File size: 18,142 Bytes
1db83f1
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
,,,,R@1,R@1,R@10,R@10,pair_acc,pair_acc
,,,,mean,std,mean,std,mean,std
enc,head,kind,pair,,,,,,
hvg,linear,trained,H&E<->RNA (HEST),0.155,0.0275,0.5593,0.1026,0.1822,0.0458
hvg,linear,emergent,mIF<->RNA(virtual) (ORION),0.1241,0.0064,0.5855,0.0184,0.1909,0.014
hvg,linear,emergent,text<->RNA(virtual) (TCGA),0.0688,0.0035,0.3779,0.0213,0.0772,0.0046
hvg,linear,calib,H&E<->RNA(virtual) (HEST),0.1984,0.0288,0.6216,0.0776,0.363,0.0474
hvg,linear,external,H&E<->RNA (DLPFC external),0.0091,0.0022,0.1083,0.0112,0.0133,0.0036
hvg,mlp,trained,H&E<->RNA (HEST),0.1502,0.0242,0.5548,0.0953,0.1752,0.033
hvg,mlp,emergent,mIF<->RNA(virtual) (ORION),0.102,0.0105,0.5164,0.0454,0.1429,0.0181
hvg,mlp,emergent,text<->RNA(virtual) (TCGA),0.062,0.0059,0.336,0.014,0.0623,0.0049
hvg,mlp,calib,H&E<->RNA(virtual) (HEST),0.1355,0.0323,0.4921,0.1053,0.2029,0.0606
hvg,mlp,external,H&E<->RNA (DLPFC external),0.0114,0.0021,0.1111,0.0023,0.0138,0.004
scgpt,linear,trained,H&E<->RNA (HEST),0.1549,0.0298,0.5595,0.108,0.1838,0.0392
scgpt,linear,emergent,mIF<->RNA(virtual) (ORION),0.0866,0.0113,0.4982,0.0182,0.0899,0.0136
scgpt,linear,emergent,text<->RNA(virtual) (TCGA),0.0499,0.0095,0.2804,0.016,0.0429,0.0073
scgpt,linear,calib,H&E<->RNA(virtual) (HEST),0.0961,0.0144,0.4012,0.0357,0.1058,0.0163
scgpt,linear,external,H&E<->RNA (DLPFC external),0.0129,0.0009,0.1083,0.0055,0.0135,0.0032
scgpt,mlp,trained,H&E<->RNA (HEST),0.1518,0.0314,0.5408,0.1095,0.1718,0.042
scgpt,mlp,emergent,mIF<->RNA(virtual) (ORION),0.0826,0.0058,0.448,0.0233,0.0835,0.0069
scgpt,mlp,emergent,text<->RNA(virtual) (TCGA),0.0437,0.0073,0.2728,0.0121,0.0384,0.0072
scgpt,mlp,calib,H&E<->RNA(virtual) (HEST),0.0912,0.014,0.3893,0.0326,0.0993,0.0162
scgpt,mlp,external,H&E<->RNA (DLPFC external),0.0093,0.0017,0.1005,0.0086,0.0091,0.0032
nicheformer,linear,trained,H&E<->RNA (HEST),0.152,0.0256,0.5608,0.0978,0.1808,0.0407
nicheformer,linear,emergent,mIF<->RNA(virtual) (ORION),0.104,0.0075,0.5479,0.0362,0.1197,0.0188
nicheformer,linear,emergent,text<->RNA(virtual) (TCGA),0.0555,0.0046,0.286,0.0219,0.0489,0.0069
nicheformer,linear,calib,H&E<->RNA(virtual) (HEST),0.0969,0.014,0.4128,0.0419,0.1143,0.0185
nicheformer,linear,external,H&E<->RNA (DLPFC external),0.0063,0.0022,0.1034,0.0123,0.0082,0.0028
nicheformer,mlp,trained,H&E<->RNA (HEST),0.1538,0.0304,0.5309,0.1001,0.1704,0.0373
nicheformer,mlp,emergent,mIF<->RNA(virtual) (ORION),0.089,0.0081,0.488,0.0271,0.0934,0.0101
nicheformer,mlp,emergent,text<->RNA(virtual) (TCGA),0.0444,0.0082,0.2585,0.0301,0.0397,0.0106
