File size: 10,129 Bytes

1db83f1

,,,,R@1,R@1,R@10,R@10,pair_acc,pair_acc
,,,,mean,std,mean,std,mean,std
regime,name,kind,pair,,,,,,
S1,"separate, frozen anchor",trained,H&E<->mIF (ORION),0.6798,0.0341,0.9833,0.0081,0.8965,0.0391
S1,"separate, frozen anchor",trained,H&E<->RNA (HEST),0.1483,0.0228,0.5492,0.0937,0.1718,0.0274
S1,"separate, frozen anchor",trained,H&E<->text (TCGA),0.2339,0.0067,0.7281,0.0081,0.2424,0.0077
S1,"separate, frozen anchor",emergent,mIF<->RNA(virtual) (ORION),0.1083,0.0174,0.5364,0.0317,0.1579,0.0218
S1,"separate, frozen anchor",emergent,mIF<->text(synthetic) (ORION),0.0764,0.0124,0.445,0.0249,0.0807,0.0138
S1,"separate, frozen anchor",emergent,text<->RNA(virtual) (TCGA),0.06,0.0028,0.3288,0.0121,0.0627,0.0042
S1,"separate, frozen anchor",emergent,text<->mIF(MIPHEI) (TCGA),0.0379,0.0048,0.2426,0.0222,0.0394,0.0056
S2,"separate, two-tower",trained,H&E<->mIF (ORION),0.7937,0.0413,0.9808,0.0146,0.9134,0.0425
S2,"separate, two-tower",trained,H&E<->RNA (HEST),0.13,0.0309,0.4927,0.0807,0.1317,0.0343
S2,"separate, two-tower",trained,H&E<->text (TCGA),0.1947,0.0199,0.6679,0.0714,0.1943,0.0237
S2,"separate, two-tower",emergent,mIF<->RNA(virtual) (ORION),0.0193,0.0054,0.1448,0.0196,0.0155,0.004
S2,"separate, two-tower",emergent,mIF<->text(synthetic) (ORION),0.0218,0.0025,0.1765,0.0106,0.0205,0.0025
S2,"separate, two-tower",emergent,text<->RNA(virtual) (TCGA),0.014,0.0025,0.1262,0.0093,0.0171,0.0013
S2,"separate, two-tower",emergent,text<->mIF(MIPHEI) (TCGA),0.0134,0.0024,0.1242,0.0089,0.0133,0.0031
J1,"joint, frozen anchor",trained,H&E<->mIF (ORION),0.7057,0.044,0.9828,0.0061,0.9009,0.0387
J1,"joint, frozen anchor",trained,H&E<->RNA (HEST),0.1484,0.0293,0.5384,0.0973,0.1687,0.0377
J1,"joint, frozen anchor",trained,H&E<->text (TCGA),0.2365,0.0083,0.7219,0.0103,0.243,0.0126
J1,"joint, frozen anchor",emergent,mIF<->RNA(virtual) (ORION),0.0939,0.0216,0.4704,0.051,0.1223,0.0343
J1,"joint, frozen anchor",emergent,mIF<->text(synthetic) (ORION),0.0652,0.0109,0.387,0.0236,0.0646,0.0115
J1,"joint, frozen anchor",emergent,text<->RNA(virtual) (TCGA),0.0561,0.0074,0.3048,0.024,0.0546,0.0048
J1,"joint, frozen anchor",emergent,text<->mIF(MIPHEI) (TCGA),0.031,0.0049,0.2122,0.0132,0.0326,0.0053
J2,"joint, shared H&E head",trained,H&E<->mIF (ORION),0.7609,0.0343,0.9826,0.0151,0.9107,0.0392
J2,"joint, shared H&E head",trained,H&E<->RNA (HEST),0.1467,0.0328,0.5499,0.1021,0.1574,0.0463
J2,"joint, shared H&E head",trained,H&E<->text (TCGA),0.2044,0.0127,0.6759,0.0306,0.2016,0.0181
J2,"joint, shared H&E head",emergent,mIF<->RNA(virtual) (ORION),0.0609,0.0087,0.3605,0.0342,0.0882,0.0186
J2,"joint, shared H&E head",emergent,mIF<->text(synthetic) (ORION),0.0598,0.0049,0.3782,0.0198,0.0624,0.0124
J2,"joint, shared H&E head",emergent,text<->RNA(virtual) (TCGA),0.0442,0.0063,0.2758,0.0229,0.0516,0.0068
J2,"joint, shared H&E head",emergent,text<->mIF(MIPHEI) (TCGA),0.0306,0.0046,0.2196,0.0177,0.033,0.0081
J3,"joint, shared H&E head, size-prop.",trained,H&E<->mIF (ORION),0.7397,0.035,0.9826,0.0139,0.8955,0.0401
J3,"joint, shared H&E head, size-prop.",trained,H&E<->RNA (HEST),0.1384,0.0319,0.5223,0.0799,0.1436,0.0403
J3,"joint, shared H&E head, size-prop.",trained,H&E<->text (TCGA),0.1871,0.0215,0.6313,0.0434,0.1759,0.0244
J3,"joint, shared H&E head, size-prop.",emergent,mIF<->RNA(virtual) (ORION),0.0632,0.0157,0.3701,0.0613,0.0872,0.027
