
# Initialize wandb
wandb.init(
project="video-amodal-completion",
config={
'batch_size': 2,
'seq_len': 6,
'img_size': (256, 256),
'num_epochs': 30,
'learning_rate': 5e-5,
'max_scenes': 2,
'samples_per_scene': 2,
'num_workers': 2,
'grad_accum_steps': 4
}
)
#print(f"Loaded model from epoch {checkpoint['epoch']} with loss {checkpoint['train_loss']:.4f}")
device = torch.device('cuda' if torch.cuda.is_available() else 'cpu')
torch.cuda.empty_cache()
config = wandb.config
# Initialize metrics calculator
metrics_calculator = VideoAmodalMetrics(device)
# Create datasets (your existing code)
train_dataset = VideoAmodalDataset(
root_dir='data',
split='train',
seq_len=config.seq_len,
img_size=config.img_size,
max_scenes=config.max_scenes,
samples_per_scene=config.samples_per_scene,
max_samples=100
)
val_dataset = VideoAmodalDataset(
root_dir='data',
split='test',
seq_len=config.seq_len,
img_size=config.img_size,
max_scenes=1,
samples_per_scene=1,
max_samples=10
)
# DataLoaders (your existing code)
train_loader = DataLoader(
train_dataset,
batch_size=config.batch_size,
shuffle=True,
num_workers=config.num_workers,
pin_memory=True
)
val_loader = DataLoader(
val_dataset,
batch_size=1,
shuffle=False,
num_workers=1
)
# Model (your existing code)
model = Video3DUNet(
in_channels=5,
out_channels=3,
sequence_length=config.seq_len
).to(device)
optimizer = torch.optim.AdamW(model.parameters(), lr=config.learning_rate, weight_decay=1e-4)
criterion = VideoAmodalCompletionLoss()
# Training loop with metrics
for epoch in range(config.num_epochs):
model.train()
epoch_losses = []
epoch_metrics = {
'train_psnr': [],
'train_ssim': [],
'train_lpips': [],
'train_fid': [],
'train_iou': []
}
for i, batch in enumerate(tqdm(train_loader, desc=f"Epoch {epoch+1}")):
# Prepare inputs and targets (your existing code)
inputs = prepare_model_input(batch).to(device, non_blocking=True)
targets = prepare_model_target(batch).to(device, non_blocking=True)
modal_masks = batch['modal_masks'].to(device, non_blocking=True)
amodal_masks = batch['amodal_masks'].to(device, non_blocking=True)
# Forward pass (your existing code)
with torch.cuda.amp.autocast():
outputs = model(inputs)
loss, loss_dict = criterion(outputs, targets, modal_masks, amodal_masks)
loss = loss / config.grad_accum_steps
# Backward pass (your existing code)
loss.backward()
# Calculate metrics periodically
if i % 10 == 0:
with torch.no_grad():
amodal_masks_3d = amodal_masks.permute(0, 2, 1, 3, 4)
batch_metrics = metrics_calculator.calculate_all_metrics(
outputs, targets, amodal_masks_3d
)
for key, value in batch_metrics.items():
if f'train_{key}' in epoch_metrics:
epoch_metrics[f'train_{key}'].append(value)
# Gradient accumulation (your existing code)
if (i + 1) % config.grad_accum_steps == 0:
torch.nn.utils.clip_grad_norm_(model.parameters(), 1.0)
optimizer.step()
optimizer.zero_grad()
torch.cuda.empty_cache()
epoch_losses.append(loss_dict['total_loss'])
# Periodic logging with wandb
if i % 20 == 0:
log_dict = {
'batch': epoch * len(train_loader) + i,
'train_loss': loss_dict['total_loss'],
'train_visible_loss': loss_dict['visible_loss'],
'train_occluded_loss': loss_dict['occluded_loss'],
'train_background_loss': loss_dict['background_loss'],
'train_boundary_loss': loss_dict['boundary_loss']