nicheformer,mlp,calib,H&E<->RNA(virtual) (HEST),0.0835,0.0136,0.3485,0.0402,0.0894,0.0155
nicheformer,mlp,external,H&E<->RNA (DLPFC external),0.0089,0.0024,0.1031,0.0139,0.0084,0.0032
se600m,linear,trained,H&E<->RNA (HEST),0.15,0.0295,0.5461,0.1081,0.1781,0.0406
se600m,linear,emergent,mIF<->RNA(virtual) (ORION),0.117,0.021,0.5758,0.0454,0.149,0.0231
se600m,linear,emergent,text<->RNA(virtual) (TCGA),0.0617,0.0092,0.3329,0.0275,0.0637,0.0102
se600m,linear,calib,H&E<->RNA(virtual) (HEST),0.1432,0.0235,0.5076,0.0601,0.1983,0.0379
se600m,linear,external,H&E<->RNA (DLPFC external),0.0106,0.0017,0.1025,0.0071,0.0115,0.0032
se600m,mlp,trained,H&E<->RNA (HEST),0.1357,0.0291,0.5329,0.1019,0.1557,0.0411
se600m,mlp,emergent,mIF<->RNA(virtual) (ORION),0.0957,0.0044,0.524,0.011,0.1204,0.0053
se600m,mlp,emergent,text<->RNA(virtual) (TCGA),0.0562,0.0066,0.3111,0.0318,0.0522,0.0076
se600m,mlp,calib,H&E<->RNA(virtual) (HEST),0.1204,0.0175,0.4692,0.0636,0.1531,0.0372
se600m,mlp,external,H&E<->RNA (DLPFC external),0.0105,0.0013,0.1068,0.0101,0.0091,0.0016
tahoex1,linear,trained,H&E<->RNA (HEST),0.1664,0.0319,0.5578,0.1082,0.1962,0.0504
tahoex1,linear,emergent,mIF<->RNA(virtual) (ORION),0.0868,0.0093,0.4588,0.0396,0.0969,0.0241
tahoex1,linear,emergent,text<->RNA(virtual) (TCGA),0.0388,0.005,0.2436,0.0304,0.037,0.0084
tahoex1,linear,calib,H&E<->RNA(virtual) (HEST),0.0701,0.0088,0.3368,0.0325,0.0905,0.0109
tahoex1,linear,external,H&E<->RNA (DLPFC external),0.0106,0.0029,0.109,0.0081,0.012,0.0012
tahoex1,mlp,trained,H&E<->RNA (HEST),0.1642,0.0364,0.5478,0.1256,0.1859,0.0534
tahoex1,mlp,emergent,mIF<->RNA(virtual) (ORION),0.0803,0.0097,0.4154,0.0575,0.0806,0.0139
tahoex1,mlp,emergent,text<->RNA(virtual) (TCGA),0.0384,0.0076,0.2326,0.037,0.0359,0.0064
tahoex1,mlp,calib,H&E<->RNA(virtual) (HEST),0.0577,0.0082,0.2836,0.0197,0.0651,0.0108
tahoex1,mlp,external,H&E<->RNA (DLPFC external),0.0105,0.0021,0.1004,0.0084,0.0093,0.0015
genept-bge,linear,trained,H&E<->RNA (HEST),0.141,0.0236,0.5451,0.0839,0.1618,0.0344
genept-bge,linear,emergent,mIF<->RNA(virtual) (ORION),0.0928,0.015,0.5095,0.0328,0.1292,0.0226
genept-bge,linear,emergent,text<->RNA(virtual) (TCGA),0.0562,0.0053,0.3196,0.0126,0.0596,0.0028
genept-bge,linear,calib,H&E<->RNA(virtual) (HEST),0.1164,0.0155,0.4658,0.0447,0.1597,0.0262
genept-bge,linear,external,H&E<->RNA (DLPFC external),0.0086,0.0016,0.0914,0.0112,0.0082,0.002
genept-bge,mlp,trained,H&E<->RNA (HEST),0.1492,0.0317,0.5484,0.0904,0.169,0.0421
genept-bge,mlp,emergent,mIF<->RNA(virtual) (ORION),0.0813,0.0104,0.4154,0.0286,0.0898,0.0133
