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| import pytest |
| from pathlib import Path |
| import torch |
| import esm |
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| model_names = """ |
| esm1_t6_43M_UR50S, |
| esm1_t12_85M_UR50S, |
| esm1_t34_670M_UR50S, |
| esm1_t34_670M_UR50D, |
| esm1_t34_670M_UR100, |
| esm1b_t33_650M_UR50S, |
| esm_msa1_t12_100M_UR50S, |
| esm_msa1b_t12_100M_UR50S, |
| esm1v_t33_650M_UR90S, |
| esm1v_t33_650M_UR90S_1, |
| esm1v_t33_650M_UR90S_2, |
| esm1v_t33_650M_UR90S_3, |
| esm1v_t33_650M_UR90S_4, |
| esm1v_t33_650M_UR90S_5, |
| esm_if1_gvp4_t16_142M_UR50, |
| esm2_t6_8M_UR50D, |
| esm2_t12_35M_UR50D, |
| esm2_t30_150M_UR50D, |
| esm2_t33_650M_UR50D, |
| esm2_t36_3B_UR50D, |
| esm2_t48_15B_UR50D |
| """ |
| model_names = [mn.strip() for mn in model_names.strip(" ,\n").split(",")] |
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| @pytest.mark.parametrize("model_name", model_names) |
| def test_load_hub_fwd_model(model_name: str) -> None: |
| model, alphabet = getattr(esm.pretrained, model_name)() |
| |
| dummy_inp = torch.tensor([[0, 1, 2], [3, 4, 5]]) |
| if "esm_msa" in model_name: |
| dummy_inp = dummy_inp.unsqueeze(0) |
| output = model(dummy_inp) |
| logits = output["logits"].squeeze(0) |
| assert logits.shape == (2, 3, len(alphabet)) |
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| @pytest.mark.parametrize("model_name", model_names) |
| def test_load_local(model_name: str) -> None: |
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| local_path = Path.home() / ".cache/torch/hub/checkpoints" / (model_name + ".pt") |
| if model_name.endswith("esm1v_t33_650M_UR90S"): |
| return |
| model, alphabet = esm.pretrained.load_model_and_alphabet_local(local_path) |
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