Update pipeline
Browse filesFix a bug when getting metadata license and topics, use list of dictionaries to store the results instead of a single dictionary by pushing repo name inwards, add repo stars to the result
- pipeline.py +32 -22
pipeline.py
CHANGED
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@@ -19,16 +19,12 @@ def extract_code_and_docs(text: str):
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tuple: A tuple of two sets, the first is the code set, and the second is the docs set,
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each set contains unique code string or docstring, respectively.
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"""
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root = ast.parse(text)
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def_nodes = [
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node
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for node in ast.walk(root)
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if isinstance(node, (AsyncFunctionDef, FunctionDef, ClassDef, Module))
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]
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code_set = set()
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docs_set = set()
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-
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docs = ast.get_docstring(node)
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node_without_docs = node
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if docs is not None:
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@@ -55,16 +51,22 @@ def get_metadata(repo_name, headers=None):
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def download_and_extract(repos, headers=None):
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-
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for repo_name in tqdm(repos, disable=len(repos) <= 1):
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# Get metadata
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metadata = get_metadata(repo_name, headers=headers)
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"funcs": set(),
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"docs": set(),
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"topics":
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"license":
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}
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# Download repo tarball bytes
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download_url = f"https://api.github.com/repos/{repo_name}/tarball"
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@@ -86,8 +88,8 @@ def download_and_extract(repos, headers=None):
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file_content = tar.extractfile(member).read().decode("utf-8")
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code_set, docs_set = extract_code_and_docs(file_content)
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-
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-
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except UnicodeDecodeError as e:
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tqdm.write(
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f"[-] UnicodeDecodeError in {member.name}, skipping: \n{e}"
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@@ -95,7 +97,9 @@ def download_and_extract(repos, headers=None):
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except SyntaxError as e:
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tqdm.write(f"[-] SyntaxError in {member.name}, skipping: \n{e}")
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-
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class RepoEmbeddingPipeline(Pipeline):
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@@ -140,6 +144,7 @@ class RepoEmbeddingPipeline(Pipeline):
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if self.st_messager:
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self.st_messager.info("[*] Downloading and extracting repos...")
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extracted_infos = download_and_extract(inputs, headers=self.API_HEADERS)
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return extracted_infos
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@@ -171,14 +176,19 @@ class RepoEmbeddingPipeline(Pipeline):
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return sentence_embeddings
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def _forward(self, extracted_infos, max_length=512, st_progress=None):
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repo_dataset =
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num_texts = sum(
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len(x["funcs"]) + len(x["docs"]) for x in extracted_infos.values()
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)
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with tqdm(total=num_texts) as pbar:
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for
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pbar.set_description(f"Processing {repo_name}")
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entry = {"topics": repo_info["topics"], "license": repo_info["license"]}
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message = f"[*] Generating embeddings for {repo_name}"
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tqdm.write(message)
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@@ -219,7 +229,7 @@ class RepoEmbeddingPipeline(Pipeline):
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else None
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)
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repo_dataset
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return repo_dataset
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tuple: A tuple of two sets, the first is the code set, and the second is the docs set,
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each set contains unique code string or docstring, respectively.
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"""
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code_set = set()
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docs_set = set()
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root = ast.parse(text)
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for node in ast.walk(root):
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if not isinstance(node, (AsyncFunctionDef, FunctionDef, ClassDef, Module)):
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continue
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docs = ast.get_docstring(node)
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node_without_docs = node
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if docs is not None:
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def download_and_extract(repos, headers=None):
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extracted_infos = []
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for repo_name in tqdm(repos, disable=len(repos) <= 1):
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# Get metadata
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metadata = get_metadata(repo_name, headers=headers)
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repo_info = {
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"name": repo_name,
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"funcs": set(),
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"docs": set(),
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"topics": [],
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"license": None,
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"stars": metadata.get("stargazers_count"),
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}
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if metadata.get("topics"):
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repo_info["topics"] = metadata["topics"]
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if metadata.get("license"):
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repo_info["license"] = metadata["license"]["spdx_id"]
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# Download repo tarball bytes
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download_url = f"https://api.github.com/repos/{repo_name}/tarball"
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file_content = tar.extractfile(member).read().decode("utf-8")
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code_set, docs_set = extract_code_and_docs(file_content)
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repo_info["funcs"].update(code_set)
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repo_info["docs"].update(docs_set)
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except UnicodeDecodeError as e:
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tqdm.write(
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f"[-] UnicodeDecodeError in {member.name}, skipping: \n{e}"
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except SyntaxError as e:
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tqdm.write(f"[-] SyntaxError in {member.name}, skipping: \n{e}")
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extracted_infos.append(repo_info)
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return extracted_infos
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class RepoEmbeddingPipeline(Pipeline):
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if self.st_messager:
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self.st_messager.info("[*] Downloading and extracting repos...")
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extracted_infos = download_and_extract(inputs, headers=self.API_HEADERS)
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return extracted_infos
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return sentence_embeddings
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def _forward(self, extracted_infos, max_length=512, st_progress=None):
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repo_dataset = []
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num_texts = sum(len(x["funcs"]) + len(x["docs"]) for x in extracted_infos)
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with tqdm(total=num_texts) as pbar:
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for repo_info in extracted_infos:
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repo_name = repo_info["name"]
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entry = {
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"name": repo_name,
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"topics": repo_info["topics"],
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"license": repo_info["license"],
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"stars": repo_info["stars"],
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}
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pbar.set_description(f"Processing {repo_name}")
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message = f"[*] Generating embeddings for {repo_name}"
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tqdm.write(message)
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else None
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)
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repo_dataset.append(entry)
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return repo_dataset
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