}
# Add latest metrics if available
for key, values in epoch_metrics.items():
if values:
log_dict[key] = values[-1]
wandb.log(log_dict)
print(f"Batch {i}, Loss: {loss_dict['total_loss']:.4f}")
print(f" Visible: {loss_dict['visible_loss']:.4f}, "
f"Occluded: {loss_dict['occluded_loss']:.4f}, "
f"Background: {loss_dict['background_loss']:.4f}")
# Validation with metrics
model.eval()
val_losses = []
val_metrics = {
'val_psnr': [],
'val_ssim': [],
'val_lpips': [],
'val_fid': [],
'val_iou': []
}
with torch.no_grad():
for batch in val_loader:
inputs = prepare_model_input(batch).to(device)
targets = prepare_model_target(batch).to(device)
modal_masks = batch['modal_masks'].to(device)
amodal_masks = batch['amodal_masks'].to(device)
outputs = model(inputs)
loss, loss_dict = criterion(outputs, targets, modal_masks, amodal_masks)
val_losses.append(loss_dict['total_loss'])
# Calculate validation metrics
amodal_masks_3d = amodal_masks.permute(0, 2, 1, 3, 4)
batch_metrics = metrics_calculator.calculate_all_metrics(
outputs, targets, amodal_masks_3d
)
for key, value in batch_metrics.items():
if f'val_{key}' in val_metrics:
val_metrics[f'val_{key}'].append(value)
# End of epoch logging
avg_train_loss = np.mean(epoch_losses)
avg_val_loss = np.mean(val_losses)
epoch_log = {
'epoch': epoch,
'avg_train_loss': avg_train_loss,
'avg_val_loss': avg_val_loss
}
# Add averaged metrics
for key, values in {**epoch_metrics, **val_metrics}.items():
if values:
epoch_log[f'avg_{key}'] = np.mean(values)
wandb.log(epoch_log)
print(f"Epoch {epoch+1} - Train Loss: {avg_train_loss:.4f}, Val Loss: {avg_val_loss:.4f}")
# Log metrics
for key, values in val_metrics.items():
if values:
print(f" {key}: {np.mean(values):.4f}")
# Save checkpoint (your existing code)
torch.save({
'epoch': epoch,
'model_state_dict': model.state_dict(),
'optimizer_state_dict': optimizer.state_dict(),
'train_loss': avg_train_loss,
'val_loss': avg_val_loss,
'metrics': {key: np.mean(values) for key, values in val_metrics.items() if values}
}, f"epoch_{epoch}.pth")
wandb.finish()
# Enhanced GIF creation with error heatmap
def create_gif_with_error_heatmap(predictions, rgb_frames, gt_amodal_frames, amodal_masks,
output_path="amodal_completion_with_error.gif", duration=200):
"""Create animated GIF with error heatmap"""
from PIL import Image
import numpy as np
frames = []
all_errors = []
# Calculate errors for all frames first to get consistent color scale
for i in range(len(predictions)):
pred_tensor = predictions[i]
gt_tensor = gt_amodal_frames[i]
mask_tensor = amodal_masks[i] if amodal_masks else None
error = create_error_heatmap(pred_tensor.unsqueeze(0), gt_tensor.unsqueeze(0),
mask_tensor.unsqueeze(0) if mask_tensor is not None else None)
all_errors.append(error)
# Get global error range for consistent coloring
max_error = max(error.max() for error in all_errors)
min_error = min(error.min() for error in all_errors)
for i in range(len(predictions)):
# Scene input
scene_rgb = (rgb_frames[i].permute(1, 2, 0).numpy() * 255).astype(np.uint8)
# Prediction output
pred_rgb = (np.clip(predictions[i].permute(1, 2, 0).numpy(), 0, 1) * 255).astype(np.uint8)
# Ground truth amodal
gt_rgb = (gt_amodal_frames[i].permute(1, 2, 0).numpy() * 255).astype(np.uint8)