genept-bge,mlp,emergent,text<->RNA(virtual) (TCGA),0.0349,0.0057,0.2265,0.007,0.0341,0.003
genept-bge,mlp,calib,H&E<->RNA(virtual) (HEST),0.0707,0.0083,0.319,0.0233,0.0823,0.0125
genept-bge,mlp,external,H&E<->RNA (DLPFC external),0.0101,0.0015,0.1026,0.0094,0.0114,0.0012
geneformer,linear,trained,H&E<->RNA (HEST),0.1639,0.0273,0.5636,0.1048,0.196,0.0422
geneformer,linear,emergent,mIF<->RNA(virtual) (ORION),0.0711,0.0063,0.4193,0.0431,0.075,0.0082
geneformer,linear,emergent,text<->RNA(virtual) (TCGA),0.0372,0.0071,0.226,0.0228,0.0374,0.0064
geneformer,linear,calib,H&E<->RNA(virtual) (HEST),0.0637,0.0058,0.299,0.0231,0.0788,0.0133
geneformer,linear,external,H&E<->RNA (DLPFC external),0.0101,0.002,0.0963,0.004,0.0055,0.0017
geneformer,mlp,trained,H&E<->RNA (HEST),0.1589,0.0319,0.5527,0.0925,0.1867,0.0391
geneformer,mlp,emergent,mIF<->RNA(virtual) (ORION),0.0629,0.0089,0.3828,0.0309,0.0636,0.0096
geneformer,mlp,emergent,text<->RNA(virtual) (TCGA),0.0343,0.0076,0.2192,0.035,0.0335,0.0093
geneformer,mlp,calib,H&E<->RNA(virtual) (HEST),0.051,0.0056,0.266,0.033,0.061,0.0182
geneformer,mlp,external,H&E<->RNA (DLPFC external),0.0108,0.0015,0.0943,0.001,0.009,0.0027
c2s,linear,trained,H&E<->RNA (HEST),0.155,0.0398,0.5379,0.121,0.1813,0.0561
c2s,linear,emergent,mIF<->RNA(virtual) (ORION),0.1007,0.0139,0.5318,0.0297,0.109,0.0154
c2s,linear,emergent,text<->RNA(virtual) (TCGA),0.0552,0.0064,0.3077,0.0275,0.05,0.0061
c2s,linear,calib,H&E<->RNA(virtual) (HEST),0.1115,0.0207,0.436,0.0685,0.1278,0.0308
c2s,linear,external,H&E<->RNA (DLPFC external),0.0107,0.0029,0.1042,0.0057,0.0111,0.003
c2s,mlp,trained,H&E<->RNA (HEST),0.1432,0.0374,0.5061,0.1114,0.16,0.0525
c2s,mlp,emergent,mIF<->RNA(virtual) (ORION),0.0884,0.0122,0.4889,0.0239,0.0912,0.0131
c2s,mlp,emergent,text<->RNA(virtual) (TCGA),0.0498,0.0044,0.2917,0.0128,0.0424,0.0055
c2s,mlp,calib,H&E<->RNA(virtual) (HEST),0.1008,0.0166,0.4007,0.0473,0.1075,0.0201
c2s,mlp,external,H&E<->RNA (DLPFC external),0.01,0.0013,0.1,0.0053,0.0104,0.0033
c2s-last,linear,trained,H&E<->RNA (HEST),0.1423,0.0311,0.5206,0.0992,0.1608,0.0397
c2s-last,linear,emergent,mIF<->RNA(virtual) (ORION),0.1012,0.0215,0.5185,0.0649,0.107,0.0258
c2s-last,linear,emergent,text<->RNA(virtual) (TCGA),0.0511,0.0074,0.2869,0.0238,0.0451,0.0075
c2s-last,linear,calib,H&E<->RNA(virtual) (HEST),0.0974,0.008,0.4134,0.0253,0.11,0.002
c2s-last,linear,external,H&E<->RNA (DLPFC external),0.0102,0.0021,0.1143,0.0097,0.0124,0.0025
c2s-last,mlp,trained,H&E<->RNA (HEST),0.134,0.0331,0.509,0.1054,0.1469,0.0346
c2s-last,mlp,emergent,mIF<->RNA(virtual) (ORION),0.0939,0.0119,0.5061,0.0164,0.0949,0.0119
