scripts/examples/example_af2_pdbdir.sh

#!/bin/bash
set -euo pipefail
ROOT="$(cd "$(dirname "${BASH_SOURCE[0]}")/../.." && pwd)"
cd "$ROOT"
python model/af2_initial_guess/predict.py \
  -pdbdir conf/examples/inputs/proteinmpnn_output_pdbs \
  -outpdbdir output/example_af2_pdbdir \
  -checkpoint_name output/example_af2_pdbdir.checkpoint \
  -scorefilename output/example_af2_pdbdir.sc