# Error heatmap
# Error heatmap
error = all_errors[i]
# Normalize error to [0, 1] using global range
if max_error > min_error:
error_normalized = (error - min_error) / (max_error - min_error)
else:
error_normalized = error
# Ensure error is shape (H, W) before applying colormap
error_normalized = np.squeeze(error_normalized)
if error_normalized.ndim == 3:
error_normalized = error_normalized[0]
# Apply colormap
error_colored = cm.jet(error_normalized) # (H, W, 4)
error_rgb = (error_colored[:, :, :3] * 255).astype(np.uint8) # (H, W, 3)
# Now safe to concatenate
combined = np.concatenate([scene_rgb, pred_rgb, gt_rgb, error_rgb], axis=1)
# Add error scale text (simplified - you might want to add a proper colorbar)
from PIL import ImageDraw, ImageFont
img_pil = Image.fromarray(combined)
draw = ImageDraw.Draw(img_pil)
# Add text with error range
try:
font = ImageFont.load_default()
except:
font = None
text = f"Error: {min_error:.3f} - {max_error:.3f}"
draw.text((combined.shape[1] - 150, 10), text, fill=(255, 255, 255), font=font)
frames.append(img_pil)
# Save as animated GIF
frames[0].save(
output_path,
save_all=True,
append_images=frames[1:],
duration=duration,
loop=0
)
print(f"GIF with error heatmap saved to {output_path}")
print(f"Error range: {min_error:.4f} to {max_error:.4f}")
# Enhanced video generation with metrics
def load_model_and_generate_video_with_metrics(checkpoint_path, dataset, device,
output_path="amodal_completion.mp4", fps=8):
"""Load trained model and generate video with metrics calculation"""
import cv2
from pathlib import Path
# Initialize metrics calculator
metrics_calculator = VideoAmodalMetrics(device)
# Load model (your existing code remains the same)
model = Video3DUNet(in_channels=5, out_channels=3, sequence_length=8).to(device)
checkpoint = torch.load(checkpoint_path, map_location=device, weights_only=False)
model.load_state_dict(checkpoint['model_state_dict'])
model.eval()
print(f"Loaded model from epoch {checkpoint['epoch']} with loss {checkpoint['train_loss']:.4f}")
# Get a sample with 24 frames (your existing code)
sample = dataset[0]
seq_len = 8
total_frames = len(sample['rgb_sequence'])
print(f"Processing {total_frames} frames in windows of {seq_len}")
all_predictions = []
all_rgb = []
all_modal_masks = []
all_amodal_masks = []
all_metrics = []
with torch.no_grad():
# Process overlapping windows (your existing code)
for start_idx in range(0, total_frames - seq_len + 1, seq_len//2):
end_idx = min(start_idx + seq_len, total_frames)
# Create batch for this window
window_batch = {}
for key, value in sample.items():
if isinstance(value, torch.Tensor):
if value.dim() == 4:
window_batch[key] = value[start_idx:end_idx].unsqueeze(0)
else:
window_batch[key] = value.unsqueeze(0)
else:
window_batch[key] = [value]
# Get prediction for this window
inputs = prepare_model_input(window_batch).to(device)
pred = model(inputs)
# Mask to object region
amodal_mask = window_batch['amodal_masks'].permute(0, 2, 1, 3, 4).expand_as(pred).to(device)
pred_masked = pred * amodal_mask
# Calculate metrics for this window
target = prepare_model_target(window_batch).to(device)
window_metrics = metrics_calculator.calculate_all_metrics(pred, target, amodal_mask)
all_metrics.append(window_metrics)