c2s-last,mlp,emergent,text<->RNA(virtual) (TCGA),0.0553,0.0101,0.2928,0.0246,0.0463,0.011
c2s-last,mlp,calib,H&E<->RNA(virtual) (HEST),0.0946,0.007,0.4011,0.0303,0.0987,0.0088
c2s-last,mlp,external,H&E<->RNA (DLPFC external),0.0103,0.0013,0.1106,0.0054,0.0116,0.0015
aidocell,linear,trained,H&E<->RNA (HEST),0.1688,0.0331,0.5775,0.0946,0.2052,0.0443
aidocell,linear,emergent,mIF<->RNA(virtual) (ORION),0.0944,0.0067,0.4923,0.0222,0.113,0.0109
aidocell,linear,emergent,text<->RNA(virtual) (TCGA),0.0488,0.0072,0.2789,0.0175,0.0466,0.0058
aidocell,linear,calib,H&E<->RNA(virtual) (HEST),0.0829,0.0056,0.3743,0.0236,0.111,0.0125
aidocell,linear,external,H&E<->RNA (DLPFC external),0.0098,0.0028,0.0979,0.0042,0.0071,0.0014
aidocell,mlp,trained,H&E<->RNA (HEST),0.1712,0.0358,0.572,0.086,0.2076,0.0493
aidocell,mlp,emergent,mIF<->RNA(virtual) (ORION),0.0863,0.0086,0.4527,0.0178,0.1014,0.0064
aidocell,mlp,emergent,text<->RNA(virtual) (TCGA),0.047,0.0054,0.2583,0.0139,0.0394,0.0082
aidocell,mlp,calib,H&E<->RNA(virtual) (HEST),0.074,0.006,0.3331,0.0269,0.0826,0.0092
aidocell,mlp,external,H&E<->RNA (DLPFC external),0.0082,0.0013,0.0948,0.0062,0.0065,0.0032
cat:hvg+tahoex1,linear,trained,H&E<->RNA (HEST),0.1691,0.0283,0.5765,0.0979,0.2117,0.0494
cat:hvg+tahoex1,linear,emergent,mIF<->RNA(virtual) (ORION),0.1141,0.0084,0.5455,0.0356,0.157,0.0285
cat:hvg+tahoex1,linear,emergent,text<->RNA(virtual) (TCGA),0.0589,0.0049,0.3214,0.0184,0.0628,0.0069
cat:hvg+tahoex1,linear,calib,H&E<->RNA(virtual) (HEST),0.1308,0.0179,0.5041,0.0613,0.2082,0.0212
cat:hvg+tahoex1,linear,external,H&E<->RNA (DLPFC external),0.0091,0.0024,0.0974,0.0073,0.0114,0.0023
cat:hvg+se600m,linear,trained,H&E<->RNA (HEST),0.1494,0.0401,0.5454,0.1174,0.1819,0.0652
cat:hvg+se600m,linear,emergent,mIF<->RNA(virtual) (ORION),0.1223,0.025,0.565,0.075,0.1562,0.0356
cat:hvg+se600m,linear,emergent,text<->RNA(virtual) (TCGA),0.0611,0.0092,0.3403,0.0374,0.0622,0.0102
cat:hvg+se600m,linear,calib,H&E<->RNA(virtual) (HEST),0.1544,0.0285,0.5382,0.0858,0.2276,0.0551
cat:hvg+se600m,linear,external,H&E<->RNA (DLPFC external),0.0099,0.0017,0.1055,0.0082,0.0116,0.0043
cat:hvg+tahoex1+se600m,linear,trained,H&E<->RNA (HEST),0.1622,0.0399,0.5492,0.1161,0.1934,0.0636
cat:hvg+tahoex1+se600m,linear,emergent,mIF<->RNA(virtual) (ORION),0.1031,0.0161,0.524,0.0726,0.1387,0.0219
cat:hvg+tahoex1+se600m,linear,emergent,text<->RNA(virtual) (TCGA),0.0569,0.0081,0.3076,0.0195,0.0588,0.0048
cat:hvg+tahoex1+se600m,linear,calib,H&E<->RNA(virtual) (HEST),0.1359,0.02,0.5066,0.0678,0.1987,0.0365
cat:hvg+tahoex1+se600m,linear,external,H&E<->RNA (DLPFC external),0.011,0.0025,0.1104,0.0107,0.0116,0.0027
