| setting: | |
| seed: 20000812 | |
| os_environ: | |
| CUDA_VISIBLE_DEVICES: 1,2,3,4,5,6,7 | |
| MASTER_ADDR: 127.0.0.1 | |
| MASTER_PORT: 12316 | |
| WORLD_SIZE: 1 | |
| NODE_RANK: 0 | |
| out_path: ~ | |
| dataset_dir: scripts/LMDB/ClinVar | |
| model: | |
| model_py_path: saprot/saprot_mutation_model | |
| load_prev_scheduler: True | |
| kwargs: | |
| config_path: weight/PLMs/esm2_t33_650M_UR50D | |
| load_pretrained: True | |
| log_clinvar: True | |
| log_dir: output/ClinVar/esm2_t33_650M_UR50D | |
| dataset: | |
| dataset_py_path: mutation_zeroshot_dataset | |
| dataloader_kwargs: | |
| batch_size: 16 | |
| num_workers: 8 | |
| kwargs: {} | |
| Trainer: | |
| log_every_n_steps: 1 | |
| devices: 1 | |
| accelerator: gpu | |
| num_nodes: 1 | |
| strategy: | |
| find_unused_parameters: False | |
| logger: False | |