# Store results (your existing code)
pred_frames = pred_masked.squeeze(0).permute(1, 0, 2, 3).cpu()
if start_idx == 0:
all_predictions.extend([pred_frames[i] for i in range(len(pred_frames))])
else:
overlap_frames = seq_len // 2
for i in range(overlap_frames):
if len(all_predictions) > start_idx + i:
all_predictions[start_idx + i] = (all_predictions[start_idx + i] + pred_frames[i]) / 2.0
for i in range(overlap_frames, len(pred_frames)):
if start_idx + i < total_frames:
all_predictions.append(pred_frames[i])
if start_idx == 0:
all_rgb = [sample['rgb_sequence'][i] for i in range(total_frames)]
all_modal_masks = [sample['modal_masks'][i] for i in range(total_frames)]
all_amodal_masks = [sample['amodal_masks'][i] for i in range(total_frames)]
all_gt_amodal = [sample['amodal_rgb_sequence'][i] for i in range(total_frames)]
# Print overall metrics
print("\nOverall Metrics:")
avg_metrics = {}
for key in all_metrics[0].keys():
avg_metrics[key] = np.mean([m[key] for m in all_metrics])
print(f" {key.upper()}: {avg_metrics[key]:.4f}")
# Your existing video creation code remains the same
all_predictions = all_predictions[:total_frames]
print(f"Generated {len(all_predictions)} prediction frames")
# Create video (your existing code)
height, width = all_predictions[0].shape[-2:]
video_width = width * 4
video_height = height
fourcc = cv2.VideoWriter_fourcc(*'mp4v')
out = cv2.VideoWriter(output_path, fourcc, fps, (video_width, video_height))
for i in range(len(all_predictions)):
scene_rgb = all_rgb[i].permute(1, 2, 0).numpy()
modal_mask = all_modal_masks[i][0].numpy()
modal_mask_rgb = np.stack([modal_mask, modal_mask, modal_mask], axis=2)
pred_rgb = all_predictions[i].permute(1, 2, 0).numpy()
pred_rgb = np.clip(pred_rgb, 0, 1)
try:
gt_amodal = sample['amodal_rgb_sequence'][i].permute(1, 2, 0).numpy()
amodal_mask_np = all_amodal_masks[i][0].numpy()
gt_amodal_masked = gt_amodal * amodal_mask_np[:, :, None]
except:
gt_amodal_masked = np.zeros_like(pred_rgb)
combined_frame = np.concatenate([
scene_rgb,
modal_mask_rgb,
pred_rgb,
gt_amodal_masked
], axis=1)
combined_frame_bgr = cv2.cvtColor((combined_frame * 255).astype(np.uint8), cv2.COLOR_RGB2BGR)
out.write(combined_frame_bgr)
if i % 5 == 0:
print(f"Processed frame {i+1}/{len(all_predictions)}")
out.release()
print(f"Video saved to {output_path}")
return all_predictions, all_rgb, all_gt_amodal, all_amodal_masks, avg_metrics
# Enhanced run function with all new features
def run_enhanced_video_generation():
"""Run video generation with metrics and error visualization"""
device = torch.device('cuda' if torch.cuda.is_available() else 'cpu')
# Load dataset
dataset = VideoAmodalDataset(
root_dir='data',
split='test',
seq_len=24,
img_size=(256, 256),
max_scenes=1,
samples_per_scene=1,
max_samples=1
)
# Generate video with metrics
checkpoint_path = "video_amodal_model_epoch_4.pth"
predictions, rgb_frames, gt_amodal_frames, amodal_masks, metrics = load_model_and_generate_video_with_metrics(
checkpoint_path,
dataset,
device,
output_path="amodal_completion_video_with_metrics.mp4",
fps=8
)
# Create enhanced GIF with error heatmap
create_gif_with_error_heatmap(
predictions,
rgb_frames,
gt_amodal_frames,
amodal_masks,
output_path="amodal_completion_with_error.gif",
duration=150
)
print("Enhanced video generation complete!")
