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Biomolecular Complex Structure Prediction
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Nucleic Acids, Ligands
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protenix
File size: 3,367 Bytes
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[{
    "sequences": [
        {
            "proteinChain": {
                "sequence": "MGSSHHHHHHSSGLVPRGSHMSGKIQHKAVVPAPSRIPLTLSEIEDLRRKGFNQTEIAELYGVTRQAVSWHKKTYGGRLTTRQIVQQNWPWDTRKPHDKSKAFQRLRDHGEYMRVGSFRTMSEDKKKRLLSWWKMLRDNDLVLEFDPSIEPYEGMAGGGFRYVPRDISDDDLLIRVNEHTQLTAEGELLWSWPDDIEELLSEP",
                "count": 1,
                "msa": {
                    "precomputed_msa_dir": "./examples/7r6r/msa/1",
                    "pairing_db": "uniref100"
                }
            }
        },
        {
            "dnaSequence": {
                "sequence": "TTTCGGTGGCTGTCAAGCGGG",
                "count": 1
            }
        },
        {
            "dnaSequence": {
                "sequence": "CCCGCTTGACAGCCACCGAAA",
                "count": 1
            }
        }
    ],
    "name": "7r6r"
},
{
    "sequences": [
        {
            "proteinChain": {
                "sequence": "MASWSHPQFEKGGTHVAETSAPTRSEPDTRVLTLPGTASAPEFRLIDIDGLLNNRATTDVRDLGSGRLNAWGNSFPAAELPAPGSLITVAGIPFTWANAHARGDNIRCEGQVVDIPPGQYDWIYLLAASERRSEDTIWAHYDDGHADPLRVGISDFLDGTPAFGELSAFRTSRMHYPHHVQEGLPTTMWLTRVGMPRHGVARSLRLPRSVAMHVFALTLRTAAAVRLAEGATT",
                "count": 2,
                "msa": {
                    "precomputed_msa_dir": "./examples/7wux/msa/1",
                    "pairing_db": "uniref100"
                }
            }
        },
        {
            "proteinChain": {
                "sequence": "MGSSHHHHHHSQDPNSTTTAPPVELWTRDLGSCLHGTLATALIRDGHDPVTVLGAPWEFRRRPGAWSSEEYFFFAEPDSLAGRLALYHPFESTWHRSDGDGVDDLREALAAGVLPIAAVDNFHLPFRPAFHDVHAAHLLVVYRITETEVYVSDAQPPAFQGAIPLADFLASWGSLNPPDDADVFFSASPSGRRWLRTRMTGPVPEPDRHWVGRVIRENVARYRQEPPADTQTGLPGLRRYLDELCALTPGTNAASEALSELYVISWNIQAQSGLHAEFLRAHSVKWRIPELAEAAAGVDAVAHGWTGVRMTGAHSRVWQRHRPAELRGHATALVRRLEAALDLLELAADAVS",
                "count": 2,
                "msa": {
                    "precomputed_msa_dir": "./examples/7wux/msa/2",
                    "pairing_db": "uniref100"
                }
            }
        },
        {
            "ligand": {
                "ligand": "CCD_P4G",
                "count": 1
            }
        },
        {
            "ligand": {
                "ligand": "CCD_6OI",
                "count": 2
            }
        },
        {
            "ligand": {
                "ligand": "CCD_MG",
                "count": 3
            }
        }
    ],
    "name": "7wux"
},
{
    "sequences": [
        {
            "proteinChain": {
                "sequence": "MAEVIRSSAFWRSFPIFEEFDSETLCELSGIASYRKWSAGTVIFQRGDQGDYMIVVVSGRIKLSLFTPQGRELMLRQHEAGALFGEMALLDGQPRSADATAVTAAEGYVIGKKDFLALITQRPKTAEAVIRFLCAQLRDTTDRLETIALYDLNARVARFFLATLRQIHGSEMPQSANLRLTLSQTDIASILGASRPKVNRAILSLEESGAIKRADGIICCNVGRLLSIADPEEDLEHHHHHHHH",
                "count": 2,
                "msa": {
                    "precomputed_msa_dir": "./examples/7pzb/msa/1",
                    "pairing_db": "uniref100"
                }
            }
        },
        {
            "dnaSequence": {
                "sequence": "CTAGGTAACATTACTCGCG",
                "count": 2
            }
        },
        {
            "dnaSequence": {
                "sequence": "GCGAGTAATGTTAC",
                "count": 2
            }
        },
        {
            "ligand": {
                "ligand": "CCD_PCG",
                "count": 2
            }
        }
    ],
    "name": "7pzb"
}
]