| { | |
| "_name_or_path": "bert-base-cased", | |
| "architectures": [ | |
| "BertForTokenClassification" | |
| ], | |
| "attention_probs_dropout_prob": 0.1, | |
| "classifier_dropout": null, | |
| "gradient_checkpointing": false, | |
| "hidden_act": "gelu", | |
| "hidden_dropout_prob": 0.1, | |
| "hidden_size": 768, | |
| "id2label": { | |
| "0": "O", | |
| "1": "B-BIOMARKER_ACTIONABLE_DRUG", | |
| "2": "I-BIOMARKER_ACTIONABLE_DRUG", | |
| "3": "B-BIOMARKER_CANDIDATE_DRUG", | |
| "4": "I-BIOMARKER_CANDIDATE_DRUG", | |
| "5": "B-BIOMARKER_EFFECT", | |
| "6": "I-BIOMARKER_EFFECT", | |
| "7": "B-BIOMARKER_MUTATION", | |
| "8": "I-BIOMARKER_MUTATION", | |
| "9": "B-CHROMOSOME", | |
| "10": "I-CHROMOSOME", | |
| "11": "B-COPY_NUMBER", | |
| "12": "I-COPY_NUMBER", | |
| "13": "B-FUSION_GENE", | |
| "14": "I-FUSION_GENE", | |
| "15": "B-FUSION_BREAKPOINT", | |
| "16": "I-FUSION_BREAKPOINT", | |
| "17": "B-FUSION_TRANSCRIPT", | |
| "18": "I-FUSION_TRANSCRIPT", | |
| "19": "B-FUSION_VARIANT", | |
| "20": "I-FUSION_VARIANT", | |
| "21": "B-GENE", | |
| "22": "I-GENE", | |
| "23": "B-MSI_RESULT", | |
| "24": "I-MSI_RESULT", | |
| "25": "B-NEG_BIOMARKER", | |
| "26": "I-NEG_BIOMARKER", | |
| "27": "B-POS_BIOMARKER", | |
| "28": "I-POS_BIOMARKER", | |
| "29": "B-REPORT_DATE", | |
| "30": "I-REPORT_DATE", | |
| "31": "B-REPORT_DIAGNOSIS", | |
| "32": "I-REPORT_DIAGNOSIS", | |
| "33": "B-REPORT_ID", | |
| "34": "I-REPORT_ID", | |
| "35": "B-REPORT_PATIENT_ID", | |
| "36": "I-REPORT_PATIENT_ID", | |
| "37": "B-REPORT_PATIENT_NAME", | |
| "38": "I-REPORT_PATIENT_NAME", | |
| "39": "B-REPORT_PHYSICIAN", | |
| "40": "I-REPORT_PHYSICIAN", | |
| "41": "B-REPORT_TEST_ASSAY", | |
| "42": "I-REPORT_TEST_ASSAY", | |
| "43": "B-TMB_RESULT", | |
| "44": "I-TMB_RESULT", | |
| "45": "B-VARIANT_ACCESSION", | |
| "46": "I-VARIANT_ACCESSION", | |
| "47": "B-VARIANT_ALLELE_AMPLIFICATION", | |
| "48": "I-VARIANT_ALLELE_AMPLIFICATION", | |
| "49": "B-VARIANT_ALLELE_FRACTION", | |
| "50": "I-VARIANT_ALLELE_FRACTION", | |
| "51": "B-VARIANT_ALLELE_FREQUENCY", | |
| "52": "I-VARIANT_ALLELE_FREQUENCY", | |
| "53": "B-VARIANT_AMINO_ACID_CHANGE", | |
| "54": "I-VARIANT_AMINO_ACID_CHANGE", | |
| "55": "B-VARIANT_COSMIC", | |
| "56": "I-VARIANT_COSMIC", | |
| "57": "B-VARIANT_COVERAGE", | |
| "58": "I-VARIANT_COVERAGE", | |
| "59": "B-VARIANT_EXON", | |
| "60": "I-VARIANT_EXON", | |
| "61": "B-VARIANT_FORM", | |
| "62": "I-VARIANT_FORM", | |
| "63": "B-VARIANT_HGVS", | |
| "64": "I-VARIANT_HGVS" | |