ens:hvg+tahoex1,linear,trained,H&E<->RNA (HEST),0.1811,0.032,0.5949,0.1064,0.228,0.0519
ens:hvg+tahoex1,linear,emergent,mIF<->RNA(virtual) (ORION),0.1302,0.0055,0.6044,0.0261,0.1717,0.0253
ens:hvg+tahoex1,linear,emergent,text<->RNA(virtual) (TCGA),0.0695,0.0068,0.3688,0.0208,0.0673,0.0069
ens:hvg+tahoex1,linear,calib,H&E<->RNA(virtual) (HEST),0.1826,0.0243,0.599,0.0813,0.2852,0.0361
ens:hvg+tahoex1,linear,external,H&E<->RNA (DLPFC external),0.0112,0.0023,0.1142,0.0072,0.0157,0.0031
ens:hvg+se600m,linear,trained,H&E<->RNA (HEST),0.1655,0.0335,0.5783,0.109,0.2044,0.0491
ens:hvg+se600m,linear,emergent,mIF<->RNA(virtual) (ORION),0.141,0.0144,0.6369,0.026,0.2041,0.0113
ens:hvg+se600m,linear,emergent,text<->RNA(virtual) (TCGA),0.0751,0.0035,0.3944,0.016,0.0796,0.0063
ens:hvg+se600m,linear,calib,H&E<->RNA(virtual) (HEST),0.2037,0.0279,0.6338,0.0727,0.3303,0.0327
ens:hvg+se600m,linear,external,H&E<->RNA (DLPFC external),0.0083,0.0018,0.1083,0.0089,0.0108,0.0041
ens:hvg+tahoex1+se600m,linear,trained,H&E<->RNA (HEST),0.1814,0.0346,0.6013,0.1133,0.2326,0.0542
ens:hvg+tahoex1+se600m,linear,emergent,mIF<->RNA(virtual) (ORION),0.1434,0.0092,0.6487,0.0279,0.1908,0.021
ens:hvg+tahoex1+se600m,linear,emergent,text<->RNA(virtual) (TCGA),0.0747,0.0054,0.3893,0.0108,0.0763,0.0075
ens:hvg+tahoex1+se600m,linear,calib,H&E<->RNA(virtual) (HEST),0.1909,0.026,0.6166,0.0749,0.3044,0.0324
ens:hvg+tahoex1+se600m,linear,external,H&E<->RNA (DLPFC external),0.0118,0.0015,0.1126,0.007,0.0146,0.0032
ens:hvg+tahoex1+se600m+scgpt+nicheformer,linear,trained,H&E<->RNA (HEST),0.189,0.0345,0.6164,0.1114,0.2458,0.0548
ens:hvg+tahoex1+se600m+scgpt+nicheformer,linear,emergent,mIF<->RNA(virtual) (ORION),0.1462,0.0127,0.6708,0.0288,0.1979,0.0175
ens:hvg+tahoex1+se600m+scgpt+nicheformer,linear,emergent,text<->RNA(virtual) (TCGA),0.077,0.0041,0.385,0.0132,0.0767,0.0097
ens:hvg+tahoex1+se600m+scgpt+nicheformer,linear,calib,H&E<->RNA(virtual) (HEST),0.1756,0.0224,0.587,0.0673,0.2689,0.0264
ens:hvg+tahoex1+se600m+scgpt+nicheformer,linear,external,H&E<->RNA (DLPFC external),0.0117,0.0036,0.1138,0.0086,0.014,0.0032
hvg@1,linear,trained,H&E<->RNA (HEST),0.1504,0.0279,0.5494,0.0979,0.1768,0.043
hvg@1,linear,emergent,mIF<->RNA(virtual) (ORION),0.1233,0.0109,0.5777,0.0244,0.1815,0.019
hvg@1,linear,emergent,text<->RNA(virtual) (TCGA),0.0673,0.001,0.371,0.0076,0.0768,0.0049
hvg@1,linear,calib,H&E<->RNA(virtual) (HEST),0.2048,0.0246,0.6259,0.0807,0.3574,0.0389
hvg@1,linear,external,H&E<->RNA (DLPFC external),0.0085,0.002,0.0981,0.0078,0.0112,0.0039