J3,"joint, shared H&E head, size-prop.",emergent,mIF<->text(synthetic) (ORION),0.0598,0.006,0.3649,0.0276,0.0593,0.0094
J3,"joint, shared H&E head, size-prop.",emergent,text<->RNA(virtual) (TCGA),0.0387,0.0015,0.2491,0.0153,0.0445,0.002
J3,"joint, shared H&E head, size-prop.",emergent,text<->mIF(MIPHEI) (TCGA),0.0305,0.004,0.213,0.0196,0.0312,0.0057
J4,"joint, shared H&E head + distill",trained,H&E<->mIF (ORION),0.7646,0.0269,0.9829,0.0158,0.9123,0.0421
J4,"joint, shared H&E head + distill",trained,H&E<->RNA (HEST),0.1437,0.0241,0.5492,0.0812,0.1508,0.0309
J4,"joint, shared H&E head + distill",trained,H&E<->text (TCGA),0.2025,0.017,0.6587,0.0373,0.1953,0.0183
J4,"joint, shared H&E head + distill",emergent,mIF<->RNA(virtual) (ORION),0.0624,0.0152,0.3558,0.052,0.0799,0.0231
J4,"joint, shared H&E head + distill",emergent,mIF<->text(synthetic) (ORION),0.0582,0.007,0.358,0.0453,0.0574,0.0093
J4,"joint, shared H&E head + distill",emergent,text<->RNA(virtual) (TCGA),0.0429,0.0048,0.2652,0.0209,0.05,0.0069
J4,"joint, shared H&E head + distill",emergent,text<->mIF(MIPHEI) (TCGA),0.0305,0.005,0.2178,0.0189,0.0343,0.0059
J5,"joint, residual adapter",trained,H&E<->mIF (ORION),0.7621,0.0464,0.9807,0.0105,0.9054,0.0372
J5,"joint, residual adapter",trained,H&E<->RNA (HEST),0.142,0.0275,0.5348,0.0885,0.1519,0.0355
J5,"joint, residual adapter",trained,H&E<->text (TCGA),0.2011,0.0152,0.6598,0.0413,0.1951,0.0188
J5,"joint, residual adapter",emergent,mIF<->RNA(virtual) (ORION),0.0575,0.0134,0.3535,0.0363,0.0812,0.0247
J5,"joint, residual adapter",emergent,mIF<->text(synthetic) (ORION),0.0593,0.0134,0.3835,0.0471,0.0627,0.0153
J5,"joint, residual adapter",emergent,text<->RNA(virtual) (TCGA),0.0442,0.0041,0.2706,0.0234,0.0456,0.0051
J5,"joint, residual adapter",emergent,text<->mIF(MIPHEI) (TCGA),0.0294,0.0042,0.2108,0.015,0.0297,0.0072
S3,"separate, frozen anchor, linear head",trained,H&E<->mIF (ORION),0.6419,0.0356,0.9795,0.0108,0.8825,0.0523
S3,"separate, frozen anchor, linear head",trained,H&E<->RNA (HEST),0.1562,0.0238,0.5582,0.0887,0.1868,0.0437
S3,"separate, frozen anchor, linear head",trained,H&E<->text (TCGA),0.2365,0.0061,0.7286,0.008,0.2496,0.0053
S3,"separate, frozen anchor, linear head",emergent,mIF<->RNA(virtual) (ORION),0.1225,0.0088,0.575,0.0269,0.1774,0.0137
S3,"separate, frozen anchor, linear head",emergent,mIF<->text(synthetic) (ORION),0.0705,0.0122,0.4284,0.025,0.0738,0.011
S3,"separate, frozen anchor, linear head",emergent,text<->RNA(virtual) (TCGA),0.0689,0.002,0.3703,0.0106,0.0782,0.0031
S3,"separate, frozen anchor, linear head",emergent,text<->mIF(MIPHEI) (TCGA),0.0384,0.0014,0.2507,0.0073,0.0429,0.0024
J4b,"joint, shared H&E head + distill x10",trained,H&E<->mIF (ORION),0.7679,0.0325,0.9847,0.0156,0.916,0.0379
J4b,"joint, shared H&E head + distill x10",trained,H&E<->RNA (HEST),0.1491,0.0335,0.5569,0.1108,0.1624,0.0517
J4b,"joint, shared H&E head + distill x10",trained,H&E<->text (TCGA),0.2087,0.0094,0.6737,0.0317,0.2034,0.0139
J4b,"joint, shared H&E head + distill x10",emergent,mIF<->RNA(virtual) (ORION),0.067,0.0148,0.3747,0.0606,0.0891,0.0204
J4b,"joint, shared H&E head + distill x10",emergent,mIF<->text(synthetic) (ORION),0.0583,0.005,0.3603,0.0286,0.0581,0.0072
J4b,"joint, shared H&E head + distill x10",emergent,text<->RNA(virtual) (TCGA),0.0469,0.003,0.2767,0.0185,0.0532,0.006
