Laiyf commited on
Commit
0bfaf24
·
verified ·
1 Parent(s): 249a3e6

Upload files

Browse files
.gitattributes CHANGED
@@ -33,3 +33,4 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
33
  *.zip filter=lfs diff=lfs merge=lfs -text
34
  *.zst filter=lfs diff=lfs merge=lfs -text
35
  *tfevents* filter=lfs diff=lfs merge=lfs -text
 
 
33
  *.zip filter=lfs diff=lfs merge=lfs -text
34
  *.zst filter=lfs diff=lfs merge=lfs -text
35
  *tfevents* filter=lfs diff=lfs merge=lfs -text
36
+ mimic_iv_text_embed.csv filter=lfs diff=lfs merge=lfs -text
mimic_iv_text_embed.csv ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:113eccc685c97aa8c48b837f3195a35e3ba3a4b549fd7103829a18537c9c2bff
3
+ size 107145253
mimic_vae.pt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:fa030135d76bf5c277001aba1208fe8d5f81e5c9e8409e3d11ac4ca85dbbda7f
3
+ size 2170256846
mimic_vae_lite.pt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:17f9352f761dadea53d8f91da36bf7c34cfcb75749441b98252b9a45caff0095
3
+ size 39692196
sample_config.json ADDED
@@ -0,0 +1,48 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "train_meta": {
3
+ "exp_name": "release",
4
+ "exp_type": "all",
5
+ "condition": true,
6
+ "vae_latent": true,
7
+ "device": "cuda:0",
8
+ "use_dictdataset": true
9
+ },
10
+
11
+ "dependencies": {
12
+ "dataset_path": "./prerequisites/mimic_vae_lite.pt",
13
+ "checkpoints_dir": "./checkpoints",
14
+ "vae_path": "./prerequisites/vae_model.pth",
15
+ "text_embed_path": "./prerequisites/mimic_iv_text_embed.csv"
16
+ },
17
+
18
+ "hyper_para": {
19
+ "epochs": 200,
20
+ "lr": 5e-4,
21
+ "batch_size": 512,
22
+ "num_train_steps": 1000,
23
+ "unet_kernel_size": 7,
24
+ "unet_num_level": 5,
25
+ "beta_start": 0.00085,
26
+ "beta_end": 0.0120
27
+ },
28
+
29
+ "inference_setting": {
30
+ "device": "cuda:0",
31
+ "inference_timestep": 1000,
32
+ "gen_batch": 4,
33
+ "save_img": true,
34
+ "verbose": false,
35
+ "save_path": "./test_sample",
36
+ "vae_path": "./prerequisites/vae_model.pth",
37
+ "unet_path": "./prerequisites/unet.pth",
38
+ "text": "Sinus rhythm.",
39
+ "text_embed_setting": {
40
+ "use_api": false,
41
+ "OPENAI_API_KEY": "",
42
+ "loacal_text_embed_path": "./prerequisites/mimic_iv_text_embed.csv"
43
+ },
44
+ "age": 50,
45
+ "hr": 90,
46
+ "gender": "M"
47
+ }
48
+ }
unet.pth ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1b96b7a975d32e5927193c1a3153e673b2d109cc3ae421d04cbd19f9d64d0c6f
3
+ size 5871546
vae_model.pth ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c2b4ef8060e412bd503f46b66dd44fc460e67a89de0ae1809dcc771358b3fa93
3
+ size 118289354