return metrics
train_video_amodal_with_metrics()
# Simple way to run GIF generation from your trained model
import torch
def run_gif_generation():
"""Simple function to generate GIFs from your trained model"""
device = torch.device('cuda' if torch.cuda.is_available() else 'cpu')
# Create test dataset
dataset = VideoAmodalDataset(
root_dir='data',
split='test',
seq_len=24,
img_size=(256, 256),
max_scenes=50,
samples_per_scene=5,
max_samples=50
)
# Generate video with metrics and error heatmap GIF
checkpoint_path = "epoch_29.pth" # Change this to your checkpoint file name
predictions, rgb_frames, gt_amodal_frames, amodal_masks, metrics = load_model_and_generate_video_with_metrics(
checkpoint_path,
dataset,
device,
output_path="amodal_completion_video.mp4",
fps=6
)
# Create GIF with error heatmap
create_gif_with_error_heatmap(
predictions,
rgb_frames,
gt_amodal_frames,
amodal_masks,
output_path="amodal_completion_with_error.gif",
duration=150
)
print("GIF creation complete!")
print(f"Metrics: {metrics}")
# Just run this:
if __name__ == "__main__":
run_gif_generation()
import cv2
def draw_amodal_boundary(rgb_image, amodal_mask, color=(255, 0, 255)):
contours, _ = cv2.findContours(amodal_mask.astype(np.uint8), cv2.RETR_EXTERNAL, cv2.CHAIN_APPROX_SIMPLE)
outlined = rgb_image.copy()
cv2.drawContours(outlined, contours, -1, color, thickness=2)
return outlined
# Enhanced GIF creation with proper error heatmap and colorbar
def create_gif_with_error_heatmap(predictions, rgb_frames, gt_amodal_frames, amodal_masks,
output_path="amodal_completion_with_error.gif", duration=240):
"""Create animated GIF with proper error heatmap and colorbar"""
from PIL import Image, ImageDraw, ImageFont
import numpy as np
import matplotlib.pyplot as plt
import matplotlib.cm as cm
from matplotlib.colors import Normalize
import io
frames = []
all_errors = []
# Calculate errors for all frames first to get consistent color scale
for i in range(len(predictions)):
pred_tensor = predictions[i]
gt_tensor = gt_amodal_frames[i]
mask_tensor = amodal_masks[i] if amodal_masks else None
error = create_error_heatmap(pred_tensor.unsqueeze(0), gt_tensor.unsqueeze(0),
mask_tensor.unsqueeze(0) if mask_tensor is not None else None)
all_errors.append(error)
# Get global error range for consistent coloring
# Focus on masked regions only for better visualization
masked_errors = []
for i, error in enumerate(all_errors):
if amodal_masks is not None:
mask = amodal_masks[i][0].numpy()
masked_error = error * mask
masked_errors.extend(masked_error[masked_error > 0]) # Only non-zero masked regions
else:
masked_errors.extend(error.flatten())
if masked_errors:
# Use percentiles for better visualization (removes outliers)
min_error = np.percentile(masked_errors, 5) # 5th percentile
max_error = np.percentile(masked_errors, 95) # 95th percentile
else:
min_error = min(error.min() for error in all_errors)
max_error = max(error.max() for error in all_errors)
# Ensure we have a reasonable range
if max_error - min_error < 1e-6:
max_error = min_error + 1e-6
print(f"Error range for visualization: {min_error:.4f} to {max_error:.4f}")
# Create colorbar image
def create_colorbar(height=256, width=30):
# Create a vertical gradient
gradient = np.linspace(1, 0, height).reshape(-1, 1)
gradient = np.repeat(gradient, width, axis=1)
# Apply colormap (using 'hot' for red-yellow-white like your image)
cmap = cm.get_cmap('hot')
colorbar_colored = cmap(gradient)
colorbar_rgb = (colorbar_colored[:, :, :3] * 255).astype(np.uint8)
# Convert to PIL Image
colorbar_img = Image.fromarray(colorbar_rgb)
# Add scale labels
fig, ax = plt.subplots(figsize=(1, 4))
