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@@ -42,25 +42,8 @@ BioHiCL aligns:
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  - Embedding similarity (SimE): cosine similarity between document embeddings
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  - Label similarity (SimL): cosine similarity over weighted MeSH multi-label vectors
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-
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- ### Training Objective
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- - Mean Squared Error (MSE): aligns SimE with SimL
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- - Hierarchical contrastive loss: separates unrelated documents while preserving ontology structure
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-
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  ---
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- ## 📖 Citation
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-
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- If you use this model, please cite:
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-
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- ```bibtex
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- @article{lan2026biohicl,
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- title={BioHiCL: Hierarchical Multi-Label Contrastive Learning for Biomedical Retrieval with MeSH Labels},
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- author={Lan, Mengfei and Zheng, Lecheng and Kilicoglu, Halil},
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- booktitle={ACL 2026},
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- year={2026}
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- }
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-
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  ---
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  ## 🚀 Usage (BEIR Evaluation)
@@ -90,4 +73,20 @@ results = retriever.search(corpus, queries, top_k=10, score_function="cos_sim")
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  # Evaluation
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  ndcg, _map, recall, precision = EvaluateRetrieval.evaluate(
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  qrels, results, k_values=[1, 3, 5, 10]
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- )
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  - Embedding similarity (SimE): cosine similarity between document embeddings
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  - Label similarity (SimL): cosine similarity over weighted MeSH multi-label vectors
 
 
 
 
 
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  ---
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  ---
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  ## 🚀 Usage (BEIR Evaluation)
 
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  # Evaluation
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  ndcg, _map, recall, precision = EvaluateRetrieval.evaluate(
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  qrels, results, k_values=[1, 3, 5, 10]
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+ )
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+
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+ ```
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+
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+ ## 📖 Citation
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+
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+ If you use this model, please cite:
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+
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+ ```bibtex
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+ @article{lan2026biohicl,
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+ title={BioHiCL: Hierarchical Multi-Label Contrastive Learning for Biomedical Retrieval with MeSH Labels},
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+ author={Lan, Mengfei and Zheng, Lecheng and Kilicoglu, Halil},
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+ booktitle={ACL 2026},
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+ year={2026}
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+ }
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+
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+ ```