J4b,"joint, shared H&E head + distill x10",emergent,text<->mIF(MIPHEI) (TCGA),0.0299,0.0028,0.2091,0.0202,0.0324,0.005
J6,"joint, shared H&E head, uncertainty wt.",trained,H&E<->mIF (ORION),0.7648,0.034,0.9805,0.0174,0.9084,0.0416
J6,"joint, shared H&E head, uncertainty wt.",trained,H&E<->RNA (HEST),0.1363,0.0335,0.5198,0.1074,0.1411,0.0407
J6,"joint, shared H&E head, uncertainty wt.",trained,H&E<->text (TCGA),0.1955,0.0216,0.6422,0.0687,0.1894,0.0267
J6,"joint, shared H&E head, uncertainty wt.",emergent,mIF<->RNA(virtual) (ORION),0.0571,0.0084,0.3366,0.0441,0.0749,0.0215
J6,"joint, shared H&E head, uncertainty wt.",emergent,mIF<->text(synthetic) (ORION),0.0546,0.0145,0.3521,0.0553,0.0564,0.0203
J6,"joint, shared H&E head, uncertainty wt.",emergent,text<->RNA(virtual) (TCGA),0.041,0.0084,0.2576,0.0346,0.0454,0.009
J6,"joint, shared H&E head, uncertainty wt.",emergent,text<->mIF(MIPHEI) (TCGA),0.0273,0.0072,0.207,0.0359,0.0314,0.0107
J7,two-stage: separate -> joint residual,trained,H&E<->mIF (ORION),0.7756,0.0306,0.9875,0.0098,0.9336,0.0299
J7,two-stage: separate -> joint residual,trained,H&E<->RNA (HEST),0.1496,0.0248,0.5443,0.0977,0.1678,0.0344
J7,two-stage: separate -> joint residual,trained,H&E<->text (TCGA),0.2343,0.012,0.7111,0.0232,0.2319,0.0201
J7,two-stage: separate -> joint residual,emergent,mIF<->RNA(virtual) (ORION),0.1003,0.0184,0.5007,0.042,0.1426,0.0272
J7,two-stage: separate -> joint residual,emergent,mIF<->text(synthetic) (ORION),0.076,0.0146,0.4212,0.0229,0.0758,0.0165
J7,two-stage: separate -> joint residual,emergent,text<->RNA(virtual) (TCGA),0.0546,0.0031,0.3067,0.0153,0.0566,0.0052
J7,two-stage: separate -> joint residual,emergent,text<->mIF(MIPHEI) (TCGA),0.0351,0.0041,0.2192,0.0205,0.0366,0.0058
S4,"separate, frozen, MLP mIF + linear RNA/text",trained,H&E<->mIF (ORION),0.6798,0.0341,0.9833,0.0081,0.8965,0.0391
S4,"separate, frozen, MLP mIF + linear RNA/text",trained,H&E<->RNA (HEST),0.1519,0.0251,0.5719,0.0883,0.1876,0.0474
S4,"separate, frozen, MLP mIF + linear RNA/text",trained,H&E<->text (TCGA),0.2338,0.0082,0.7272,0.0072,0.2488,0.0074
S4,"separate, frozen, MLP mIF + linear RNA/text",emergent,mIF<->RNA(virtual) (ORION),0.1168,0.0167,0.5689,0.0477,0.1807,0.0168
S4,"separate, frozen, MLP mIF + linear RNA/text",emergent,mIF<->text(synthetic) (ORION),0.0738,0.0124,0.4394,0.0207,0.0792,0.009
S4,"separate, frozen, MLP mIF + linear RNA/text",emergent,text<->RNA(virtual) (TCGA),0.0712,0.0046,0.3793,0.0243,0.0779,0.0037
S4,"separate, frozen, MLP mIF + linear RNA/text",emergent,text<->mIF(MIPHEI) (TCGA),0.037,0.0047,0.2407,0.0157,0.0392,0.0049
J8,two-stage from S4 heads -> joint residual,trained,H&E<->mIF (ORION),0.7625,0.0307,0.9896,0.0085,0.9294,0.029
J8,two-stage from S4 heads -> joint residual,trained,H&E<->RNA (HEST),0.1636,0.0285,0.577,0.0924,0.1982,0.0526
J8,two-stage from S4 heads -> joint residual,trained,H&E<->text (TCGA),0.2322,0.0063,0.7186,0.0141,0.2368,0.0091
J8,two-stage from S4 heads -> joint residual,emergent,mIF<->RNA(virtual) (ORION),0.1125,0.0063,0.5425,0.0371,0.1694,0.0153
J8,two-stage from S4 heads -> joint residual,emergent,mIF<->text(synthetic) (ORION),0.0725,0.0119,0.4147,0.0298,0.0757,0.0102
J8,two-stage from S4 heads -> joint residual,emergent,text<->RNA(virtual) (TCGA),0.0683,0.0058,0.3718,0.0147,0.0746,0.0038
J8,two-stage from S4 heads -> joint residual,emergent,text<->mIF(MIPHEI) (TCGA),0.0345,0.0039,0.2218,0.0152,0.0352,0.0051