{ "schema": "https://github.com/Project-MONAI/MONAI-extra-test-data/releases/download/0.8.1/meta_schema_20240725.json", "version": "0.5.8", "changelog": { "0.5.8": "enhance metadata with improved descriptions", "0.5.7": "update to huggingface hosting", "0.5.6": "use monai 1.4 and update large files", "0.5.5": "update to use monai 1.3.1", "0.5.4": "add load_pretrain flag for infer", "0.5.3": "update to use monai 1.3.0", "0.5.2": "update the checkpoint loader logic for inference", "0.5.1": "add option to validate at training start, and I/O param entries", "0.5.0": "enable finetune and early stop", "0.4.9": "fix orientation issue on clicks", "0.4.8": "Add infer transforms to manage clicks from viewer", "0.4.7": "fix the wrong GPU index issue of multi-node", "0.4.6": "update to use rc7 which solves dynunet issue", "0.4.5": "remove error dollar symbol in readme", "0.4.4": "add RAM comsumption with Cachedataset", "0.4.3": "update ONNX-TensorRT descriptions", "0.4.2": "deterministic retrain benchmark, update fig links", "0.4.1": "add the ONNX-TensorRT way of model conversion", "0.4.0": "fix mgpu finalize issue", "0.3.9": "enable deterministic training", "0.3.8": "adapt to BundleWorkflow interface", "0.3.7": "add name tag", "0.3.6": "restructure readme to match updated template", "0.3.5": "update metric in metadata", "0.3.4": "add validate.json file and dice score in readme", "0.3.3": "update to use monai 1.0.1", "0.3.2": "enhance readme on commands example", "0.3.1": "fix license Copyright error", "0.3.0": "update license files", "0.2.0": "unify naming", "0.1.0": "complete the model package", "0.0.1": "initialize the model package structure" }, "monai_version": "1.4.0", "pytorch_version": "2.4.0", "numpy_version": "1.24.4", "required_packages_version": { "itk": "5.4.0", "pytorch-ignite": "0.4.11", "scikit-image": "0.23.2", "einops": "0.7.0", "tensorboard": "2.17.0", "nibabel": "5.2.1" }, "supported_apps": {}, "name": "Spleen DeepEdit Interactive Segmentation", "task": "Interactive Spleen Segmentation in CT Images with Point-based Guidance", "description": "An interactive 3D segmentation model that processes 128x128x128 pixel patches from CT scans to segment the spleen. The model incorporates user-provided point annotations through the DeepEdit framework. It accepts positive and negative click inputs to refine segmentation boundaries in real-time.", "authors": "MONAI team", "copyright": "Copyright (c) MONAI Consortium", "data_source": "Task09_Spleen.tar from http://medicaldecathlon.com/", "data_type": "nibabel", "image_classes": "Three channel input: channel 0: CT image scaled to [0, 1], channels 1-2: positive and negative click maps", "label_classes": "Single channel binary mask: 1: spleen, 0: background", "pred_classes": "2 channels OneHot data, channel 1 is spleen, channel 0 is background", "eval_metrics": { "mean_dice": 0.97 }, "intended_use": "This is an example, not to be used for diagnostic purposes", "references": [ "Sakinis, Tomas, et al. 'Interactive segmentation of medical images through fully convolutional neural networks.' arXiv preprint arXiv:1903.08205 (2019)" ], "network_data_format": { "inputs": { "image": { "type": "image", "format": "hounsfield", "modality": "CT", "num_channels": 3, "spatial_shape": [ 128, 128, 128 ], "dtype": "float32", "value_range": [ 0, 1 ], "is_patch_data": false, "channel_def": { "0": "image" } } }, "outputs": { "pred": { "type": "image", "format": "segmentation", "num_channels": 2, "spatial_shape": [ 128, 128, 128 ], "dtype": "float32", "value_range": [ 0, 1 ], "is_patch_data": false, "channel_def": { "0": "background", "1": "spleen" } } } } }