| }, | |
| "initializer_range": 0.02, | |
| "intermediate_size": 3072, | |
| "label2id": { | |
| "B-BIOMARKER_ACTIONABLE_DRUG": 1, | |
| "B-BIOMARKER_CANDIDATE_DRUG": 3, | |
| "B-BIOMARKER_EFFECT": 5, | |
| "B-BIOMARKER_MUTATION": 7, | |
| "B-CHROMOSOME": 9, | |
| "B-COPY_NUMBER": 11, | |
| "B-FUSION_BREAKPOINT": 15, | |
| "B-FUSION_GENE": 13, | |
| "B-FUSION_TRANSCRIPT": 17, | |
| "B-FUSION_VARIANT": 19, | |
| "B-GENE": 21, | |
| "B-MSI_RESULT": 23, | |
| "B-NEG_BIOMARKER": 25, | |
| "B-POS_BIOMARKER": 27, | |
| "B-REPORT_DATE": 29, | |
| "B-REPORT_DIAGNOSIS": 31, | |
| "B-REPORT_ID": 33, | |
| "B-REPORT_PATIENT_ID": 35, | |
| "B-REPORT_PATIENT_NAME": 37, | |
| "B-REPORT_PHYSICIAN": 39, | |
| "B-REPORT_TEST_ASSAY": 41, | |
| "B-TMB_RESULT": 43, | |
| "B-VARIANT_ACCESSION": 45, | |
| "B-VARIANT_ALLELE_AMPLIFICATION": 47, | |
| "B-VARIANT_ALLELE_FRACTION": 49, | |
| "B-VARIANT_ALLELE_FREQUENCY": 51, | |
| "B-VARIANT_AMINO_ACID_CHANGE": 53, | |
| "B-VARIANT_COSMIC": 55, | |
| "B-VARIANT_COVERAGE": 57, | |
| "B-VARIANT_EXON": 59, | |
| "B-VARIANT_FORM": 61, | |
| "B-VARIANT_HGVS": 63, | |
| "I-BIOMARKER_ACTIONABLE_DRUG": 2, | |
| "I-BIOMARKER_CANDIDATE_DRUG": 4, | |
| "I-BIOMARKER_EFFECT": 6, | |
| "I-BIOMARKER_MUTATION": 8, | |
| "I-CHROMOSOME": 10, | |
| "I-COPY_NUMBER": 12, | |
| "I-FUSION_BREAKPOINT": 16, | |
| "I-FUSION_GENE": 14, | |
| "I-FUSION_TRANSCRIPT": 18, | |
| "I-FUSION_VARIANT": 20, | |
| "I-GENE": 22, | |
| "I-MSI_RESULT": 24, | |
| "I-NEG_BIOMARKER": 26, | |
| "I-POS_BIOMARKER": 28, | |
| "I-REPORT_DATE": 30, | |
| "I-REPORT_DIAGNOSIS": 32, | |
| "I-REPORT_ID": 34, | |
| "I-REPORT_PATIENT_ID": 36, | |
| "I-REPORT_PATIENT_NAME": 38, | |
| "I-REPORT_PHYSICIAN": 40, | |
| "I-REPORT_TEST_ASSAY": 42, | |
| "I-TMB_RESULT": 44, | |
| "I-VARIANT_ACCESSION": 46, | |
| "I-VARIANT_ALLELE_AMPLIFICATION": 48, | |
| "I-VARIANT_ALLELE_FRACTION": 50, | |
| "I-VARIANT_ALLELE_FREQUENCY": 52, | |
| "I-VARIANT_AMINO_ACID_CHANGE": 54, | |
| "I-VARIANT_COSMIC": 56, | |
| "I-VARIANT_COVERAGE": 58, | |
| "I-VARIANT_EXON": 60, | |
| "I-VARIANT_FORM": 62, | |
| "I-VARIANT_HGVS": 64, | |
| "O": 0 | |
| }, | |
| "layer_norm_eps": 1e-12, | |
| "max_position_embeddings": 512, | |
| "model_type": "bert", | |
| "num_attention_heads": 12, | |
| "num_hidden_layers": 12, | |
| "pad_token_id": 0, | |
| "position_embedding_type": "absolute", | |
| "transformers_version": "4.32.1", | |
| "type_vocab_size": 2, | |
| "use_cache": true, | |
| "vocab_size": 28996 | |
| } | |