#!/usr/bin/env python import sys from pyrosetta import * from pyrosetta.rosetta import * init(" ".join(sys.argv[1:])) silent_files = utility.vector1_utility_file_FileName() for silent_file in basic.options.get_file_vector_option("in:file:silent"): silent_files.append(utility.file.FileName(silent_file)) input_stream = core.import_pose.pose_stream.SilentFilePoseInputStream(silent_files) pose = core.pose.Pose() while input_stream.has_another_pose(): input_stream.fill_pose(pose) pose.dump_pdb(core.pose.tag_from_pose(pose) + ".pdb")