hvg@2,linear,trained,H&E<->RNA (HEST),0.1552,0.0273,0.5596,0.0952,0.1846,0.0461
hvg@2,linear,emergent,mIF<->RNA(virtual) (ORION),0.1144,0.0121,0.5636,0.0072,0.18,0.0132
hvg@2,linear,emergent,text<->RNA(virtual) (TCGA),0.0693,0.0039,0.3748,0.0159,0.0747,0.0092
hvg@2,linear,calib,H&E<->RNA(virtual) (HEST),0.1929,0.0291,0.6154,0.0758,0.3478,0.028
hvg@2,linear,external,H&E<->RNA (DLPFC external),0.0081,0.0021,0.1055,0.009,0.0111,0.0017
hvg@3,linear,trained,H&E<->RNA (HEST),0.1516,0.0307,0.5566,0.1074,0.1839,0.0537
hvg@3,linear,emergent,mIF<->RNA(virtual) (ORION),0.1157,0.0105,0.5707,0.0342,0.1776,0.0194
hvg@3,linear,emergent,text<->RNA(virtual) (TCGA),0.0686,0.0032,0.3714,0.0168,0.0751,0.0077
hvg@3,linear,calib,H&E<->RNA(virtual) (HEST),0.1938,0.0347,0.6093,0.0753,0.3454,0.0494
hvg@3,linear,external,H&E<->RNA (DLPFC external),0.0088,0.0014,0.1029,0.0075,0.01,0.0032
hvg@4,linear,trained,H&E<->RNA (HEST),0.153,0.0262,0.561,0.0969,0.1855,0.0457
hvg@4,linear,emergent,mIF<->RNA(virtual) (ORION),0.1192,0.0068,0.5853,0.0347,0.1816,0.0132
hvg@4,linear,emergent,text<->RNA(virtual) (TCGA),0.0693,0.0034,0.3762,0.0119,0.0762,0.0038
hvg@4,linear,calib,H&E<->RNA(virtual) (HEST),0.2005,0.0413,0.6293,0.0924,0.358,0.0639
hvg@4,linear,external,H&E<->RNA (DLPFC external),0.0071,0.0017,0.1007,0.0068,0.0114,0.0017
genept-bmc,linear,trained,H&E<->RNA (HEST),0.1301,0.0197,0.5403,0.0883,0.1483,0.0288
genept-bmc,linear,emergent,mIF<->RNA(virtual) (ORION),0.0754,0.0057,0.4393,0.0136,0.0962,0.0078
genept-bmc,linear,emergent,text<->RNA(virtual) (TCGA),0.0519,0.0042,0.2982,0.0145,0.0572,0.006
genept-bmc,linear,calib,H&E<->RNA(virtual) (HEST),0.0864,0.0052,0.4084,0.0292,0.1142,0.0121
genept-bmc,linear,external,H&E<->RNA (DLPFC external),0.0099,0.0019,0.1087,0.0129,0.0118,0.0035
ens:hvg+hvg@1,linear,trained,H&E<->RNA (HEST),0.1573,0.0289,0.5637,0.1039,0.1857,0.0437
ens:hvg+hvg@1,linear,emergent,mIF<->RNA(virtual) (ORION),0.1283,0.0068,0.5945,0.0218,0.1957,0.0177
ens:hvg+hvg@1,linear,emergent,text<->RNA(virtual) (TCGA),0.0704,0.0023,0.3834,0.0137,0.0792,0.0033
ens:hvg+hvg@1,linear,calib,H&E<->RNA(virtual) (HEST),0.2082,0.0272,0.6321,0.0812,0.3727,0.0469
ens:hvg+hvg@1,linear,external,H&E<->RNA (DLPFC external),0.008,0.0019,0.1045,0.005,0.0119,0.0047
ens:hvg+hvg@1+hvg@2+hvg@3+hvg@4,linear,trained,H&E<->RNA (HEST),0.1608,0.0295,0.5723,0.1034,0.198,0.0534
ens:hvg+hvg@1+hvg@2+hvg@3+hvg@4,linear,emergent,mIF<->RNA(virtual) (ORION),0.1317,0.0078,0.6063,0.0205,0.2005,0.0125
ens:hvg+hvg@1+hvg@2+hvg@3+hvg@4,linear,emergent,text<->RNA(virtual) (TCGA),0.0731,0.0022,0.3918,0.0114,0.0834,0.0052