fig.patch.set_facecolor('black')
ax.set_facecolor('black')
# Create colorbar
norm = Normalize(vmin=min_error, vmax=max_error)
sm = cm.ScalarMappable(norm=norm, cmap='hot')
sm.set_array([])
cbar = plt.colorbar(sm, ax=ax, orientation='vertical', fraction=1.0)
cbar.set_label('Prediction Error', color='white', fontsize=10)
cbar.ax.tick_params(colors='white', labelsize=8)
# Remove the main axes
ax.remove()
# Save to bytes
buf = io.BytesIO()
plt.savefig(buf, format='png', bbox_inches='tight',
facecolor='black', edgecolor='none', dpi=100)
buf.seek(0)
colorbar_with_labels = Image.open(buf)
plt.close()
return colorbar_with_labels
# Create colorbar once
colorbar_img = create_colorbar()
colorbar_width = colorbar_img.width
for i in range(len(predictions)):
# Scene input
scene_rgb = (rgb_frames[i].permute(1, 2, 0).numpy() * 255).astype(np.uint8)
# Prediction output
pred_rgb = (np.clip(predictions[i].permute(1, 2, 0).numpy(), 0, 1) * 255).astype(np.uint8)
# Ground truth amodal
gt_rgb = (gt_amodal_frames[i].permute(1, 2, 0).numpy() * 255).astype(np.uint8)
# Error heatmap
error = all_errors[i]
# Apply mask to error if available
if amodal_masks is not None:
mask = amodal_masks[i][0].numpy()
error = error * mask
# Ensure error is shape (H, W)
error = np.squeeze(error)
if error.ndim == 3:
error = error[0]
# Normalize error using global range
error_normalized = np.clip((error - min_error) / (max_error - min_error), 0, 1)
# Apply 'hot' colormap for red-yellow-white heatmap like your image
cmap = cm.get_cmap('hot')
error_colored = cmap(error_normalized) # (H, W, 4)
error_rgb = (error_colored[:, :, :3] * 255).astype(np.uint8) # (H, W, 3)
# Set non-masked regions to black for better visualization
if amodal_masks is not None:
mask_3d = np.stack([mask, mask, mask], axis=2)
error_rgb = error_rgb * mask_3d.astype(np.uint8)
# Concatenate all images
highlighted_rgb = draw_amodal_boundary(scene_rgb, amodal_masks[i][0].cpu().numpy())
combined = np.concatenate([highlighted_rgb, pred_rgb, gt_rgb, error_rgb], axis=1)
# Convert to PIL for adding colorbar
img_pil = Image.fromarray(combined)
# Resize colorbar to match image height
colorbar_resized = colorbar_img.resize((colorbar_width, img_pil.height))
# Create final image with colorbar
final_width = img_pil.width + colorbar_width + 10 # 10px spacing
final_img = Image.new('RGB', (final_width, img_pil.height), color='black')
# Paste main image and colorbar
final_img.paste(img_pil, (0, 0))
final_img.paste(colorbar_resized, (img_pil.width + 10, 0))
# Add frame number
draw = ImageDraw.Draw(final_img)
try:
font = ImageFont.load_default()
except:
font = None
frame_text = f"Frame {i+1}/{len(predictions)}"
draw.text((10, 10), frame_text, fill=(0, 0, 0), font=font)
frames.append(final_img)
# Save as animated GIF
frames[0].save(
output_path,
save_all=True,
append_images=frames[1:],
duration=duration,
loop=0
)
print(f"GIF with proper error heatmap saved to {output_path}")
print(f"Error range: {min_error:.4f} to {max_error:.4f}")
print(f"Colorbar shows errors from low (black/red) to high (yellow/white)")
# Also update the error heatmap calculation to be more sensitive
def create_error_heatmap(pred, target, mask=None):
"""Create error heatmap between prediction and target with enhanced sensitivity"""
# Calculate per-pixel error (L2 norm across color channels)
error = torch.sqrt(torch.sum((pred - target) ** 2, dim=1)) # L2 error per pixel
# Alternative: Use L1 error for different characteristics
# error = torch.abs(pred - target).mean(dim=1) # L1 error
if mask is not None:
error = error * mask.squeeze()
return error.cpu().numpy()
|