| from language.energy import ( | |
| MaximizeGlobularity, | |
| MaximizePLDDT, | |
| MaximizePTM, | |
| MaximizeSurfaceExposure, | |
| MinimizeCRmsd, | |
| MinimizeDRmsd, | |
| MatchSecondaryStructure, | |
| MinimizeSurfaceExposure, | |
| MinimizeSurfaceHydrophobics, | |
| SymmetryRing, | |
| ) | |
| from language.folding_callbacks import EsmFoldv1, FoldingCallback, FoldingResult | |
| from language.optimize import run_simulated_annealing | |
| from language.program import ProgramNode | |
| from language.sequence import ( | |
| ConstantSequenceSegment, | |
| FixedLengthSequenceSegment, | |
| VariableLengthSequenceSegment, | |
| sequence_from_atomarray, | |
| ) | |
| from language.utilities import get_atomarray_in_residue_range, pdb_file_to_atomarray | |