ens:hvg+hvg@1+hvg@2+hvg@3+hvg@4,linear,calib,H&E<->RNA(virtual) (HEST),0.2079,0.0301,0.6354,0.0816,0.3787,0.0446
ens:hvg+hvg@1+hvg@2+hvg@3+hvg@4,linear,external,H&E<->RNA (DLPFC external),0.0084,0.0016,0.1055,0.0093,0.0105,0.0015
ens:hvg+aidocell,linear,trained,H&E<->RNA (HEST),0.1846,0.0309,0.6045,0.0969,0.231,0.0467
ens:hvg+aidocell,linear,emergent,mIF<->RNA(virtual) (ORION),0.129,0.0061,0.6157,0.0268,0.1888,0.015
ens:hvg+aidocell,linear,emergent,text<->RNA(virtual) (TCGA),0.0737,0.0052,0.3791,0.0081,0.079,0.0057
ens:hvg+aidocell,linear,calib,H&E<->RNA(virtual) (HEST),0.1789,0.0204,0.5972,0.0675,0.3042,0.0336
ens:hvg+aidocell,linear,external,H&E<->RNA (DLPFC external),0.0098,0.002,0.102,0.0129,0.0103,0.0035
ens:hvg+aidocell+se600m,linear,trained,H&E<->RNA (HEST),0.1855,0.032,0.6091,0.104,0.2349,0.0508
ens:hvg+aidocell+se600m,linear,emergent,mIF<->RNA(virtual) (ORION),0.1439,0.009,0.6545,0.0324,0.2096,0.0105
ens:hvg+aidocell+se600m,linear,emergent,text<->RNA(virtual) (TCGA),0.0773,0.004,0.3978,0.0103,0.083,0.0055
ens:hvg+aidocell+se600m,linear,calib,H&E<->RNA(virtual) (HEST),0.187,0.0215,0.6044,0.0589,0.31,0.0301
ens:hvg+aidocell+se600m,linear,external,H&E<->RNA (DLPFC external),0.0106,0.0026,0.1072,0.009,0.0081,0.002
ens:hvg+tahoex1+se600m+aidocell,linear,trained,H&E<->RNA (HEST),0.1921,0.0352,0.6129,0.1078,0.2463,0.0544
ens:hvg+tahoex1+se600m+aidocell,linear,emergent,mIF<->RNA(virtual) (ORION),0.1422,0.0065,0.655,0.0315,0.1978,0.0179
ens:hvg+tahoex1+se600m+aidocell,linear,emergent,text<->RNA(virtual) (TCGA),0.0755,0.0046,0.3896,0.0122,0.0773,0.0085
ens:hvg+tahoex1+se600m+aidocell,linear,calib,H&E<->RNA(virtual) (HEST),0.1741,0.0192,0.5886,0.0584,0.293,0.0323
ens:hvg+tahoex1+se600m+aidocell,linear,external,H&E<->RNA (DLPFC external),0.0119,0.0018,0.1124,0.0068,0.0118,0.0032
ens:hvg+tahoex1+se600m+scgpt+nicheformer+aidocell+geneformer+c2s+genept-bge+genept-bmc,linear,trained,H&E<->RNA (HEST),0.1991,0.0358,0.6297,0.1045,0.2632,0.0568
ens:hvg+tahoex1+se600m+scgpt+nicheformer+aidocell+geneformer+c2s+genept-bge+genept-bmc,linear,emergent,mIF<->RNA(virtual) (ORION),0.1484,0.0089,0.6769,0.0397,0.2124,0.0216
ens:hvg+tahoex1+se600m+scgpt+nicheformer+aidocell+geneformer+c2s+genept-bge+genept-bmc,linear,emergent,text<->RNA(virtual) (TCGA),0.0778,0.002,0.3926,0.0097,0.0842,0.005
ens:hvg+tahoex1+se600m+scgpt+nicheformer+aidocell+geneformer+c2s+genept-bge+genept-bmc,linear,calib,H&E<->RNA(virtual) (HEST),0.1634,0.0177,0.5588,0.0573,0.2622,0.0352
ens:hvg+tahoex1+se600m+scgpt+nicheformer+aidocell+geneformer+c2s+genept-bge+genept-bmc,linear,external,H&E<->RNA (DLPFC external),0.0119,0.0026,0.107,0.0074,0.0121,0.0028